[Paraview] [EXTERNAL] Re: Superbuild, CGNS and debug

Utkarsh Ayachit utkarsh.ayachit at kitware.com
Fri Mar 13 23:07:42 EDT 2015


Hmm...odd...not entirely sure why. So this worked with the same
settings but "Release" mode earlier and now it's failing with "Debug"?

Utkarsh

On Fri, Mar 13, 2015 at 9:02 PM, Scott, W Alan <wascott at sandia.gov> wrote:
> I wasn't very clear, was I?  :-)
>
> I am trying to do a superbuild.  I have enabled CMAKE_BUILD_TYPE:STRING=Debug and ENABLE_cgns:BOOL=ON (along with lots of other stuff).  I blow away my previous build. I run cmake.  I then try to compile the superbuild, and it dies as shown below.
>
> Attaching the root CMakeCache.txt file from the superbuild.
>
> Alan
>
>
>
> -----Original Message-----
> From: Utkarsh Ayachit [mailto:utkarsh.ayachit at kitware.com]
> Sent: Friday, March 13, 2015 6:51 PM
> To: Scott, W Alan
> Cc: paraview at paraview.org
> Subject: [EXTERNAL] Re: [Paraview] Superbuild, CGNS and debug
>
> I don't follow...what do you mean by "get a debugger into a CGNS build of ParaView"? You are getting these errors when building ParaView or running in in a debugger?
>
> On Fri, Mar 13, 2015 at 8:19 PM, Scott, W Alan <wascott at sandia.gov> wrote:
>> I am trying to get a debugger into a CGNS build of ParaView.  CGNS
>> builds seems to be dying trying to link to HDF5.  Has anyone else seen
>> this?  Any ideas how to compile debug with CGNS and the Superbuild?
>>
>> Here is some of the errors that I am seeing:
>>
>> checking whether build environment is sane... ../libcgns.so.3.1:
>> undefined reference to `H5T_NATIVE_INT32_g'
>> ../libcgns.so.3.1: undefined reference to `H5P_CLS_FILE_CREATE_g'
>> ../libcgns.so.3.1: undefined reference to `H5Pcreate'
>> ../libcgns.so.3.1: undefined reference to `H5Tcopy'
>> ../libcgns.so.3.1: undefined reference to `H5T_NATIVE_UINT32_g'
>> ../libcgns.so.3.1: undefined reference to `H5Sget_simple_extent_dims'
>> ../libcgns.so.3.1: undefined reference to `H5Eset_auto2'
>> ../libcgns.so.3.1: undefined reference to `H5Sget_simple_extent_ndims'
>> ../libcgns.so.3.1: undefined reference to `H5Aget_type'
>> ../libcgns.so.3.1: undefined reference to `H5Fcreate'
>> ../libcgns.so.3.1: undefined reference to `H5Sset_extent_simple'
>> ../libcgns.so.3.1: undefined reference to `H5Sclose'
>> ../libcgns.so.3.1: undefined reference to `H5T_NATIVE_SCHAR_g'
>> ../libcgns.so.3.1: undefined reference to `H5Aopen_name'
>> ../libcgns.so.3.1: undefined reference to `H5Gunlink'
>> ../libcgns.so.3.1: undefined reference to `H5Lget_val'
>> ../libcgns.so.3.1: undefined reference to `H5Tget_native_type'
>> ../libcgns.so.3.1: undefined reference to `H5Acreate2'
>> ../libcgns.so.3.1: undefined reference to `H5Aclose'
>> ../libcgns.so.3.1: undefined reference to `H5Pset_deflate'
>> ../libcgns.so.3.1: undefined reference to `H5T_C_S1_g'
>> ../libcgns.so.3.1: undefined reference to `H5Tset_precision'
>> ../libcgns.so.3.1: undefined reference to `H5Dopen2'
>> ../libcgns.so.3.1: undefined reference to `H5Dget_type'
>> ../libcgns.so.3.1: undefined reference to `H5T_NATIVE_FLOAT_g'
>> ../libcgns.so.3.1: undefined reference to `H5Lunpack_elink_val'
>> ../libcgns.so.3.1: undefined reference to `H5Dwrite'
>> ../libcgns.so.3.1: undefined reference to `H5Lcreate_external'
>> ../libcgns.so.3.1: undefined reference to `H5Dget_storage_size'
>> ../libcgns.so.3.1: undefined reference to `H5Screate_simple'
>> ../libcgns.so.3.1: undefined reference to `H5Aread'
>> ../libcgns.so.3.1: undefined reference to `H5check_version'
>> ../libcgns.so.3.1: undefined reference to `H5Iget_name'
>> ../libcgns.so.3.1: undefined reference to `H5Lis_registered'
>> ../libcgns.so.3.1: undefined reference to `H5Fget_obj_ids'
>> ../libcgns.so.3.1: undefined reference to `H5P_CLS_GROUP_CREATE_g'
>> ../libcgns.so.3.1: undefined reference to `H5Gcreate2'
>> ../libcgns.so.3.1: undefined reference to `H5Giterate'
>> ../libcgns.so.3.1: undefined reference to `H5Tget_size'
>> ../libcgns.so.3.1: undefined reference to `H5T_NATIVE_UCHAR_g'
>> ../libcgns.so.3.1: undefined reference to `H5Screate'
>> ../libcgns.so.3.1: undefined reference to `H5T_IEEE_F32BE_g'
>> ../libcgns.so.3.1: undefined reference to `H5Literate'
>> ../libcgns.so.3.1: undefined reference to `H5Gopen2'
>> ../libcgns.so.3.1: undefined reference to `H5Dset_extent'
>> ../libcgns.so.3.1: undefined reference to `H5T_IEEE_F64BE_g'
>> ../libcgns.so.3.1: undefined reference to `H5Dget_space'
>> ../libcgns.so.3.1: undefined reference to `H5Dclose'
>> ../libcgns.so.3.1: undefined reference to `H5P_CLS_FILE_ACCESS_g'
>> ../libcgns.so.3.1: undefined reference to `H5T_NATIVE_UINT64_g'
>>
>> Thanks,
>>
>> Alan
>>
>>
>>
>>
>> _______________________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at
>> http://www.kitware.com/opensource/opensource.html
>>
>> Please keep messages on-topic and check the ParaView Wiki at:
>> http://paraview.org/Wiki/ParaView
>>
>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/paraview
>>


More information about the ParaView mailing list