[vtkusers] in java

[Sercani]

I think your CardiacCT dataset is from this site: 
http://pubimage.hcuge.ch:8080/   your dataset  is a 4D serie, try 
another serie from that site, for example manix : 
http://pubimage.hcuge.ch:8080/DATA/MANIX.zip

Gururajan wrote:
> ok, i will make sure the dicom reader path will have only one series in
> correct order of images
>
> and Please help me in , how can i make sure that my dicom files will not
> be multi frames?
>
> if possible can you attach some single frame dicom files?
>
> really very kind for your help in your valuable time
> namaste
> guru
>
>
> Sercani wrote:
>   
>> No, I mean Dicom reader path should contain only and only one serie in
>> correct order.And your dataset musn't be multi frames Dicom
>> dataset...Check out reader's documentation:
>> http://www.vtk.org/doc/nightly/html/classvtkDICOMImageReader.html
>>
>> Namaste...
>>
>> Gururajan wrote:
>>     
>>> you mean to say that  Dicom reader path should contain the series &
>>> images in order
>>>
>>> Am i right?
>>>  then i will arrange the order and the series,  then get back to you,
>>>
>>> thanks for your kind help.
>>> Namaste
>>> Guru
>>>
>>> Sercani wrote:
>>>  
>>>       
>>>> VTK Dicom reader is not a robust reader like gdcm, so you must be sure
>>>> that your dataset directory contains only one dicom serie and this
>>>> serie's image numbers must be in correct order...
>>>>
>>>>
>>>> Gururajan wrote:
>>>>    
>>>>         
>>>>> Hi
>>>>> Sercanfile:///home/gururaj/eclipse%20Project/SimpleVTK/SimpleVtk/src/DicomVTK/SimpleVTK.java
>>>>>
>>>>>
>>>>>
>>>>> i apologize for that, here after i will add vtkusers.
>>>>>
>>>>> the below code only i used in my java programme,
>>>>> the problem is
>>>>> "reader.SetDirectoryName(directoryPath); " is not reading the
>>>>> series of
>>>>> files, it reads only one file. that is my bug.
>>>>>
>>>>> Please help me on it.
>>>>>
>>>>> Thank  you so much. Please see the attached my main programme.
>>>>>
>>>>> once again thanks for your kind reply
>>>>> Guru
>>>>>
>>>>>
>>>>>
>>>>>
>>>>> vtkImageWriter writer = new vtkImageWriter();
>>>>> writer.SetInput(imageData);
>>>>> writer.SetFileName("image.vtk");
>>>>> writer.SetFileDimensionality(3); //for 3d datasets
>>>>> writer.Write();
>>>>>
>>>>> And you can read DICOM files like this:
>>>>>
>>>>> vtkDICOMImageReader reader = new vtkDICOMImageReader();
>>>>> reader.SetDirectoryName(directoryPath);
>>>>> reader.SetDataScalarTypeToUnsignedChar(); //or whatever you want
>>>>> reader.Update();
>>>>>
>>>>>
>>>>>
>>>>>
>>>>> Sercani wrote:
>>>>>  
>>>>>      
>>>>>           
>>>>>> Hi Guru;
>>>>>> Always remember to keep the discussion on vtk user list, don't forget
>>>>>> to add the vtkusers at vtk.org to your mail header...There a lot of
>>>>>> writers in vtk, for example if you want to write imagedata to .vtk
>>>>>> file you can use it like this:
>>>>>>
>>>>>> vtkImageWriter writer = new vtkImageWriter();
>>>>>> writer.SetInput(imageData);
>>>>>> writer.SetFileName("image.vtk");
>>>>>> writer.SetFileDimensionality(3); //for 3d datasets
>>>>>> writer.Write();
>>>>>>
>>>>>> And you can read DICOM files like this:
>>>>>>
>>>>>> vtkDICOMImageReader reader = new vtkDICOMImageReader();
>>>>>> reader.SetDirectoryName(directoryPath);
>>>>>> reader.SetDataScalarTypeToUnsignedChar(); //or whatever you want
>>>>>> reader.Update();
>>>>>>
>>>>>> I don't use itk, so i don't have the jar...
>>>>>> Namaste
>>>>>> Sercan...
>>>>>>
>>>>>>
>>>>>>
>>>>>> Gururajan wrote:
>>>>>>           
>>>>>>             
>>>>>>> hi Sercan,
>>>>>>>
>>>>>>> Thanks for your kind reply .
>>>>>>>
>>>>>>> Actually i have Vtk.jar , and i configure in Eclipse environment,
>>>>>>> My objective is
>>>>>>>
>>>>>>>     I haveto  read series of dicom files and then convert into 3d
>>>>>>> format
>>>>>>> (.vtk) or any format to display that readed files in 3D view.
>>>>>>>
>>>>>>> i have configured the vtk.jar in eclipse.
>>>>>>>
>>>>>>> Please help me, or if u have itk.jar plz give it to me.
>>>>>>> Thank you so much
>>>>>>> Namaste
>>>>>>> Guru Rajan.r
>>>>>>>
>>>>>>>
>>>>>>> Sercani wrote:
>>>>>>>  
>>>>>>>               
>>>>>>>               
>>>>>>>> Hi Guru,
>>>>>>>> What do you exactly mean by 3d view? MIP? MINIP? VRT? SSD? MPR?
>>>>>>>> Have
>>>>>>>> you built vtk with java wrapping on?
>>>>>>>> Namaste,
>>>>>>>> Sercan...
>>>>>>>>
>>>>>>>>
>>>>>>>> Gururajan wrote:
>>>>>>>>                      
>>>>>>>>                 
>>>>>>>>> Hi all,
>>>>>>>>>
>>>>>>>>> am a programmer in java, i want to read dicom series of files &
>>>>>>>>> then it
>>>>>>>>> should display in 3d view using Vtk.
>>>>>>>>>
>>>>>>>>> Please any one can help me.
>>>>>>>>>
>>>>>>>>> Thanks
>>>>>>>>> Guru
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>>>>>>>>>
>>>>>>>>>                                 
>>>>>>>>>                   
>>>>>>>                   
>>>>>>>               
>>>>>         
>>>>>           
>>>   
>>>       
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