[vtkusers] Problems with vtk and matlab

Dominik Szczerba domi at vision.ee.ethz.ch
Mon Nov 26 11:29:48 EST 2007


Pls keep discussion on list.

Wait a sec, the gcc version complaint is just a warning, the error comes from:

gcc: ...: No such file or directory

What does 'gcc' say typed raw on the command line?

Sounds like a trivial problem to solve (wrong name / path or so).

PS. Do not count on help from the Mathworks here.

-- Dominik



On Monday 26 November 2007 16.55:06 Corinne Bachmann wrote:
> Hi
>
> Thanks for your fast answer. I was trying to install an older version of
> gcc, but apparently 4.2.1 is the oldest version for Suse 10.3. I did not
> find any rpm file for an older version anywhere yet. I am not sure how
> to solve my problem yet.
> I was thinking that this limitation might come from Matlab, but help
> from Matlab is rather rare.
>
> --Corinne
>
> On Mon, 2007-11-26 at 11:37 +0100, Dominik Szczerba wrote:
> > Yes, the first thing I would try is the older version of gcc. If you are
> > on linux this is trivial, just make sure the older version is installed
> > in the system (easy on most platforms) and edit the mex configuration
> > script to replace gcc / g++ with things like gcc-4.0 or so.
> > On Windows I have no idea, but can not imagine this is not possible.
> > Note, this limitation comes from Matlab.
> > bye
> > -- Dominik
> >
> > On Monday 26 November 2007 11.03:18 Corinne Bachmann wrote:
> > > Hi all
> > >
> > > I am trying to export data from matlab to a vtk format to be able to
> > > view my data in paraview. It will be a volume with different values to
> > > display.
> > > I was trying the instructions from
> > > http://www.vtk.org/Wiki/VTK/VTKMatlab, but this did not work for me. I
> > > got the following answer:
> > > ----------------------------------------------------------------------
> > >
> > > >>mex -O -I/usr/local/include/vtk-5.0/ vtkPolyDataRenderer.cpp
> > >
> > > -L/usr/local/lib/vtk-5.0 -lvtkFiltering -lvtkRendering
> > >
> > > Warning: You are using gcc version "4.2.1".  The earliest gcc version
> > > supported
> > > with mex is "4.0.0".  The latest version tested for use with mex is
> > > "4.2.0".
> > > To download a different version of gcc, visit http://gcc.gnu.org
> > > In file included from /usr/include/c++/4.2.1/backward/strstream:51,
> > >                  from /usr/local/include/vtk-5.0/vtkIOStream.h:36,
> > >                  from
> > > /usr/local/include/vtk-5.0/vtkSystemIncludes.h:40, from
> > > /usr/local/include/vtk-5.0/vtkIndent.h:24, from
> > > /usr/local/include/vtk-5.0/vtkObjectBase.h:43, from
> > > /usr/local/include/vtk-5.0/vtkObject.h:41, from
> > > /usr/local/include/vtk-5.0/vtkDataObject.h:35, from
> > > /usr/local/include/vtk-5.0/vtkDataSet.h:40, from
> > > /usr/local/include/vtk-5.0/vtkPointSet.h:29, from
> > > /usr/local/include/vtk-5.0/vtkPolyData.h:57, from
> > > vtkPolyDataRenderer.cpp:12:
> > > /usr/include/c++/4.2.1/backward/backward_warning.h:32:2: warning:
> > > #warning This file includes at least one deprecated or antiquated
> > > header. Please consider using one of the 32 headers found in section
> > > 17.4.1.2 of the C++ standard. Examples include substituting the <X>
> > > header for the <X.h> header for C++ includes, or <iostream> instead of
> > > the deprecated header <iostream.h>. To disable this warning use
> > > -Wno-deprecated.
> > > gcc: ...: No such file or directory
> > >
> > >     mex: compile of '/opt/usr/matlab/extern/src/mexversion.c' failed.
> > > -----------------------------------------------------------------------
> > >---- -
> > >
> > > Do I really need to download an older version of gcc or is there
> > > another way?
> > > Thanks for any help in advance.
> > >
> > > Corinne
> > >
> > > _______________________________________________
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-- 
Dominik Szczerba, Ph.D.
Computer Vision Lab CH-8092 Zurich
http://www.vision.ee.ethz.ch/~domi



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