[vtkusers] Filling in blood vessels

Kevin H. Hobbs hobbsk at ohiou.edu
Mon Dec 20 15:34:35 EST 2010


On 12/20/2010 03:15 PM, Gib Bogle wrote:
> Are you aware of a simple way to take a
> stack of TIFF files and convert it into a form readable by ITK-snap?
> 
I just created 6 tiff 100x100 files in the gimp.

I wrote a mhd file :

$ cat stack.mhd
NDims = 3
DimSize = 100 100 6
ElementSpacing = 1 1 20
ElementType = MET_UCHAR
ElementDataFile = LIST 2
1.tiff
2.tiff
3.tiff
4.tiff
5.tiff
6.tiff

I started paraview, opened stack.mhd and volume rendered it (for kicks)
and all was well.

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