[vtkusers] More problems with MPI & VTK

[Naveen Kumar Polapally]

hi,
thanks for that pointer, but some new problem I am getting these errors 
now.which seem to be problems related to mpi.Can you have a look at it and 
tell me if you are familiar with this.


make[1]: Entering directory `/home/devel/vtk/vtk/tcl'
c++ -o vtk tkAppInit.o \
-L. -g -O2  -fPIC -D_HP_NO_FAST_MACROS -DHAVE_LIMITS_H -DHAVE_UNISTD_H -I. 
-I./../common -I/home/3/polapall/tk/tk8.0/generic 
-I/home/3/polapall/tcl/tcl8.0/generic -DVTK_USE_TKWIDGET 
-I/home/3/polapall/Mesa1/Mesa-3.1/include/ -DVTK_USE_MESA   
-I/usr/X11R6/include 
-I/home/devel/mpich-1.1.2..13-gm/build/LINUX/ch_gm/include/c++ 
-I/home/devel/mpich-1.1.2..13-gm/include/ -DVTK_USE_MPI -I./../graphics 
-DVTK_USE_GRAPHICS -I./../imaging -DVTK_USE_IMAGING -I./../patented 
-DVTK_USE_PATENTED -I./../contrib -DVTK_USE_CONTRIB  -rdynamic   
-L/home/devel/vtk/vtk/contrib -lVTKContribTcl -lVTKContrib  
-L/home/devel/vtk/vtk/patented -lVTKPatentedTcl -lVTKPatented 
-L/home/devel/vtk/vtk/imaging -lVTKImagingTcl -lVTKImaging 
-L/home/devel/vtk/vtk/graphics -lVTKGraphicsTcl -lVTKGraphics -L../common 
-lVTKCommonTcl -lVTKCommon -L/usr/X11R6/lib 
/home/3/polapall/Mesa1/Mesa-3.1/lib/libGL.so 
/home/3/polapall/Mesa1/Mesa-3.1/lib/libGLU.so 
/home/devel/mpich-1.1.2..13-gm/build/LINUX/ch_gm/lib/libmpich.a  
/home/devel/mpich-1.1.2..13-gm/build/LINUX/ch_gm/lib/libmpich++.a 
/home/devel/mpich-1.1.2..13-gm/build/LINUX/ch_gm/lib/libpmpich.a 
/usr/lib/libtk8.0.so /usr/lib/libtcl8.0.so -ldl  \
-L/usr/X11R6/lib -lXext -lXt -lSM -lICE -lX11  -lm
/home/devel/mpich-1.1.2..13-gm/build/LINUX/ch_gm/lib/libmpich.a(bsendutil2.o): 
In function `MPIR_BsendAlloc':
bsendutil2.o(.text+0x2fa): undefined reference to `__bzero'
/home/devel/mpich-1.1.2..13-gm/build/LINUX/ch_gm/lib/libmpich.a(bsendutil2.o): 
In function `MPIR_IbsendDatatype':
bsendutil2.o(.text+0x4ff): undefined reference to `__bzero'
/home/devel/mpich-1.1.2..13-gm/build/LINUX/ch_gm/lib/libmpich.a(gmpriv.o): 
In function `post_recv_now':
gmpriv.o(.text+0x97): undefined reference to `_gm_assertion_failed'
/home/devel/mpich-1.1.2..13-gm/build/LINUX/ch_gm/lib/libmpich.a(gmpriv.o): 
In function `gmpi_queue_recv':
gmpriv.o(.text+0x168): undefined reference to `_gm_assertion_failed'
/home/devel/mpich-1.1.2..13-gm/build/LINUX/ch_gm/lib/libmpich.a(gmpriv.o): 
In function `gmpi_queue_send':
gmpriv.o(.text+0x24c): undefined reference to `_gm_assertion_failed'
gmpriv.o(.text+0x25a): undefined reference to `gm_bcopy'
gmpriv.o(.text+0x2d8): undefined reference to `_gm_assertion_failed'
/home/devel/mpich-1.1.2..13-gm/build/LINUX/ch_gm/lib/libmpich.a(gmpriv.o): 
In function `gmpi_datafrag_complete':
gmpriv.o(.text+0x387): undefined reference to `_gm_assertion_failed'
/home/devel/mpich-1.1.2..13-gm/build/LINUX/ch_gm/lib/libmpich.a(gmpriv.o): 
In function `gmpi_ctl_alloc':
gmpriv.o(.text+0x408): undefined reference to `gm_max_length_for_size'
gmpriv.o(.text+0x414): undefined reference to `gm_dma_malloc'
gmpriv.o(.text+0x448): undefined reference to `_gm_assertion_failed'
/home/devel/mpich-1.1.2..13-gm/build/LINUX/ch_gm/lib/libmpich.a(gmpriv.o): 
In function `gmpi_ctlrecv_event':
gmpriv.o(.text+0x70d): undefined reference to `_gm_assertion_failed'
/home/devel/mpich-1.1.2..13-gm/build/LINUX/ch_gm/lib/libmpich.a(gmpriv.o): 
In function `gmpi_datarecv_event':
gmpriv.o(.text+0x77d): undefined reference to `_gm_assertion_failed'
/home/devel/mpich-1.1.2..13-gm/build/LINUX/ch_gm/lib/libmpich.a(gmpriv.o): 
In function `MPID_CH_Check_incoming':
gmpriv.o(.text+0x853): undefined reference to `_gm_assertion_failed'
gmpriv.o(.text+0x867): undefined reference to `gm_bcopy'
/home/devel/mpich-1.1.2..13-gm/build/LINUX/ch_gm/lib/libmpich.a(gmpriv.o): 
In function `gmpi_finish':



> > I have given the correct paths in user.make as below.
> >
> > 
>MPI_INCLUDE=-I/home/devel/mpich-1.1.2..13-gm/build/LINUX/ch_gm/include/c++
> > -I/home/devel/mpich-1.1.2..13-gm/include/
> > MPI_LIB=/home/devel/mpich-1.1.2..13-gm/build/LINUX/ch_gm/lib/libmpich.a
> > /home/devel/mpich-1.1.2..13-gm/build/LINUX/ch_gm/lib/libmpich++.a
> > /home/devel/mpich-1.1.2..13-gm/build/LINUX/ch_gm/lib/libpmpich.a
>
>That should be MPI_LIBS - you forgot the 'S'. Otherwise everything looks
>ok.
>
>Looks like you're using mpich-gm 1.1.2. If you're using SMP machines you
>might want to upgrade to 1.2, as it supports communication via shared
>memory between processors on the same host.
>
>Jason
>
>--
>Jason Rappleye
>Research Programmer, UB Center for Computational Research
>rappleye at ccr.buffalo.edu		rappleye at hwi.buffalo.edu
>http://www.ccr.buffalo.edu/jason.htm
>
>
>
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