[IGSTK-Users] MicronTracker_initialization_file

Boettcher, Dr. Peter Boettcher at kleintierklinik.uni-leipzig.de
Wed Jul 2 15:24:15 EDT 2008


I run the skript with all necessary files. But unfortunately no connection is been established to the MicronTracker. The tracker works fine as I can get data from the demo Claron ships with the software. 
 
Same accounts for the MicronTrackerTollTest. The skript runs fine, but I get no matrix data.
 
I am using the bayonetPointer Tool from Claron.
 
Peter
 
This is what the logger file looks like:
24503973094.949295  :    (DEBUG) igstk::Tracker::RequestOpen called...
24503973094.949429  :    (DEBUG) State transition is being made : MicronTracker  PointerID 05A4C710 IdleState(1)  with EstablishCommunicationInput(11) ---> AttemptingToEstablishCommunicationState(2).
24503973094.949509  :    (DEBUG) igstk::Tracker::AttemptToOpenProcessing called ...
24503973094.949562  :    (DEBUG) igstk::MicronTracker::InternalOpen called ...
24503973094.949612  :    (DEBUG) igstk::MicronTracker::LoadMarkerTemplate called..
24503973094.965019  :    (DEBUG) igstk::MicronTracker::Initialize called ...
24503973094.965473  :    (DEBUG) State transition is being made : MicronTracker  PointerID 05A4C710 AttemptingToEstablishCommunicationState(2)  with SuccessInput(19) ---> CommunicationEstablishedState(4).
24503973094.965546  :    (DEBUG) igstk::Tracker::CommunicationEstablishmentSuccessProcessing called ...
24503973094.975937  :    (DEBUG) igstk::MicronTrackerTool::RequestSetMarkerName called ...
24503973094.976044  :    (DEBUG) State transition is being made : MicronTrackerTool  PointerID 05A5A288 IdleState(101)  with ValidMarkerNameInput(103) ---> MarkerNameSpecifiedState(102).
24503973094.976112  :    (DEBUG) igstk::MicronTrackerTool::SetMarkerNameProcessing called ...
24503973094.976166  :    (DEBUG) igstk::TrackerTool::SetTrackerToolIdentifier called...
24503973094.976219  :    (DEBUG) igstk::TrackerTool::RequestConfigure called...
24503973094.976334  :    (DEBUG) State transition is being made : MicronTrackerTool  PointerID 05A5A288 IdleState(62)  with ConfigureToolInput(49) ---> AttemptingToConfigureTrackerToolState(63).
24503973094.97641  :    (DEBUG) igstk::TrackerTool::AttemptToConfigureProcessing called ...
24503973094.976471  :    (DEBUG) igstk::PolarisTrackerTool::CheckIfTrackerToolIsConfigured called...
24503973094.976582  :    (DEBUG) State transition is being made : MicronTrackerTool  PointerID 05A5A288 AttemptingToConfigureTrackerToolState(63)  with ToolConfigurationSuccessInput(50) ---> ConfiguredState(64).
24503973094.976654  :    (DEBUG) igstk::TrackerTool::TrackerToolConfigurationSuccessProcessing called ...
24503973094.976715  :    (DEBUG) igstk::TrackerTool::RequestAttachToTracker called...
24503973094.976814  :    (DEBUG) State transition is being made : MicronTrackerTool  PointerID 05A5A288 ConfiguredState(64)  with AttachToolToTrackerInput(52) ---> AttemptingToAttachTrackerToolToTrackerState(65).
24503973094.976883  :    (DEBUG) igstk::TrackerTool::AttemptToAttachTrackerToolToTracker called ...
24503973094.97694  :    (DEBUG) igstk::Tracker::RequestAttachTool called ...
24503973094.977043  :    (DEBUG) State transition is being made : MicronTracker  PointerID 05A4C710 CommunicationEstablishedState(4)  with AttachTrackerToolInput(13) ---> AttemptingToAttachTrackerToolState(5).
24503973094.977112  :    (DEBUG) igstk::Tracker::AttemptToAttachTrackerToolProcessing called ...
24503973094.977165  :    (DEBUG) igstk::MicronTracker::VerifyTrackerToolInformation called ...
24503973094.977234  :    (CRITICAL) Tracker tool template NOT FOUND24503973094.977364  :    (DEBUG) State transition is being made : MicronTracker  PointerID 05A4C710 AttemptingToAttachTrackerToolState(5)  with FailureInput(20) ---> CommunicationEstablishedState(4).
24503973094.977444  :    (DEBUG) igstk::Tracker::AttachingTrackerToolFailureProcessing called ...
24503973094.977505  :    (DEBUG) igstk::TrackerTool::ReportFailedTrackerToolAttachment called ...
24503973094.977619  :    (DEBUG) State transition is being made : MicronTrackerTool  PointerID 05A5A288 AttemptingToAttachTrackerToolToTrackerState(65)  with AttachmentToTrackerFailureInput(59) ---> ConfiguredState(64).
24503973094.977695  :    (DEBUG) igstk::TrackerTool::TrackerToolConfigurationFailureProcessing called ...
24503973094.986126  :    (DEBUG) igstk::MicronTrackerTool::RequestSetMarkerName called ...
24503973094.986248  :    (DEBUG) State transition is being made : MicronTrackerTool  PointerID 05A618B0 IdleState(157)  with ValidMarkerNameInput(159) ---> MarkerNameSpecifiedState(158).
24503973094.986324  :    (DEBUG) igstk::MicronTrackerTool::SetMarkerNameProcessing called ...
24503973094.986549  :    (DEBUG) igstk::TrackerTool::SetTrackerToolIdentifier called...
24503973094.98661  :    (DEBUG) igstk::TrackerTool::RequestConfigure called...
24503973094.986721  :    (DEBUG) State transition is being made : MicronTrackerTool  PointerID 05A618B0 IdleState(118)  with ConfigureToolInput(105) ---> AttemptingToConfigureTrackerToolState(119).
24503973094.98679  :    (DEBUG) igstk::TrackerTool::AttemptToConfigureProcessing called ...
24503973094.986843  :    (DEBUG) igstk::PolarisTrackerTool::CheckIfTrackerToolIsConfigured called...
24503973094.986946  :    (DEBUG) State transition is being made : MicronTrackerTool  PointerID 05A618B0 AttemptingToConfigureTrackerToolState(119)  with ToolConfigurationSuccessInput(106) ---> ConfiguredState(120).
24503973094.987019  :    (DEBUG) igstk::TrackerTool::TrackerToolConfigurationSuccessProcessing called ...
24503973094.987083  :    (DEBUG) igstk::TrackerTool::RequestAttachToTracker called...
24503973094.987186  :    (DEBUG) State transition is being made : MicronTrackerTool  PointerID 05A618B0 ConfiguredState(120)  with AttachToolToTrackerInput(108) ---> AttemptingToAttachTrackerToolToTrackerState(121).
24503973094.987255  :    (DEBUG) igstk::TrackerTool::AttemptToAttachTrackerToolToTracker called ...
24503973094.987309  :    (DEBUG) igstk::Tracker::RequestAttachTool called ...
24503973094.987411  :    (DEBUG) State transition is being made : MicronTracker  PointerID 05A4C710 CommunicationEstablishedState(4)  with AttachTrackerToolInput(13) ---> AttemptingToAttachTrackerToolState(5).
24503973094.98748  :    (DEBUG) igstk::Tracker::AttemptToAttachTrackerToolProcessing called ...
24503973094.987534  :    (DEBUG) igstk::MicronTracker::VerifyTrackerToolInformation called ...
24503973094.987595  :    (CRITICAL) Tracker tool template NOT FOUND24503973094.987694  :    (DEBUG) State transition is being made : MicronTracker  PointerID 05A4C710 AttemptingToAttachTrackerToolState(5)  with FailureInput(20) ---> CommunicationEstablishedState(4).
24503973094.987762  :    (DEBUG) igstk::Tracker::AttachingTrackerToolFailureProcessing called ...
24503973094.987816  :    (DEBUG) igstk::TrackerTool::ReportFailedTrackerToolAttachment called ...
24503973094.987919  :    (DEBUG) State transition is being made : MicronTrackerTool  PointerID 05A618B0 AttemptingToAttachTrackerToolToTrackerState(121)  with AttachmentToTrackerFailureInput(115) ---> ConfiguredState(120).
24503973094.987991  :    (DEBUG) igstk::TrackerTool::TrackerToolConfigurationFailureProcessing called ...
24503973094.988083  :    (DEBUG) igstk::Tracker::RequestStartTracking called ...
24503973094.988194  :    (DEBUG) State transition is being made : MicronTracker  PointerID 05A4C710 CommunicationEstablishedState(4)  with StartTrackingInput(12) ---> AttemptingToTrackState(7).
24503973094.98827  :    (DEBUG) igstk::Tracker::AttemptToStartTrackingProcessing  called ...
24503973094.988323  :    (DEBUG) igstk::MicronTracker::InternalStartTracking called ...
24503973094.988377  :    (DEBUG) igstk::MicronTracker::SetUpCameras called ...
24503973095.298634  :    (CRITICAL)  No camera available or missing calibration file in:  BumbleBee_6021046.calib24503973095.298729  :    (CRITICAL) MTC Error returned: Cannot open calibration file BumbleBee_6021046.calib/BumbleBee_6021046.calib24503973095.298798  :    (CRITICAL) Error setting up cameras 24503973095.298927  :    (DEBUG) State transition is being made : MicronTracker  PointerID 05A4C710 AttemptingToTrackState(7)  with FailureInput(20) ---> CommunicationEstablishedState(4).
24503973095.299  :    (DEBUG) igstk::Tracker::StartTrackingFailureProcessing called ...
24503973095.815952  :    (DEBUG) igstk::Tracker::RequestStopTracking called ...
24503973095.816097  :    (DEBUG) State transition is being made : MicronTracker  PointerID 05A4C710 CommunicationEstablishedState(4)  with StopTrackingInput(15) ---> CommunicationEstablishedState(4).
24503973095.816174  :    (DEBUG) igstk::Tracker::ReportInvalidRequestProcessing called...
24503973095.819832  :    (DEBUG) igstk::TrackerTool::RequestDetachFromTracker called...
24503973095.819942  :    (CRITICAL) In class MicronTrackerTool No transitions have been defined for current state and input  State = 64 [ConfiguredState] Input = 57 [DetachTrackerToolFromTrackerInput]
24503973095.820019  :    (DEBUG) igstk::Tracker::RequestStartTracking called ...
24503973095.820141  :    (DEBUG) State transition is being made : MicronTracker  PointerID 05A4C710 CommunicationEstablishedState(4)  with StartTrackingInput(12) ---> AttemptingToTrackState(7).
24503973095.820213  :    (DEBUG) igstk::Tracker::AttemptToStartTrackingProcessing  called ...
24503973095.820274  :    (DEBUG) igstk::MicronTracker::InternalStartTracking called ...
24503973095.820328  :    (DEBUG) igstk::MicronTracker::SetUpCameras called ...
24503973096.096931  :    (CRITICAL)  No camera available or missing calibration file in:  BumbleBee_6021046.calib24503973096.097023  :    (CRITICAL) MTC Error returned: Cannot open calibration file BumbleBee_6021046.calib/BumbleBee_6021046.calib24503973096.097088  :    (CRITICAL) Error setting up cameras 24503973096.097218  :    (DEBUG) State transition is being made : MicronTracker  PointerID 05A4C710 AttemptingToTrackState(7)  with FailureInput(20) ---> CommunicationEstablishedState(4).
24503973096.097298  :    (DEBUG) igstk::Tracker::StartTrackingFailureProcessing called ...
24503973096.359978  :    (DEBUG) igstk::Tracker::RequestStopTracking called ...
24503973096.360126  :    (DEBUG) State transition is being made : MicronTracker  PointerID 05A4C710 CommunicationEstablishedState(4)  with StopTrackingInput(15) ---> CommunicationEstablishedState(4).
24503973096.360203  :    (DEBUG) igstk::Tracker::ReportInvalidRequestProcessing called...
24503973096.362606  :    (DEBUG) igstk::Tracker::RequestClose called ...
24503973096.362728  :    (DEBUG) State transition is being made : MicronTracker  PointerID 05A4C710 CommunicationEstablishedState(4)  with CloseCommunicationInput(17) ---> AttemptingToCloseCommunicationState(3).
24503973096.362816  :    (DEBUG) igstk::Tracker::CloseFromCommunicatingStateProcessing called ...
24503973096.362885  :    (DEBUG) igstk::MicronTracker::InternalClose called ...
24503973096.362995  :    (DEBUG) State transition is being made : MicronTracker  PointerID 05A4C710 AttemptingToCloseCommunicationState(3)  with SuccessInput(19) ---> IdleState(1).
24503973096.363068  :    (DEBUG) igstk::Tracker::CloseCommunicationSuccessProcessing called ...

 
------------------------------------
Peter Böttcher, Dr med vet, DipECVS
European Veterinary Specialist in Surgery
Fachtierarzt für Kleintierchirurgie
Klinik für Kleintiere 
Universität Leipzig 
An den Tierkliniken 23 
D-04103 Leipzig (Germany)
Tel: +49-341-9738700 
Fax: +49-341-9738799
email: boettcher at kleintierklinik.uni-leipzig.de


________________________________

Von: Andinet Enquobahrie [mailto:andinet.enqu at kitware.com]
Gesendet: Mi 02.07.2008 20:20
An: Chris Heath
Cc: Boettcher, Dr. Peter; igstk-users at public.kitware.com
Betreff: Re: [IGSTK-Users] MicronTracker_initialization_file




> The MicronTracker requires a text file that is used to initialize the
> settings for the camera.  Luckily, igstkMicronTracker generates the
> particulars for the file, so just create an empty text file with
> extension .ini and specify it as the initialization file.
Actually, igstkMicronTracker does not generate the information that
needs to be
specified in the file. During initialization phase, the tracker code
uses the one that is specified
by the user. The initialization file contains various camera and
algorithm parameters.

There is a sample initialization file in the Sandbox that you can use..

Sandbox/Testing/Data/Input/MicronTracker.ini

Let us know if you encounter any other problems...

-Andinet

>
> Chris
>
> On Jul 2, 2008, at 12:52 PM, Boettcher, Dr. Peter wrote:
>
>> I try to setup igsth with MicronTracker. I build both igstk and
>> igstkSandbox with MicronTracker ON - with success (after upgrading to
>> 2.6 MTC)
>> 
>> Now i try to get some data from the tracker using MicronTrackerTest.
>> But I do not know what the MicronTracker_initialization_file is.
>> 
>> Regards, Peter
>> 
>> 
>> _______________________________________________
>> IGSTK-Users mailing list
>> IGSTK-Users at public.kitware.com <mailto:IGSTK-Users at public.kitware.com>
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>
> ------------------------------------------------------------------------
>
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--
==========================================================
Andinet A. Enquobahrie, PhD
R&D Engineer
Kitware Inc.

28 Corporate Drive
Clifton Park, NY 12065-8662
Phone: 518-371-3971 x124
www.kitware.com




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