[Paraview] [EXTERNAL] Re: Superbuild, CGNS and debug

[Scott, W Alan]

I wasn't very clear, was I?  :-)

I am trying to do a superbuild.  I have enabled CMAKE_BUILD_TYPE:STRING=Debug and ENABLE_cgns:BOOL=ON (along with lots of other stuff).  I blow away my previous build. I run cmake.  I then try to compile the superbuild, and it dies as shown below.

Attaching the root CMakeCache.txt file from the superbuild.

Alan



-----Original Message-----
From: Utkarsh Ayachit [mailto:utkarsh.ayachit at kitware.com] 
Sent: Friday, March 13, 2015 6:51 PM
To: Scott, W Alan
Cc: paraview at paraview.org
Subject: [EXTERNAL] Re: [Paraview] Superbuild, CGNS and debug

I don't follow...what do you mean by "get a debugger into a CGNS build of ParaView"? You are getting these errors when building ParaView or running in in a debugger?

On Fri, Mar 13, 2015 at 8:19 PM, Scott, W Alan <wascott at sandia.gov> wrote:
> I am trying to get a debugger into a CGNS build of ParaView.  CGNS 
> builds seems to be dying trying to link to HDF5.  Has anyone else seen 
> this?  Any ideas how to compile debug with CGNS and the Superbuild?
>
> Here is some of the errors that I am seeing:
>
> checking whether build environment is sane... ../libcgns.so.3.1: 
> undefined reference to `H5T_NATIVE_INT32_g'
> ../libcgns.so.3.1: undefined reference to `H5P_CLS_FILE_CREATE_g'
> ../libcgns.so.3.1: undefined reference to `H5Pcreate'
> ../libcgns.so.3.1: undefined reference to `H5Tcopy'
> ../libcgns.so.3.1: undefined reference to `H5T_NATIVE_UINT32_g'
> ../libcgns.so.3.1: undefined reference to `H5Sget_simple_extent_dims'
> ../libcgns.so.3.1: undefined reference to `H5Eset_auto2'
> ../libcgns.so.3.1: undefined reference to `H5Sget_simple_extent_ndims'
> ../libcgns.so.3.1: undefined reference to `H5Aget_type'
> ../libcgns.so.3.1: undefined reference to `H5Fcreate'
> ../libcgns.so.3.1: undefined reference to `H5Sset_extent_simple'
> ../libcgns.so.3.1: undefined reference to `H5Sclose'
> ../libcgns.so.3.1: undefined reference to `H5T_NATIVE_SCHAR_g'
> ../libcgns.so.3.1: undefined reference to `H5Aopen_name'
> ../libcgns.so.3.1: undefined reference to `H5Gunlink'
> ../libcgns.so.3.1: undefined reference to `H5Lget_val'
> ../libcgns.so.3.1: undefined reference to `H5Tget_native_type'
> ../libcgns.so.3.1: undefined reference to `H5Acreate2'
> ../libcgns.so.3.1: undefined reference to `H5Aclose'
> ../libcgns.so.3.1: undefined reference to `H5Pset_deflate'
> ../libcgns.so.3.1: undefined reference to `H5T_C_S1_g'
> ../libcgns.so.3.1: undefined reference to `H5Tset_precision'
> ../libcgns.so.3.1: undefined reference to `H5Dopen2'
> ../libcgns.so.3.1: undefined reference to `H5Dget_type'
> ../libcgns.so.3.1: undefined reference to `H5T_NATIVE_FLOAT_g'
> ../libcgns.so.3.1: undefined reference to `H5Lunpack_elink_val'
> ../libcgns.so.3.1: undefined reference to `H5Dwrite'
> ../libcgns.so.3.1: undefined reference to `H5Lcreate_external'
> ../libcgns.so.3.1: undefined reference to `H5Dget_storage_size'
> ../libcgns.so.3.1: undefined reference to `H5Screate_simple'
> ../libcgns.so.3.1: undefined reference to `H5Aread'
> ../libcgns.so.3.1: undefined reference to `H5check_version'
> ../libcgns.so.3.1: undefined reference to `H5Iget_name'
> ../libcgns.so.3.1: undefined reference to `H5Lis_registered'
> ../libcgns.so.3.1: undefined reference to `H5Fget_obj_ids'
> ../libcgns.so.3.1: undefined reference to `H5P_CLS_GROUP_CREATE_g'
> ../libcgns.so.3.1: undefined reference to `H5Gcreate2'
> ../libcgns.so.3.1: undefined reference to `H5Giterate'
> ../libcgns.so.3.1: undefined reference to `H5Tget_size'
> ../libcgns.so.3.1: undefined reference to `H5T_NATIVE_UCHAR_g'
> ../libcgns.so.3.1: undefined reference to `H5Screate'
> ../libcgns.so.3.1: undefined reference to `H5T_IEEE_F32BE_g'
> ../libcgns.so.3.1: undefined reference to `H5Literate'
> ../libcgns.so.3.1: undefined reference to `H5Gopen2'
> ../libcgns.so.3.1: undefined reference to `H5Dset_extent'
> ../libcgns.so.3.1: undefined reference to `H5T_IEEE_F64BE_g'
> ../libcgns.so.3.1: undefined reference to `H5Dget_space'
> ../libcgns.so.3.1: undefined reference to `H5Dclose'
> ../libcgns.so.3.1: undefined reference to `H5P_CLS_FILE_ACCESS_g'
> ../libcgns.so.3.1: undefined reference to `H5T_NATIVE_UINT64_g'
>
> Thanks,
>
> Alan
>
>
>
>
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