Hi Seb,
As far as I can see I have the path to JDK6 set properly. I had to do a
couple things special for linux64 which I didn't need for linux32. One of
those things is to set the flags to -fPic, or it wouldn't compile properly.
There must be an easier way to get the values of cmake, but I went in page
by page until I got the whole thing. This is the only way I can show you
what I am doing and perhaps you can see something "which any fool can see",
but I can't see. (I don't see a method to attach a file, so I'll paste it
in.)
Thanks for all your help. I hope eventually it will work, and I'll find out
what I did wrong.
Ilan
Page 1 of 15
BUILD_DOCUMENTATION OFF
BUILD_EXAMPLES OFF
BUILD_SHARED_LIBS OFF
BUILD_TESTING OFF
BZRCOMMAND BZRCOMMAND-NOTFOUND
CMAKE_AR /usr/bin/ar
CMAKE_BACKWARDS_COMPATIBILITY 2.4
CMAKE_BUILD_TYPE Release
CMAKE_COLOR_MAKEFILE ON
CMAKE_CXX_COMPILER /usr/bin/c++
CMAKE_CXX_FLAGS -fPIC
CMAKE_CXX_FLAGS_DEBUG -g
CMAKE_CXX_FLAGS_MINSIZEREL -Os -DNDEBUG
CMAKE_CXX_FLAGS_RELEASE -O3 -DNDEBUG
CMAKE_CXX_FLAGS_RELWITHDEBINFO -O2 -g
CMAKE_C_COMPILER /usr/bin/gcc
CMAKE_C_FLAGS -fPIC
Page 2 of 15
CMAKE_C_FLAGS_DEBUG -g
CMAKE_C_FLAGS_MINSIZEREL -Os -DNDEBUG
CMAKE_C_FLAGS_RELEASE -O3 -DNDEBUG
CMAKE_C_FLAGS_RELWITHDEBINFO -O2 -g
CMAKE_EXE_LINKER_FLAGS
CMAKE_EXE_LINKER_FLAGS_DEBUG
CMAKE_EXE_LINKER_FLAGS_MINSIZE
CMAKE_EXE_LINKER_FLAGS_RELEASE
CMAKE_EXE_LINKER_FLAGS_RELWITH
CMAKE_EXPORT_COMPILE_COMMANDS OFF
CMAKE_HP_PTHREADS OFF
CMAKE_INSTALL_PREFIX /usr/local
CMAKE_LINKER /usr/bin/ld
CMAKE_MAKE_PROGRAM /usr/bin/make
CMAKE_MODULE_LINKER_FLAGS
CMAKE_MODULE_LINKER_FLAGS_DEBU
CMAKE_MODULE_LINKER_FLAGS_MINS
Page 3 of 15
CMAKE_MODULE_LINKER_FLAGS_RELE
CMAKE_MODULE_LINKER_FLAGS_RELW
CMAKE_NM /usr/bin/nm
CMAKE_OBJCOPY /usr/bin/objcopy
CMAKE_OBJDUMP /usr/bin/objdump
CMAKE_RANLIB /usr/bin/ranlib
CMAKE_SHARED_LINKER_FLAGS
CMAKE_SHARED_LINKER_FLAGS_DEBU
CMAKE_SHARED_LINKER_FLAGS_MINS
CMAKE_SHARED_LINKER_FLAGS_RELE
CMAKE_SHARED_LINKER_FLAGS_RELW
CMAKE_SKIP_INSTALL_RPATH OFF
CMAKE_SKIP_RPATH OFF
CMAKE_STRIP /usr/bin/strip
CMAKE_THREAD_LIBS -lpthread
CMAKE_USE_PTHREADS ON
CMAKE_USE_RELATIVE_PATHS OFF
Page 4 of 15
CMAKE_USE_SPROC OFF
CMAKE_USE_WIN32_THREADS OFF
CMAKE_VERBOSE_MAKEFILE OFF
CMAKE_X_CFLAGS
CMAKE_X_LIBS
/usr/lib/x86_64-linux-gnu/libSM.so;/usr/lib/x
COVERAGE_COMMAND /usr/bin/gcov
COVERAGE_EXTRA_FLAGS -l
CTEST_SUBMIT_RETRY_COUNT 3
CTEST_SUBMIT_RETRY_DELAY 5
CVSCOMMAND CVSCOMMAND-NOTFOUND
CVS_UPDATE_OPTIONS -d -A -P
DART_TESTING_TIMEOUT 1500
EXODUSII_DISABLE_COMPILER_WARN ON
GITCOMMAND GITCOMMAND-NOTFOUND
HDF5_BUILD_CPP_LIB OFF
HDF5_BUILD_HL_LIB ON
HDF5_DISABLE_COMPILER_WARNINGS ON
Page 5 of 15
HDF5_ENABLE_HSIZET ON
HDF5_ENABLE_LARGE_FILE ON
HDF5_ENABLE_PARALLEL OFF
HDF5_ENABLE_SZIP_SUPPORT OFF
HDF5_ENABLE_Z_LIB_SUPPORT ON
HDF5_Enable_Clear_File_Buffers ON
HDF5_Enable_Instrument OFF
HDF5_METADATA_TRACE_FILE OFF
HDF5_STRICT_FORMAT_CHECKS OFF
HDF5_USE_16_API_DEFAULT OFF
HDF5_USE_FILTER_FLETCHER32 ON
HDF5_USE_FILTER_NBIT ON
HDF5_USE_FILTER_SCALEOFFSET ON
HDF5_USE_FILTER_SHUFFLE ON
HDF5_USE_H5DUMP_PACKED_BITS ON
HDF5_WANT_DATA_ACCURACY ON
HDF5_WANT_DCONV_EXCEPTION ON
Page 6 of 15
HGCOMMAND HGCOMMAND-NOTFOUND
JAVA_AWT_INCLUDE_PATH /usr/lib/jvm/java-6-openjdk-amd64/include
JAVA_AWT_LIBRARY
/usr/lib/jvm/java-6-openjdk-amd64/jre/lib/amd
JAVA_INCLUDE_PATH /usr/lib/jvm/java-6-openjdk-amd64/include
JAVA_INCLUDE_PATH2 /usr/lib/jvm/java-6-openjdk-amd64/include
JAVA_JVM_LIBRARY
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Java_JAR_EXECUTABLE /usr/bin/jar
Java_JAVAC_EXECUTABLE /usr/bin/javac
Java_JAVADOC_EXECUTABLE /usr/bin/javadoc
Java_JAVAH_EXECUTABLE /usr/bin/javah
Java_JAVA_EXECUTABLE /usr/bin/java
MAKECOMMAND /usr/bin/make -i
MEMORYCHECK_COMMAND MEMORYCHECK_COMMAND-NOTFOUND
MEMORYCHECK_SUPPRESSIONS_FILE
NETCDF4_CHUNK_CACHE_NELEMS 1009
NETCDF4_CHUNK_CACHE_PREEMPTION 0.75
NETCDF4_CHUNK_CACHE_SIZE 4194304
Page 7 of 15
NETCDF4_DEFAULT_CHUNKS_IN_CACH 10
NETCDF4_DEFAULT_CHUNK_SIZE 4194304
NETCDF4_MAX_DEFAULT_CACHE_SIZE 67108864
NETCDF_DISABLE_COMPILER_WARNIN ON
NETCDF_ENABLE_CXX ON
NETCDF_ENABLE_NETCDF4 ON
OPENGL_INCLUDE_DIR /usr/include
OPENGL_gl_LIBRARY /usr/lib/x86_64-linux-gnu/libGL.so
OPENGL_glu_LIBRARY /usr/lib/x86_64-linux-gnu/libGLU.so
OPENGL_xmesa_INCLUDE_DIR OPENGL_xmesa_INCLUDE_DIR-NOTFOUND
PROJ_LIST_EXTERNAL OFF
PROJ_USE_GSL OFF
PROJ_USE_PTHREADS OFF
PYTHON_EXECUTABLE /usr/bin/python
SCPCOMMAND /usr/bin/scp
SITE ilan-Len-G585
SLURM_SBATCH_COMMAND SLURM_SBATCH_COMMAND-NOTFOUND
Page 8 of 15
SLURM_SRUN_COMMAND SLURM_SRUN_COMMAND-NOTFOUND
SVNCOMMAND SVNCOMMAND-NOTFOUND
VERDICT_BUILD_DOC OFF
VERDICT_ENABLE_TESTING OFF
VERDICT_MANGLE ON
VERDICT_MANGLE_PREFIX vtk
VERDICT_USE_FLOAT OFF
VLI_LIBRARY_FOR_VP1000 VLI_LIBRARY_FOR_VP1000-NOTFOUND
VTK_BUILD_FORWARDING_EXECUTABL OFF
VTK_DATA_ROOT VTK_DATA_ROOT-NOTFOUND
VTK_DEBUG_LEAKS OFF
VTK_EXTRA_COMPILER_WARNINGS OFF
VTK_GLEXT_FILE
/home/ilan/ilan/vtk/Utilities/ParseOGLExt/hea
VTK_GLXEXT_FILE
/home/ilan/ilan/vtk/Utilities/ParseOGLExt/hea
VTK_IGNORE_BTX ON
VTK_INSTALL_THIRD_PARTY_LIBRAR OFF
VTK_LARGE_DATA_ROOT VTK_LARGE_DATA_ROOT-NOTFOUND
Page 9 of 15
VTK_LEGACY_REMOVE OFF
VTK_LEGACY_SILENT OFF
VTK_MATERIALS_DIRS
/home/ilan/ilan/vtk/Utilities/MaterialLibrary
VTK_MAX_THREADS 64
VTK_OPENGL_HAS_OSMESA OFF
VTK_TESTING_LOCALE
VTK_TESTING_USE_FPE ON
VTK_TESTING_USE_LOCALE OFF
VTK_USE_64BIT_IDS ON
VTK_USE_BOOST OFF
VTK_USE_CG_SHADERS OFF
VTK_USE_CHARTS ON
VTK_USE_CHEMISTRY OFF
VTK_USE_DISPLAY ON
VTK_USE_FFMPEG_ENCODER OFF
VTK_USE_GCC_VISIBILITY ON
VTK_USE_GEOVIS ON
Page 10 of 15
VTK_USE_GL2PS OFF
VTK_USE_GLSL_SHADERS ON
VTK_USE_GNU_R OFF
VTK_USE_GUISUPPORT OFF
VTK_USE_INFOVIS ON
VTK_USE_MANGLED_MESA OFF
VTK_USE_MATLAB_MEX OFF
VTK_USE_METAIO ON
VTK_USE_MPEG2_ENCODER OFF
VTK_USE_MYSQL OFF
VTK_USE_NVCONTROL OFF
VTK_USE_N_WAY_ARRAYS ON
VTK_USE_ODBC OFF
VTK_USE_OGGTHEORA_ENCODER OFF
VTK_USE_PARALLEL OFF
VTK_USE_POSTGRES OFF
VTK_USE_QT OFF
Page 11 of 15
VTK_USE_RENDERING ON
VTK_USE_SYSTEM_EXPAT OFF
VTK_USE_SYSTEM_FREETYPE OFF
VTK_USE_SYSTEM_HDF5 OFF
VTK_USE_SYSTEM_JPEG OFF
VTK_USE_SYSTEM_LIBPROJ4 OFF
VTK_USE_SYSTEM_LIBXML2 OFF
VTK_USE_SYSTEM_PNG OFF
VTK_USE_SYSTEM_TIFF OFF
VTK_USE_SYSTEM_ZLIB OFF
VTK_USE_TDX OFF
VTK_USE_TEXT_ANALYSIS OFF
VTK_USE_VIEWS ON
VTK_USE_VOLUMEPRO_1000 OFF
VTK_WGLEXT_FILE
/home/ilan/ilan/vtk/Utilities/ParseOGLExt/hea
VTK_WRAP_HINTS /home/ilan/ilan/vtk/Wrapping/hints
VTK_WRAP_JAVA ON
Page 12 of 15
VTK_WRAP_PYTHON OFF
VTK_WRAP_PYTHON_SIP OFF
VTK_WRAP_TCL OFF
X11_ICE_INCLUDE_PATH /usr/include
X11_ICE_LIB /usr/lib/x86_64-linux-gnu/libICE.so
X11_SM_INCLUDE_PATH /usr/include
X11_SM_LIB /usr/lib/x86_64-linux-gnu/libSM.so
X11_X11_INCLUDE_PATH /usr/include
X11_X11_LIB /usr/lib/x86_64-linux-gnu/libX11.so
X11_XRes_INCLUDE_PATH X11_XRes_INCLUDE_PATH-NOTFOUND
X11_XRes_LIB X11_XRes_LIB-NOTFOUND
X11_XShm_INCLUDE_PATH /usr/include
X11_XSync_INCLUDE_PATH /usr/include
X11_XTest_INCLUDE_PATH X11_XTest_INCLUDE_PATH-NOTFOUND
X11_XTest_LIB X11_XTest_LIB-NOTFOUND
X11_Xaccessrules_INCLUDE_PATH X11_Xaccessrules_INCLUDE_PATH-NOTFOUND
X11_Xaccessstr_INCLUDE_PATH /usr/include
Page 13 of 15
X11_Xau_INCLUDE_PATH /usr/include
X11_Xau_LIB /usr/lib/x86_64-linux-gnu/libXau.so
X11_Xcomposite_INCLUDE_PATH X11_Xcomposite_INCLUDE_PATH-NOTFOUND
X11_Xcomposite_LIB X11_Xcomposite_LIB-NOTFOUND
X11_Xcursor_INCLUDE_PATH X11_Xcursor_INCLUDE_PATH-NOTFOUND
X11_Xcursor_LIB X11_Xcursor_LIB-NOTFOUND
X11_Xdamage_INCLUDE_PATH /usr/include
X11_Xdamage_LIB /usr/lib/x86_64-linux-gnu/libXdamage.so
X11_Xdmcp_INCLUDE_PATH /usr/include
X11_Xdmcp_LIB /usr/lib/x86_64-linux-gnu/libXdmcp.so
X11_Xext_LIB /usr/lib/x86_64-linux-gnu/libXext.so
X11_Xfixes_INCLUDE_PATH /usr/include
X11_Xfixes_LIB /usr/lib/x86_64-linux-gnu/libXfixes.so
X11_Xft_INCLUDE_PATH X11_Xft_INCLUDE_PATH-NOTFOUND
X11_Xft_LIB X11_Xft_LIB-NOTFOUND
X11_Xi_INCLUDE_PATH X11_Xi_INCLUDE_PATH-NOTFOUND
X11_Xi_LIB X11_Xi_LIB-NOTFOUND
Page 14 of 15
X11_Xinerama_INCLUDE_PATH X11_Xinerama_INCLUDE_PATH-NOTFOUND
X11_Xinerama_LIB X11_Xinerama_LIB-NOTFOUND
X11_Xinput_INCLUDE_PATH X11_Xinput_INCLUDE_PATH-NOTFOUND
X11_Xinput_LIB X11_Xinput_LIB-NOTFOUND
X11_Xkb_INCLUDE_PATH /usr/include
X11_Xkbfile_INCLUDE_PATH X11_Xkbfile_INCLUDE_PATH-NOTFOUND
X11_Xkbfile_LIB X11_Xkbfile_LIB-NOTFOUND
X11_Xkblib_INCLUDE_PATH /usr/include
X11_Xlib_INCLUDE_PATH /usr/include
X11_Xmu_INCLUDE_PATH X11_Xmu_INCLUDE_PATH-NOTFOUND
X11_Xmu_LIB X11_Xmu_LIB-NOTFOUND
X11_Xpm_INCLUDE_PATH X11_Xpm_INCLUDE_PATH-NOTFOUND
X11_Xpm_LIB X11_Xpm_LIB-NOTFOUND
X11_Xrandr_INCLUDE_PATH X11_Xrandr_INCLUDE_PATH-NOTFOUND
X11_Xrandr_LIB X11_Xrandr_LIB-NOTFOUND
X11_Xrender_INCLUDE_PATH X11_Xrender_INCLUDE_PATH-NOTFOUND
X11_Xrender_LIB X11_Xrender_LIB-NOTFOUND
Page 15 of 15
X11_Xscreensaver_INCLUDE_PATH X11_Xscreensaver_INCLUDE_PATH-NOTFOUND
X11_Xscreensaver_LIB X11_Xscreensaver_LIB-NOTFOUND
X11_Xshape_INCLUDE_PATH /usr/include
X11_Xt_INCLUDE_PATH /usr/include
X11_Xt_LIB /usr/lib/x86_64-linux-gnu/libXt.so
X11_Xutil_INCLUDE_PATH /usr/include
X11_Xv_INCLUDE_PATH X11_Xv_INCLUDE_PATH-NOTFOUND
X11_Xv_LIB X11_Xv_LIB-NOTFOUND
X11_Xxf86misc_LIB X11_Xxf86misc_LIB-NOTFOUND
X11_Xxf86vm_LIB /usr/lib/x86_64-linux-gnu/libXxf86vm.so
X11_dpms_INCLUDE_PATH /usr/include
X11_xf86misc_INCLUDE_PATH X11_xf86misc_INCLUDE_PATH-NOTFOUND
X11_xf86vmode_INCLUDE_PATH /usr/include
--
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