ITK/Tcons/Agendas/2011 01 04
How to Join the Tcon
Number to Call
- 1-800-728-9607 (in the US) or
- +1 9139049873 (international)
- access code 6815251
- Meeting link
February Meeting in Boston
- Set for February 2-3, 2011 in Boston at Harvard Medical School.
Please register for the meeting ASAP. Here is the link for the registration:
Changing Tcon Day/Time
We ran a survey:
Wednesday at 10am EST seems to be the time that matches all the people who responded the survey.
- Dashboard Status - Today's Dashboard
Lingering Failing Tests ( Feet + Heat )
- DICOM Tests tkGDCMSeriesStreamReadImageWrite3 and tkGDCMSeriesStreamReadImageWrite4
- Malaterre/Roden status update
- Able to reproduce the problem?
- LabelMap tests failing on certain Windows systems
- Who is responsible to address?
- KWStyle failing
- Add KWStyle tests to CDash@Home
New Year's Resolutions
- Keep Valgrind errors at Zero.
- There are only two Valgrind errors now.
- They are related to loading Dynamic Libraries and Object Factories.
- Date: Friday - January 7th 2011
Major topics to be merged
- Fixing Windows 64bits problem with "long"...
- Committed !!
- A couple of warning and tests to be addressed
- Data class additions/hierarchies?
- TimeStamps (will try)
- Date: January 28th ( hard deadline before Winter Design Meeting )
Major topics to be completed
- GPU Draft Implementation
- SimpleITK Draft Implementation
- MICCAI 2011 Call for Workshops and Tutorials
- Note that we already have an accepted tutorial for CVPR 2011 on the use of ITK+OpenCV
- Project management software
- SimpleITK Redmine instance on EC2
We had a tcon on December 16th.
Cone Beam CT
- Use case with Cone Beam CT datasets uploaded to MIDAS.
- Downloading through web interface is at the item level, for larger data sets (collections/communities) kitware is developing a desktop application.
Gerrit patch intended to facilitate the use of BrainWeb datasets:
Migration Guide Process
- Users Migration Guide (Gabe Hart)
- Example XML
- Code generations
- Using Lua and JSON
- Interfacing to
- ImageJ / Fiji
- Summary of tcon with NVIDIA from Monday Nov 22 at 1pm EST (Won Ki)
- GPU Acceleration - V4
- Next tcon with NVidia, scheduled for Thursday Jan 6th 1pm EST
Dan and Mathieu to report
Image Registration Revision
- Start sending patches to Gerrit
- New CompositeTransform class is underway
- New DeformationFieldTransform class is underway
- Transform IO will be adjusted accordingly
- Refactoring page
Time Stamp Proposal
- Had a Tcon about modularization on Dec 3 .
The initial partition seems to be good to start with.
- Brad King worked on cmake packaging prototypes
- Xiaoxiao is working on building the modular ITK module by module. Details of the status can be found in .
- Brad King addressed the int issues
- Currently at
git fetch git://kwsource.kitwarein.com/~bradking/itk/bradkings-itk.git +libtiff4beta6:libtiff4beta6
Sequestered Reference Applications
We have already made significant changes, and they are not being recorded yet. It is time to setup these reference applications.
- V3D Plugins
- 3.6 sequestered in Github
- 4.0 to be adjusted now during the NAMIC AHM meeting.
- Insight Applications now submitting
- Broken: need to use it as an example for the Migration Guide.
Development Versions following ITKv4
- Nightly build use the current ITKv4.
- IGSTK, after SPIE'11 (IGSTK5.0)
- Insight Applications (ITKApps from v3.20)
- ITK tests from v3.20
- Status (Alex)
ITK Readers for Microscopy formats
- There's a need for readers in the microscopy community in order to be able to use ITK
- Zeiss (LSM and ZVI)
- Leica (LIF)
- Olympus (OIB)
- Nikon ()
- BioFormats has readers and example files for these. It is Java with C++ bindings for ITK, BUT it's GPL.