[Tubetk-developers] [Insight-users] I want to segment blood vessels from a series of picture with ITK , please help me

[Douglas Souza]

Team,

Would the objectives of the tubetk also be applicable to the highly
complex mesh of blood vessel microscopic images from a cancer bright
field sample ?

A little different from high-level tube structures I have seen, these
ones have huge amounts of junctions, biffurcation and segments that
are not that visible because of the tissue cut and difficulty to
segment the image.

Regards,
Doug



On Thu, Aug 1, 2013 at 11:24 PM, Matt McCormick
<matt.mccormick at kitware.com> wrote:
> Hi,
>
> Here[1] is a very simple brain vessel segmentation example.
>
> For more advanced vessel segmentation methods, you may want to try
> TubeTK[2], which supports analysis and visualization with the ITK and
> VTK based 3DSlicer[3].
>
> Thanks,
> Matt
>
> [1] http://itk.org/ITKExamples/src/Filtering/ImageFeature/SegmentBloodVessels/Documentation.html
> [2] http://tubetk.org/
> [3] http://slicer.org/
>
> On Fri, Jul 26, 2013 at 9:19 PM, 章强 <15891495523 at 126.com> wrote:
>> Hello :
>>       there is a series of dcm format files which is the results of scanning
>> the brain . I want to segment blood vessels from these files with ITK , and
>> show it with VTK . Please give me a simple case . I have a  problem with
>> this project .
>>       how can I segment a specified region ? I know that ITK provide some
>> segmentation algorithm  , but they need the Index of seeds . Can I show the
>> picture with VTK fristly ,and then point out a seed in the picture ? And if
>> there are some algorithms which can segment volume data ?
>>
>>
>> 来自网易手机号码邮箱了解更多
>>
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> _____________________________________
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>
> Visit other Kitware open-source projects at
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>
> Kitware offers ITK Training Courses, for more information visit:
> http://www.kitware.com/products/protraining.php
>
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