[Paraview] vtkXOpenGLRenderWindow (0x25abb70): bad X server connection. DISPLAY=ERROR

Burlen Loring bloring at lbl.gov
Thu Jul 17 11:26:53 EDT 2014


> Should DISPLAY be set?
yes if you have GPU hardware running on your cluster. In that case the 
xserver needs to be running. If it's not then you need to start it 
before launching PV.

if you don't have GPU's then you need to recompile ParaView for use with 
OSMesa. Here <http://www.paraview.org/Wiki/ParaView_And_Mesa_3D> are 
details.

On 07/17/2014 03:55 AM, Anton Shterenlikht wrote:
> The error is from a pvbatch 4.0.1.
> Please help.
>
> job submission script:
>
> newblue2> cat z.pv
> #!/bin/bash --login
> #
> #$Id: sample.bc3.pvbatch 1022 2013-12-25 15:32:33Z mexas $
> #
> #PBS -l walltime=00:10:00,nodes=1:ppn=16
> #PBS -j oe
> #PBS -m abe
>
> cd $HOME/nobkp/cgpack/branches/coarray/tests
> export OUTFILE=z.out
> echo > $OUTFILE
>
> module load apps/paraview-4.0.1
> echo "module list" >> $OUTFILE
> module list >> $OUTFILE 2>&1
>
> echo "LD_LIBRARY_PATH: " $LD_LIBRARY_PATH >> $OUTFILE
> echo "which mpirun: " `which mpirun` >> $OUTFILE
> export I_MPI_DAPL_PROVIDER=ofa-v2-ib0 >> $OUTFILE
>
> mpirun -n 16 pvbatch --use-offscreen-rendering z.xdmf.py
> #mpirun -n 16 pvbatch z.xdmf.py
> newblue2>
>
>
> The error:
>
> Warning: no access to tty (Bad file descriptor).
> Thus no job control in this shell.
> ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 531
> vtkXOpenGLRenderWindow (0x25abb70): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 531
> vtkXOpenGLRenderWindow (0xe5ed90): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 531
> vtkXOpenGLRenderWindow (0xe5edb0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 531
> vtkXOpenGLRenderWindow (0xe5eef0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 531
> vtkXOpenGLRenderWindow (0xe5eef0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 531
> vtkXOpenGLRenderWindow (0xe5eef0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 531
> vtkXOpenGLRenderWindow (0xe5eef0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 531
> vtkXOpenGLRenderWindow (0xe5eef0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 531
> vtkXOpenGLRenderWindow (0xe5eef0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 531
> vtkXOpenGLRenderWindow (0xe5eef0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 531
> vtkXOpenGLRenderWindow (0xe5eef0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 531
> vtkXOpenGLRenderWindow (0xe5eef0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 531
> vtkXOpenGLRenderWindow (0xe5eef0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 531
> vtkXOpenGLRenderWindow (0xe5eef0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 531
> vtkXOpenGLRenderWindow (0xe5eef0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 322
> vtkXOpenGLRenderWindow (0x25abb70): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 322
> vtkXOpenGLRenderWindow (0xe5edb0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 322
> vtkXOpenGLRenderWindow (0xe5eef0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 322
> vtkXOpenGLRenderWindow (0xe5eef0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 322
> vtkXOpenGLRenderWindow (0xe5eef0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 322
> vtkXOpenGLRenderWindow (0xe5eef0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 322
> vtkXOpenGLRenderWindow (0xe5eef0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 322
> vtkXOpenGLRenderWindow (0xe5eef0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 322
> vtkXOpenGLRenderWindow (0xe5eef0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 322
> vtkXOpenGLRenderWindow (0xe5eef0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 322
> vtkXOpenGLRenderWindow (0xe5eef0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 322
> vtkXOpenGLRenderWindow (0xe5eef0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 322
> vtkXOpenGLRenderWindow (0xe5eef0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 322
> vtkXOpenGLRenderWindow (0xe5eef0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 322
> vtkXOpenGLRenderWindow (0xe5ed90): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 531
> vtkXOpenGLRenderWindow (0xe5eef0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 322
> vtkXOpenGLRenderWindow (0xe5eef0): bad X server connection. DISPLAY=APPLICATION TERMINATED WITH THE EXIT STRING: Segmentation fault (signal 11)
>
>
> newblue2> echo $DISPLAY
> DISPLAY: Undefined variable.
> newblue2>
>
> Should DISPLAY be set?
>
> Below is z.xdmf.py, if needed.
>
> Thanks
>
> Anton
>
> ************************
>
> #$Id: sample.xdmf.py 1129 2014-07-16 12:24:06Z mexas $
>
> try: paraview.simple
> except: from paraview.simple import *
> paraview.simple._DisableFirstRenderCameraReset()
>
> z_xdmf = XDMFReader( FileName='z.xdmf' )
>
> AnimationScene1 = GetAnimationScene()
> AnimationScene1.EndTime = 10.0
> AnimationScene1.PlayMode = 'Snap To TimeSteps'
>
> z_xdmf.Sets = []
> z_xdmf.Grids = ['T0', 'T30', 'T60', 'T90', 'T120', 'T150', 'T180', 'T210', 'T240', 'T270', 'T300']
> z_xdmf.PointArrays = ['crack']
>
> RenderView1 = GetRenderView()
> RenderView1.CenterOfRotation = [99.5, 99.5, 199.5]
>
> DataRepresentation1 = Show()
> DataRepresentation1.EdgeColor = [0.0, 0.0, 0.5000076295109483]
> DataRepresentation1.Slice = 199
> DataRepresentation1.SelectionPointFieldDataArrayName = 'crack'
> DataRepresentation1.ScalarOpacityUnitDistance = 1.9457909325696094
> DataRepresentation1.Representation = 'Outline'
> DataRepresentation1.ScaleFactor = 39.900000000000006
>
> RenderView1.CameraPosition = [99.5, 99.5, 1142.7561204025358]
> RenderView1.CameraFocalPoint = [99.5, 99.5, 199.5]
> RenderView1.CameraClippingRange = [536.8185591985105, 1457.1524622085738]
> RenderView1.CameraParallelScale = 244.13264836969265
>
> Threshold1 = Threshold()
>
> Threshold1.Scalars = ['POINTS', 'crack']
> Threshold1.ThresholdRange = [-3.0, 2147483647.0]
>
> Threshold1.AllScalars = 0
> Threshold1.ThresholdRange = [-3.0, 0.0]
>
> DataRepresentation2 = Show()
> DataRepresentation2.EdgeColor = [0.0, 0.0, 0.5000076295109483]
> DataRepresentation2.SelectionPointFieldDataArrayName = 'crack'
> DataRepresentation2.ColorArrayName = ('POINT_DATA', 'crack')
> DataRepresentation2.ScalarOpacityUnitDistance = 1.7320508075688772
> DataRepresentation2.ScaleFactor = 0.2
>
> a1_crack_PVLookupTable = GetLookupTableForArray( "crack", 1, RGBPoints=[-3.0, 0.23, 0.299, 0.754, 1073741822.0, 0.865, 0.865, 0.865, 2147483647.0, 0.706, 0.016, 0.15], VectorMode='Magnitude', NanColor=[0.25, 0.0, 0.0], ColorSpace='Diverging', ScalarRangeInitialized=1.0 )
>
> a1_crack_PiecewiseFunction = CreatePiecewiseFunction( Points=[-3.0, 0.0, 0.5, 0.0, 2147483647.0, 1.0, 0.5, 0.0] )
>
> DataRepresentation2.ScalarOpacityFunction = a1_crack_PiecewiseFunction
> DataRepresentation2.LookupTable = a1_crack_PVLookupTable
>
> a1_crack_PVLookupTable.ScalarOpacityFunction = a1_crack_PiecewiseFunction
>
> RenderView1.CameraViewUp = [-0.23168815510934399, 0.295870302962722, -0.9267045713747051]
> RenderView1.CameraPosition = [168.38086733394152, 1000.5240094507878, 469.95012328596755]
> RenderView1.CameraClippingRange = [616.3953868850049, 1356.9816313770839]
> RenderView1.CameraFocalPoint = [99.49999999999996, 99.50000000000001, 199.49999999999994]
>
> WriteAnimation('z.ogv', Magnification=1, Quality=2, FrameRate=1.000000)
>
>
> Render()
>
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