[vtkusers] Creating 3d model from 2d image slices

[Andras Lasso]

If it is not a requirement to develop new software from scratch, but you just need to build high-quality models from images, then you’d better use a software that is already designed to do this.

You can find here step-by-step instructions for creating 3D models using 3D Slicer: https://www.slicer.org/wiki/Documentation/Nightly/Training#Slicer4_Image_Segmentation. The application and its segment editor module is based on VTK, free, open-source, and fully customizable using Python scripting. Download & more information: www.slicer.org<http://www.slicer.org>.

For simpler segmentations, you can also try ITK-Snap or MITK.

Andras


From: vtkusers [mailto:vtkusers-bounces at vtk.org] On Behalf Of Cory Quammen
Sent: Tuesday, February 13, 2018 8:59 AM
To: Ashef Shahrior <ashahrior.91994 at gmail.com>
Cc: vtkusers <vtkusers at vtk.org>
Subject: Re: [vtkusers] Creating 3d model from 2d image slices

Ashef,

Welcome to VTK. Fortunately for you, there are plenty of resources online to learn how to do this.

Website - www.vtk.org<https://na01.safelinks.protection.outlook.com/?url=http%3A%2F%2Fwww.vtk.org&data=02%7C01%7Classo%40queensu.ca%7Cb56f378e1108441d866b08d572e9e25d%7Cd61ecb3b38b142d582c4efb2838b925c%7C1%7C0%7C636541271209156819&sdata=AvUaX1R7JWiSTlPMj9eMy7GT5C5zAngS6Nphjijz6xQ%3D&reserved=0>

Books -
  VTK User's Guide - https://www.vtk.org/vtk-users-guide/<https://na01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fwww.vtk.org%2Fvtk-users-guide%2F&data=02%7C01%7Classo%40queensu.ca%7Cb56f378e1108441d866b08d572e9e25d%7Cd61ecb3b38b142d582c4efb2838b925c%7C1%7C0%7C636541271209156819&sdata=4Ssw1RqqiwS%2B0Rf%2F574o14ZySSW%2Bcx79YlWALZn%2BpxQ%3D&reserved=0>
  VTK Textbook - https://www.vtk.org/vtk-textbook/<https://na01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fwww.vtk.org%2Fvtk-textbook%2F&data=02%7C01%7Classo%40queensu.ca%7Cb56f378e1108441d866b08d572e9e25d%7Cd61ecb3b38b142d582c4efb2838b925c%7C1%7C0%7C636541271209156819&sdata=XdZ%2FXV6gIvVG6%2BFyKj5iymoazeg%2FnQ7lQxeknZxz8as%3D&reserved=0>

Examples - https://lorensen.github.io/VTKExamples/site/Cxx/<https://na01.safelinks.protection.outlook.com/?url=https%3A%2F%2Florensen.github.io%2FVTKExamples%2Fsite%2FCxx%2F&data=02%7C01%7Classo%40queensu.ca%7Cb56f378e1108441d866b08d572e9e25d%7Cd61ecb3b38b142d582c4efb2838b925c%7C1%7C0%7C636541271209156819&sdata=d3sq11brCXp%2FZbow%2F7SUBgFFCUvuAoRP7psix8VGJFI%3D&reserved=0>

Good luck on your project!

Cory

On Tue, Feb 13, 2018 at 6:38 AM, Ashef Shahrior <ashahrior.91994 at gmail.com<mailto:ashahrior.91994 at gmail.com>> wrote:
I am a complete newbie to VTK & ITK. I'm trying to create a 3d model of the human brain/bone from 2d image slices using VTK, Visual Studio, C++, CMake; or at least I think that's what I'm supposed to do as per my project supervisor. Now, I'd like to know what things I am required to learn or what procedures should I follow to accomplish my task, what components should I search for to get it done. I don't seem to find any tutorial on youtube on this but some videos on the built model projects. I have done some searching on the internet but I guess I am not doing it the right way to get the information I require. Can anyone please assist me with some information in this matter? It'll be a great help. Otherwise, I'll be getting a straight F. Thanks in advance. :)

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--
Cory Quammen
Staff R&D Engineer
Kitware, Inc.
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