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- '''[[TubeTK|Home]]''' *[[TubeTK/About|About]]14 KB (1,949 words) - 22:01, 31 May 2017
- There are two patient data sets. For each of them, there are datasets for 4 different modalities for b ...cans that are used to differentiate fat from water. The difference of this data set from T1 is that they show fat darker, and water lighter.5 KB (735 words) - 18:35, 26 July 2013
- 0 bytes (0 words) - 14:55, 26 July 2013
Page text matches
- '''[[TubeTK|Home]]''' *[[TubeTK/About|About]]1,016 bytes (129 words) - 18:24, 26 July 2013
- '''[[TubeTK|Home]]''' *[[TubeTK/About|About]]1 KB (192 words) - 13:32, 6 January 2015
- '''[[TubeTK|Home]]''' *[[TubeTK/About|About]]2 KB (288 words) - 04:35, 4 December 2015
- '''[[TubeTK|Home]]''' *[[TubeTK/About|About]]5 KB (388 words) - 20:36, 13 October 2015
- |+ [[image:TubeTK_Header.jpg|1000px|link=TubeTK]] '''[[TubeTK|Home]]'''2 KB (248 words) - 16:44, 19 December 2015
- '''[[TubeTK|Home]]''' *[[TubeTK/About|About]]3 KB (368 words) - 14:20, 6 January 2015
- # opcontrol: controls data collection # opreport: retrieves profile data3 KB (367 words) - 18:39, 26 July 2013
- * Request UCLA Data: Gabe * Process MRI data for ultrasound: Ilknur326 bytes (44 words) - 18:53, 26 July 2013
- * Location of data ** TubeTK_INPUT_DATA = tubetk/Data866 bytes (105 words) - 18:44, 26 July 2013
- ...e successive 3D positions of the centerline of the tubes (example : tubeTK/Data/Branch-truth.tre) ...xel intensity is 0 outside the ROI and ≠0 inside the ROI (example : tubeTK/Data/Branch.n010.mha)1 KB (144 words) - 13:09, 6 January 2015
- ..., we have created a dedicated [http://midas3.kitware.com/midas/community/7 TubeTK Midas community] In the TubeTK community, we have two main types of folders3 KB (448 words) - 18:39, 26 July 2013
- * Duke data (MIA) [[Category:TubeTK Events and Meetings|2011.07.28]]179 bytes (21 words) - 18:54, 26 July 2013
- = Projects that build on TubeTK = * TubeTK -> Slicer1 KB (168 words) - 18:50, 26 July 2013
- |+ [[image:TubeTK_Header.jpg|1000px|link=TubeTK]] '''[[TubeTK|Home]]'''3 KB (458 words) - 14:49, 26 July 2013
- ** register CT data ** documentation on TubeTK wiki1 KB (139 words) - 18:49, 26 July 2013
- '''[[TubeTK|Home]]''' *[[TubeTK/About|About]]3 KB (393 words) - 18:31, 26 July 2013
- * Worked out framework for registering Ryan's vessel data - extract .tre from .txt gold standard motion field, and register to image * Added small test in TubeTK to convert a .tre to an image, given an example image2 KB (225 words) - 18:48, 26 July 2013
- ** With input data = Branch-truth.tre (from tubetk/Data) ** Grassroots data visualization2 KB (285 words) - 18:49, 26 July 2013
- ..., transform, device control and monitoring command, and other user-defined data types. Example use cases ...ruments and packages them in OpenIGTLink message format and then sends the data over the network connection using OpenIGTLink protocol to the computer runn5 KB (672 words) - 18:56, 26 July 2013
- * Data acquisition (Surgical) *** Copy data from machine at Duke after surgery1 KB (128 words) - 18:46, 26 July 2013
- = Data = [[Category:TubeTK Events and Meetings|2010.12.09]]434 bytes (78 words) - 18:51, 26 July 2013
- |+ [[image:TubeTK_Header.jpg|1000px|TubeTK]] '''[[TubeTK|Home]]'''6 KB (840 words) - 12:31, 9 May 2016
- Description: Center phantom data (e.g., image, label map) with respect Specifies that the input phantom data contains discrete labels.2 KB (203 words) - 18:55, 7 January 2015
- * Primary goal: Data from Duke for BWH ** Determine what is necessary to record data sent to OpenIGTLink from VectorVision system4 KB (459 words) - 18:45, 26 July 2013
- ** tests on smaller images = smaller data to be distributed + faster tests [[Category:TubeTK Events and Meetings|2010.11.16]]774 bytes (102 words) - 18:50, 26 July 2013
- There are two ways of building TubeTK: ...ocessing data using the command-line or scripts, it is sufficient to build TubeTK as a (Option 2) Stand-Alone Build.10 KB (1,548 words) - 12:11, 1 November 2016
- ** tubetk/CMake/DashboardScripts tubetk/CMake/CTestCustom... ** Retinal data5 KB (626 words) - 18:45, 26 July 2013
- *[[FRAT/Data | Data and Publications]] ...ete install of TubeTK. For build instructions, go [http://www.vtk.org/Wiki/TubeTK/Development/Build here]. For FFTW installation instructions, go [http://www3 KB (495 words) - 22:17, 11 August 2011
- * Primary goal: Data from Duke for BWH ** Determine what is necessary to record data sent to OpenIGTLink from VectorVision system2 KB (270 words) - 18:45, 26 July 2013
- ...tive PDF segmenter is to be used with 3D Slicer (see the [[TubeTK/Slicer | TubeTK with Slicer]] page for setup instructions). Its implementation can be found in TubeTK/Applications/SlicerModules/InteractivePDFSegmenter.py.6 KB (789 words) - 13:09, 6 January 2015
- Description: Renders ITK tube SpatialObject data structures into Acknowledgements: This work is part of the TubeTK project at Kitware.1 KB (158 words) - 18:43, 7 January 2015
- ** Extract organ border normals from input data [[Category:TubeTK Events and Meetings|2010.10.14]]1 KB (140 words) - 18:48, 26 July 2013
- ...<em>NeuralNav</em> toolkit that provides a common API for fetching tracker data and intra-operative images from commercial (VectorVision by BrainLAB) and r * [[TubeTK]]4 KB (487 words) - 18:38, 5 December 2012
- ...ware options on the probe can be manipulated, and both B-Mode and RF image data collected. ...native C++ scan conversion. Direct visualization is possible, or the image data can be streamed to OpenIGTLink-compatible devices such as 3D Slicer or 3D S2 KB (226 words) - 16:43, 10 November 2014
- There are two patient data sets. For each of them, there are datasets for 4 different modalities for b ...cans that are used to differentiate fat from water. The difference of this data set from T1 is that they show fat darker, and water lighter.5 KB (735 words) - 18:35, 26 July 2013
- ...ceive retrospectively acquired AVM patient data so we will be getting this data very soon. Ricardo will set up a private repository for the AVM data in our Midas server.5 KB (789 words) - 17:55, 15 September 2014
- * Dashboard: https://www.kitware.com/CDash/index.php?project=TubeTK * Wiki Documentation: http://public.kitware.com/Wiki/TubeTK4 KB (453 words) - 18:48, 26 July 2013
- Kitware can do multivariant classification. PDFSegmenter is available in TubeTK. This method is semiautomatic, multivariant, and multiclass (2 types of ede # Data: At least 4-5 channels (T1, T2, SWI, DTI, GRE) are available. They are good4 KB (583 words) - 18:53, 26 July 2013
- '''[[TubeTK|Home]]''' *[[TubeTK/About|About]]14 KB (1,949 words) - 22:01, 31 May 2017
- tracker data in InnerOptic's format to the format used by the Plus Acknowledgements: This work is part of the TubeTK project at Kitware.2 KB (293 words) - 18:31, 7 January 2015
- TubeTK provides algorithms for deformable registration of images depicting multipl TubeTK provides deformable image registration incorporating a deformation field re23 KB (3,361 words) - 13:09, 6 January 2015
- = TubeTK Developer's Guide = ...ccepted coding style for TubeTK. Developers who wish to contribute code to TubeTK should read and adhere to the standards described here.24 KB (3,564 words) - 23:01, 10 May 2016
- ...methods are now available in <b>TubeTK</b> (http://public.kitware.com/Wiki/TubeTK), and interfaces for running them within Slicer are under development. # Using an intuitive scene-based data structure to manage the objects to be viewed and processed by an applicatio3 KB (443 words) - 13:53, 21 March 2012
- == TubeTK Approach: Model-to-Image Registration == * Viewed as a optimization problem with discretely sampled data22 KB (3,107 words) - 18:24, 26 July 2013
