[ITK-dev] HDF5 TransformIO broken with System HDF5

[Rashad M]

FYI,

Here is a submission with system HDF5 but with Fedora 20. I think package
is similar in RHEL

http://open.cdash.org/buildSummary.php?buildid=3316792


On Wed, May 7, 2014 at 1:31 PM, Matt McCormick
<matt.mccormick at kitware.com>wrote:

> Hi Brad,
>
> On Ubuntu 12.04, there appears to be a number of HDF5 "-dev" packages:
>
> libhdf5-lam-dev
> libhdf5-mpi-dev
> libhdf5-mpich-dev
> libhdf5-openmpi-dev
> libhdf5-serial-dev
>
> Which one are you using?
>
> Thanks,
> Matt
>
> On Wed, May 7, 2014 at 1:23 PM, Matt McCormick
> <matt.mccormick at kitware.com> wrote:
> > Hi Brad,
> >
> > It looks like our code coverage for the HDF TransformIO is pretty good
> > [1], but I do not see a dashboard submission for those platforms that
> > use a system HDF5.  I will set one up on faraway.kitware and try to
> > reproduce the SimpleITK test failure.
> >
> > Thanks,
> > Matt
> >
> > [1]
> http://lorensen.github.io/VTKCodeCoverage/ITK/IO/TransformHDF5/src/index.html
> >
> > On Wed, May 7, 2014 at 8:59 AM, Bradley Lowekamp <blowekamp at mail.nih.gov>
> wrote:
> >> Hello,
> >>
> >> I wrote some SimpleITK tests to write out HDF5 transforms. They are
> failing when using ITK built with system HDF5. Specifically with RHEL5 and
> Ubuntu 12.04. I believe this is a critical issue as it's how ITK is being
> built for Linux distributions.
> >>
> >> Looking through my ITK nightly build testing directory I didn't see any
> hdf5 files which leads me to believe this IO transform format may not be
> well tested.
> >>
> >> I would greatly appreciate some assistance on this issue.
> >>
> >> Here is my related SimpleITK issue.
> >> https://issues.itk.org/jira/browse/SIMPLEITK-535
> >>
> >> Thanks,
> >> Brad
> >>
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-- 
Regards,
   Rashad
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