ITK/Release 4.1 Changed From Previous
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Andriy Kot (1):
ENH: itkMaskFeaturePointSelectionFilter: initial submission
Arnaud Gelas (9):
DOC: fix doxygen warning DOC: Add formula for the curvature term DOC: update doxygen configuration file for Doxygen 1.6.1 ENH: Possibility to provide a propagation image PERF: Minor speed improvement in LabelObject / LabelMap DOC: fix doxygen warnings ENH: Make use of types defined in Histogram to be able to handle 64 bit images ENH: Use types from itk::Histogram BUG: Lots of classes were undocumented cause of a __itkMacro_h was undefined
Baohua Wu (1):
ENH: added convergence checking in itkGradientDescentOptimizerv4
Bill Lorensen (6):
COMP: Unterminated string causes valgrind defect. BUG: Wrong size for parameters. BUG: Older versions of VTK do not define VTK_LIBRARIES BUG: Older version of VTK cannot be used with ITK BUG: zlib 1.2.6 API change BUG: CPack was not set up propery for ITKv4
Brad King (9):
ENH: Teach ExternalData to expand DATA{} inside strings ENH: ExternalData: Add "-stamp" suffix to build outputs ENH: ExternalData: Add option ExternalData_BINARY_ROOT ENH: Teach git-gerrit-(push|merge) to validate topic name ENH: Teach git-gerrit-merge to report topic name ENH: Simplify local Git hook chaining BUG: Fix ITK prepare-commit-msg hook to not erase branch name BUG: Fix ITK prepare-commit-msg hook for non-GNU sed MetaIO: Always use std:: streams for VTK
Bradley Lowekamp (26):
COMP: Fixing compilation warning in the thresholding calculators DOC: Updated documentation for ThresholdMaximumConnectedComponents ENH: Adding support for VectorImages to LabelToRGBImageFilter ENH: VectorConnectedComponet filter to work with VectorImages BUG: Fixing UpperBoundary parameter in ThresholdMaxCC filter BUG: Fix mismatch in internal image types for IsolatedWatershed BUG: Some Set by scalar methods were not modifing the time of filter ENH: adding support to LabelOverlay for VectorImage output ENH: Adding Image::Rebind to support smoothing vector images ENH: Adding Image::Rebind to support smoothing vector images BUG: VotingBinary could not set output pixels before COMP: fix comparison between signed and unsigned with cast BUG: Restoring adaptor support to SmoothingRecursiveGaussian BUG: corrected libtiff to be confgured for big-endian system BUG: Adding tolerance to the VectorThreshold level-set test COMP: Address warnings in PreWarpTest BUG: Adding tolerance to ThresholdSegmentationLevelSetWhiteMatterTest COMP: attributes don't do anything in forward declarations COMP: fix warning of signed unsigned comparison BUG: Adjust intensity tolerance for SimpleImageRegistrationTest COMP: Use SizeValueType for indexing in Neighborhoods ENH: adding additional dart metric for image error statistics BUG: Corretly choose best baseline for difference image COMP: Fix warning in BalloonForceFilte about vd being unintialized BUG: prevent divide by zero in computing mean BUG: Set the number of components-per-pixel for SeriesReader
Brian Avants (5):
ENH: adding a multi-start optimizer ENH: multi-optimizers w/registration tests ENH: fix jacobian wrt params + img-grad reorientation ENH: updates for algorithm correctness. BUG: cleaning up the tv field registration
Cory Quammen (5):
STYLE: Fixed typo in test variable name COMP: Added undefined type ENH: Added Deconvolution module ENH: Added linear deconvolution filters DOC: Fixed indices in pad image filter diagrams
David Doria (1):
DOC: Add Doxygen comments to some functions.
Félix C. Morency (1):
ENH: Added itkVTKImageToImageFilter and Python wrapper to VtkGlue
Gang Song (3):
BUG: return false if dividing by zero in ANTS CC ENH: Clean up the Normalized Cross Correlation in Metricv4 ENH: add test for validating image gradients in metricv4
Gaëtan Lehmann (9):
ENH: Add required named inputs managements in ProcessObject BUG: fix module name in module2module.py ENH: add wrapping backward compatibility macros STYLE: fix InitializationBiasedParticleSwarmOptimizer doxygen name BUG: fix WRAP_ITK_INSTALL_PREFIX content BUG: remove SwigPyIterator/PySwigIterator COMP: global Clone() architecture compatible with java BUG: *InDoxygenGroup tests should be ignored by valgrind COMP: fix missing vtkImagingPythonD lib link
Hans Johnson (13):
PERF: Updated lbfgsb to fix bug COMP: Be compliant with ANSI standard COMP: Removed clang compiler warnings. BUG: Remove uninitialized memory print. BUG: Virtual was missing on derived class COMP: Removed HDF5 unused types. COMP: Improve coverage of Kernel BUG: 32bit windows bug introduced DOC: Fixed documentation to match code behavior DOC: Fixed minor documentation issues BUG: Added test to expose overlooked bug BUG: Propogated bug from ITKv3 Optimized BSplines COMP: Mismatch array length traversal
ITK Migration V4 (3):
DOC: Modify BinaryMorphologicalOpeningImageFilter comments. DOC: Modify ScalarImageToTextureFeaturesFilter comments. DOC: Modify IntensityWindowingImageFilter comments.
Kent Williams (3):
COMP: cleanup based on CLang warnings COMP: Disable GNU extensions for CLang++ ENH: Add Clone Method to transform hierarchy.
Luis Ibanez (1):
ENH: Scripts to generate Git Statistics.
Marius Staring (1):
PERF: Switched order of if-statement and for-loop in DetermineRegionOfSupport
Matthew McCormick (16):
ENH: Bump CMakeLists.txt version to 4.1.0. DOC: Fix log_{10} e doxygen LaTeX formula. PERF: Thread Whitaker level set ComputeIteration. BUG: LevelSetDenseImage test recognize zero values. COMP: Fixing missing include in itkMaskFeaturePointSelectionFilter. BUG: Only add MRC to registration factories with ITK_USE_REVIEW ON. BUG: Check pthread_create return value. PERF: Thread LevelSetEvolution::ComputeIteration for multiple domains. ENH: Use compensated summation in MutualInformationImageToImageMetric. STYLE: Fix KWStyle errors. BUG: Fix VideoFileReader memory leak. DOC: Fix typo in DifferenceImageFilter migration guide. COMP: Fix HDF5 build with Windows NMake JOM generator. BUG: Remove CTEST_MEMORYCHECK_SUPPRESSIONS_FILE from CTestCustom.cmake.in BUG: Add TimeVaryingBSplineVelocityFieldTransform to wrapping exclusion. COMP: Warn about VisualStudio parallel build issues.
Michael Stauffer (21):
ENH: Add itkCompensatedSummationTest2 BUG: Fix the mapping of sampled points in ImageToImageMetricv4. BUG: Fix itkCompensatedSummationTest2 ENH: Add MattesMutualImageToImageMetricv4 ENH: Add options for scales & learning rate estimation behavior BUG: Fix sampled point list creation in ImageToImageMetricv4 BUG: Metricsv4: set default metric value to max PERF: itkTimeVaryingBSplineVelocityFieldImageRegistrationTest duration COMP: Fix warnings BUG: Remove zero-point assert in JointHistorgram metricv4 BUG: Address valgrind errors in V4 registration framework. BUG: ANTSNeigh metric - check valid point & test non-overlapping BUG: MattesMutual v4 metric bug in number of points PERF: TimeVaryingVelocityField - Shorten test time BUG: Add debug info to SimpleImageRegistrationTest BUG: SimpleImageRegistrationTest - remove versions 2 & 3 BUG: itkSimpleImageRegistrationTest - more debug changes BUG: itkSimpleImageRegistrationTest - still more debug changes BUG: ImageToImageMetricv4 - concept check for integer image BUG: Rename and fix v4 Demons metric to MeansSquares BUG: yet still more debugging for itkSimpleImageRegistrationTest
Nick Tustison (5):
ENH: Adding time-varying B-spline transform. ENH: Adding SyN registration method. BUG: Assignment ordering was not correct. ENH: Adding gaussian interpolators. BUG: array subscript is out of bounds.
Richard Beare (2):
ENH: Masking option for histogram thresholding BUG: Errors from dashboard
Sean McBride (1):
BUG: disabled use of undefined signed overflow in nrrd test
Xiaoxiao Liu (2):
ENH: Add a video filtering module. BUG: Fix OpenCVVideoIOTest windows compiling errors.