[Paraview] [EXTERNAL] Re: Superbuild, CGNS and debug

Scott, W Alan wascott at sandia.gov
Mon Mar 16 12:54:31 EDT 2015


Correct.

Alan

-----Original Message-----
From: Utkarsh Ayachit [mailto:utkarsh.ayachit at kitware.com] 
Sent: Friday, March 13, 2015 9:08 PM
To: Scott, W Alan
Cc: paraview at paraview.org
Subject: Re: [EXTERNAL] Re: [Paraview] Superbuild, CGNS and debug

Hmm...odd...not entirely sure why. So this worked with the same settings but "Release" mode earlier and now it's failing with "Debug"?

Utkarsh

On Fri, Mar 13, 2015 at 9:02 PM, Scott, W Alan <wascott at sandia.gov> wrote:
> I wasn't very clear, was I?  :-)
>
> I am trying to do a superbuild.  I have enabled CMAKE_BUILD_TYPE:STRING=Debug and ENABLE_cgns:BOOL=ON (along with lots of other stuff).  I blow away my previous build. I run cmake.  I then try to compile the superbuild, and it dies as shown below.
>
> Attaching the root CMakeCache.txt file from the superbuild.
>
> Alan
>
>
>
> -----Original Message-----
> From: Utkarsh Ayachit [mailto:utkarsh.ayachit at kitware.com]
> Sent: Friday, March 13, 2015 6:51 PM
> To: Scott, W Alan
> Cc: paraview at paraview.org
> Subject: [EXTERNAL] Re: [Paraview] Superbuild, CGNS and debug
>
> I don't follow...what do you mean by "get a debugger into a CGNS build of ParaView"? You are getting these errors when building ParaView or running in in a debugger?
>
> On Fri, Mar 13, 2015 at 8:19 PM, Scott, W Alan <wascott at sandia.gov> wrote:
>> I am trying to get a debugger into a CGNS build of ParaView.  CGNS 
>> builds seems to be dying trying to link to HDF5.  Has anyone else 
>> seen this?  Any ideas how to compile debug with CGNS and the Superbuild?
>>
>> Here is some of the errors that I am seeing:
>>
>> checking whether build environment is sane... ../libcgns.so.3.1:
>> undefined reference to `H5T_NATIVE_INT32_g'
>> ../libcgns.so.3.1: undefined reference to `H5P_CLS_FILE_CREATE_g'
>> ../libcgns.so.3.1: undefined reference to `H5Pcreate'
>> ../libcgns.so.3.1: undefined reference to `H5Tcopy'
>> ../libcgns.so.3.1: undefined reference to `H5T_NATIVE_UINT32_g'
>> ../libcgns.so.3.1: undefined reference to `H5Sget_simple_extent_dims'
>> ../libcgns.so.3.1: undefined reference to `H5Eset_auto2'
>> ../libcgns.so.3.1: undefined reference to `H5Sget_simple_extent_ndims'
>> ../libcgns.so.3.1: undefined reference to `H5Aget_type'
>> ../libcgns.so.3.1: undefined reference to `H5Fcreate'
>> ../libcgns.so.3.1: undefined reference to `H5Sset_extent_simple'
>> ../libcgns.so.3.1: undefined reference to `H5Sclose'
>> ../libcgns.so.3.1: undefined reference to `H5T_NATIVE_SCHAR_g'
>> ../libcgns.so.3.1: undefined reference to `H5Aopen_name'
>> ../libcgns.so.3.1: undefined reference to `H5Gunlink'
>> ../libcgns.so.3.1: undefined reference to `H5Lget_val'
>> ../libcgns.so.3.1: undefined reference to `H5Tget_native_type'
>> ../libcgns.so.3.1: undefined reference to `H5Acreate2'
>> ../libcgns.so.3.1: undefined reference to `H5Aclose'
>> ../libcgns.so.3.1: undefined reference to `H5Pset_deflate'
>> ../libcgns.so.3.1: undefined reference to `H5T_C_S1_g'
>> ../libcgns.so.3.1: undefined reference to `H5Tset_precision'
>> ../libcgns.so.3.1: undefined reference to `H5Dopen2'
>> ../libcgns.so.3.1: undefined reference to `H5Dget_type'
>> ../libcgns.so.3.1: undefined reference to `H5T_NATIVE_FLOAT_g'
>> ../libcgns.so.3.1: undefined reference to `H5Lunpack_elink_val'
>> ../libcgns.so.3.1: undefined reference to `H5Dwrite'
>> ../libcgns.so.3.1: undefined reference to `H5Lcreate_external'
>> ../libcgns.so.3.1: undefined reference to `H5Dget_storage_size'
>> ../libcgns.so.3.1: undefined reference to `H5Screate_simple'
>> ../libcgns.so.3.1: undefined reference to `H5Aread'
>> ../libcgns.so.3.1: undefined reference to `H5check_version'
>> ../libcgns.so.3.1: undefined reference to `H5Iget_name'
>> ../libcgns.so.3.1: undefined reference to `H5Lis_registered'
>> ../libcgns.so.3.1: undefined reference to `H5Fget_obj_ids'
>> ../libcgns.so.3.1: undefined reference to `H5P_CLS_GROUP_CREATE_g'
>> ../libcgns.so.3.1: undefined reference to `H5Gcreate2'
>> ../libcgns.so.3.1: undefined reference to `H5Giterate'
>> ../libcgns.so.3.1: undefined reference to `H5Tget_size'
>> ../libcgns.so.3.1: undefined reference to `H5T_NATIVE_UCHAR_g'
>> ../libcgns.so.3.1: undefined reference to `H5Screate'
>> ../libcgns.so.3.1: undefined reference to `H5T_IEEE_F32BE_g'
>> ../libcgns.so.3.1: undefined reference to `H5Literate'
>> ../libcgns.so.3.1: undefined reference to `H5Gopen2'
>> ../libcgns.so.3.1: undefined reference to `H5Dset_extent'
>> ../libcgns.so.3.1: undefined reference to `H5T_IEEE_F64BE_g'
>> ../libcgns.so.3.1: undefined reference to `H5Dget_space'
>> ../libcgns.so.3.1: undefined reference to `H5Dclose'
>> ../libcgns.so.3.1: undefined reference to `H5P_CLS_FILE_ACCESS_g'
>> ../libcgns.so.3.1: undefined reference to `H5T_NATIVE_UINT64_g'
>>
>> Thanks,
>>
>> Alan
>>
>>
>>
>>
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