[Paraview] vtkXOpenGLRenderWindow (0x25abb70): bad X server connection. DISPLAY=ERROR

Anton Shterenlikht mexas at bris.ac.uk
Thu Jul 17 06:55:09 EDT 2014


The error is from a pvbatch 4.0.1.
Please help.

job submission script:

newblue2> cat z.pv
#!/bin/bash --login
#
#$Id: sample.bc3.pvbatch 1022 2013-12-25 15:32:33Z mexas $
#
#PBS -l walltime=00:10:00,nodes=1:ppn=16
#PBS -j oe
#PBS -m abe

cd $HOME/nobkp/cgpack/branches/coarray/tests
export OUTFILE=z.out
echo > $OUTFILE

module load apps/paraview-4.0.1
echo "module list" >> $OUTFILE
module list >> $OUTFILE 2>&1

echo "LD_LIBRARY_PATH: " $LD_LIBRARY_PATH >> $OUTFILE
echo "which mpirun: " `which mpirun` >> $OUTFILE
export I_MPI_DAPL_PROVIDER=ofa-v2-ib0 >> $OUTFILE

mpirun -n 16 pvbatch --use-offscreen-rendering z.xdmf.py
#mpirun -n 16 pvbatch z.xdmf.py
newblue2> 


The error:

Warning: no access to tty (Bad file descriptor).
Thus no job control in this shell.
ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 531
vtkXOpenGLRenderWindow (0x25abb70): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 531
vtkXOpenGLRenderWindow (0xe5ed90): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 531
vtkXOpenGLRenderWindow (0xe5edb0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 531
vtkXOpenGLRenderWindow (0xe5eef0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 531
vtkXOpenGLRenderWindow (0xe5eef0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 531
vtkXOpenGLRenderWindow (0xe5eef0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 531
vtkXOpenGLRenderWindow (0xe5eef0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 531
vtkXOpenGLRenderWindow (0xe5eef0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 531
vtkXOpenGLRenderWindow (0xe5eef0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 531
vtkXOpenGLRenderWindow (0xe5eef0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 531
vtkXOpenGLRenderWindow (0xe5eef0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 531
vtkXOpenGLRenderWindow (0xe5eef0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 531
vtkXOpenGLRenderWindow (0xe5eef0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 531
vtkXOpenGLRenderWindow (0xe5eef0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 531
vtkXOpenGLRenderWindow (0xe5eef0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 322
vtkXOpenGLRenderWindow (0x25abb70): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 322
vtkXOpenGLRenderWindow (0xe5edb0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 322
vtkXOpenGLRenderWindow (0xe5eef0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 322
vtkXOpenGLRenderWindow (0xe5eef0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 322
vtkXOpenGLRenderWindow (0xe5eef0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 322
vtkXOpenGLRenderWindow (0xe5eef0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 322
vtkXOpenGLRenderWindow (0xe5eef0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 322
vtkXOpenGLRenderWindow (0xe5eef0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 322
vtkXOpenGLRenderWindow (0xe5eef0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 322
vtkXOpenGLRenderWindow (0xe5eef0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 322
vtkXOpenGLRenderWindow (0xe5eef0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 322
vtkXOpenGLRenderWindow (0xe5eef0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 322
vtkXOpenGLRenderWindow (0xe5eef0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 322
vtkXOpenGLRenderWindow (0xe5eef0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 322
vtkXOpenGLRenderWindow (0xe5ed90): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 531
vtkXOpenGLRenderWindow (0xe5eef0): bad X server connection. DISPLAY=ERROR: In /home/utkarsh/Dashboards/MyTests/NightlyMaster/ParaViewSuperbuild-Release/paraview/src/paraview/VTK/Rendering/OpenGL/vtkXOpenGLRenderWindow.cxx, line 322
vtkXOpenGLRenderWindow (0xe5eef0): bad X server connection. DISPLAY=APPLICATION TERMINATED WITH THE EXIT STRING: Segmentation fault (signal 11)


newblue2> echo $DISPLAY
DISPLAY: Undefined variable.
newblue2> 

Should DISPLAY be set?

Below is z.xdmf.py, if needed.

Thanks

Anton

************************

#$Id: sample.xdmf.py 1129 2014-07-16 12:24:06Z mexas $

try: paraview.simple
except: from paraview.simple import *
paraview.simple._DisableFirstRenderCameraReset()

z_xdmf = XDMFReader( FileName='z.xdmf' )

AnimationScene1 = GetAnimationScene()
AnimationScene1.EndTime = 10.0
AnimationScene1.PlayMode = 'Snap To TimeSteps'

z_xdmf.Sets = []
z_xdmf.Grids = ['T0', 'T30', 'T60', 'T90', 'T120', 'T150', 'T180', 'T210', 'T240', 'T270', 'T300']
z_xdmf.PointArrays = ['crack']

RenderView1 = GetRenderView()
RenderView1.CenterOfRotation = [99.5, 99.5, 199.5]

DataRepresentation1 = Show()
DataRepresentation1.EdgeColor = [0.0, 0.0, 0.5000076295109483]
DataRepresentation1.Slice = 199
DataRepresentation1.SelectionPointFieldDataArrayName = 'crack'
DataRepresentation1.ScalarOpacityUnitDistance = 1.9457909325696094
DataRepresentation1.Representation = 'Outline'
DataRepresentation1.ScaleFactor = 39.900000000000006

RenderView1.CameraPosition = [99.5, 99.5, 1142.7561204025358]
RenderView1.CameraFocalPoint = [99.5, 99.5, 199.5]
RenderView1.CameraClippingRange = [536.8185591985105, 1457.1524622085738]
RenderView1.CameraParallelScale = 244.13264836969265

Threshold1 = Threshold()

Threshold1.Scalars = ['POINTS', 'crack']
Threshold1.ThresholdRange = [-3.0, 2147483647.0]

Threshold1.AllScalars = 0
Threshold1.ThresholdRange = [-3.0, 0.0]

DataRepresentation2 = Show()
DataRepresentation2.EdgeColor = [0.0, 0.0, 0.5000076295109483]
DataRepresentation2.SelectionPointFieldDataArrayName = 'crack'
DataRepresentation2.ColorArrayName = ('POINT_DATA', 'crack')
DataRepresentation2.ScalarOpacityUnitDistance = 1.7320508075688772
DataRepresentation2.ScaleFactor = 0.2

a1_crack_PVLookupTable = GetLookupTableForArray( "crack", 1, RGBPoints=[-3.0, 0.23, 0.299, 0.754, 1073741822.0, 0.865, 0.865, 0.865, 2147483647.0, 0.706, 0.016, 0.15], VectorMode='Magnitude', NanColor=[0.25, 0.0, 0.0], ColorSpace='Diverging', ScalarRangeInitialized=1.0 )

a1_crack_PiecewiseFunction = CreatePiecewiseFunction( Points=[-3.0, 0.0, 0.5, 0.0, 2147483647.0, 1.0, 0.5, 0.0] )

DataRepresentation2.ScalarOpacityFunction = a1_crack_PiecewiseFunction
DataRepresentation2.LookupTable = a1_crack_PVLookupTable

a1_crack_PVLookupTable.ScalarOpacityFunction = a1_crack_PiecewiseFunction

RenderView1.CameraViewUp = [-0.23168815510934399, 0.295870302962722, -0.9267045713747051]
RenderView1.CameraPosition = [168.38086733394152, 1000.5240094507878, 469.95012328596755]
RenderView1.CameraClippingRange = [616.3953868850049, 1356.9816313770839]
RenderView1.CameraFocalPoint = [99.49999999999996, 99.50000000000001, 199.49999999999994]

WriteAnimation('z.ogv', Magnification=1, Quality=2, FrameRate=1.000000)


Render()



More information about the ParaView mailing list