MicroControl:Usage

Procedure to define volumes of interest

User can click on the virtual slide to create a point of interest

While operating the GUI client beside microscope, users can

Regions of importance

Each position of interest

1. x-y Stage position
2. Focus
3. Track settings mainly excitations and detector gains
4. Separate configuration for stacks
5. Separate configuration for tiles

Limitations

Currently all tests have been performed on LSM 510 series microscopes. I do have license for LSM 710 (zen) but it will require some more testing before deployment.

Zeiss API does not support exporting in latest LSM 5.X format. However it does support LSM 4.x format. It is also possible currently to map the desired channels to a single or multiple TIFF files.