[Tubetk-developers] runtime error

Sun Feb 2 17:40:51 EST 2014

Stephen,

I did what you suggested. However, after step 3) and choose 'configure' in
ccmake, I got the same error message that I reported to you in a different
email thread.  The error is:

 CMake Error at
/home/sci/weiliu/packages/Slicer/CMake/SlicerBlockFindQtAndCheckVersion.cmake:43
(message):
   error: Missing Qt module QTWEBKIT
 Call Stack (most recent call first):

 /home/sci/weiliu/packages/Slicer/CMake/SlicerBlockFindQtAndCheckVersion.cmake:72
(__SlicerBlockFindQtAndCheckVersion_find_qt)

 /home/sci/weiliu/projects/Slicer-SuperBuild-Rel/Slicer-build/SlicerConfig.cmake:760
(include)
   CMakeLists.txt:175 (find_package)

I've made sure that I start from an empty build directory. By the way, my
Slicer build is a good one. I used a customized QT SDK (version 474) from
[1].

[1]
http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Developers/Build_Instructions/Prerequisites/Qt#Download_Qt:_Source_and_Binaries

Wei

On Sun, Feb 2, 2014 at 1:40 PM, Stephen Aylward <stephen.aylward at kitware.com
> wrote:

> Only options to change are
>
> 1) TubeTK_BUILD_SLICER_EXTENSION = ON
> 2) TubeTK_USE_SLICER = ON
>
> Then type [c] to configure.  This will produce an error message if
> Slicer isn't automatically found...so
>
> 3) Slicer_DIR = <YourPathToSlicerBuild>/Slicer-build
> -- Yes, point it to the Slicer-build subdir that is within the
> top-level directory in which Slicer was built.
>
> Do not change any other options.
>
> You should do this in an empty build directory.  There are likely to
> be problems if you try to switch a current build from being a
> stand-alone build to being a Slicer-dependent build.
>
> s
>
>
> On Sun, Feb 2, 2014 at 2:49 PM, Wei Liu <weiliu620 at gmail.com> wrote:
> > Thanks, Matt and Stephen. I checked the CmakeOutput.log file under
> VTK-build
> > and didn't find any errors. Is that the best way to check build logs?
> >
> > I do have a recent Slicer build that includes VTK. Let me try to point
> > TubeTK to it and see what happens.
> >
> > Wei
> >
> >
> > On Sun, Feb 2, 2014 at 12:34 PM, Stephen Aylward
> > <stephen.aylward at kitware.com> wrote:
> >>
> >> Also, Ricardo is building it on opensuse.   It seems to be failing on
> the
> >> vtk build.  Perhaps try building vtk on its own via vtk.org or build
> slicer
> >> and point tubetk to it...see slicer.org
> >>
> >> S
> >>
> >> --
> >> Sent via phone.  Please excuse the brevity and typos.
> >>
> >> --
> >> Stephen R. Aylward, Ph.D.
> >> Senior Director of Operations
> >> Kitware, North Carolina
> >>
> >> On Feb 2, 2014 2:31 PM, "Matt McCormick" <matt.mccormick at kitware.com>
> >> wrote:
> >>>
> >>> Hi Wei,
> >>>
> >>> Builds reporting to the dashboard should be reproducible (there is
> >>> Debian Stable and Ubuntu 12.04 and 13.04 reporting):
> >>>
> >>>   http://open.cdash.org/index.php?project=TubeTK
> >>>
> >>> If further help is needed, we can give personalized attention with a
> >>> support contract:
> >>>
> >>>   http://www.kitware.com/products/support.html
> >>>
> >>> Thanks,
> >>> Matt
> >>>
> >>> On Sun, Feb 2, 2014 at 11:51 AM, Wei Liu <weiliu620 at gmail.com> wrote:
> >>> > Oops, I sent previous email before finishing it.
> >>> >
> >>> > Yes Matt, I meant TubeTK_USE_VTK.  So, I started a clean build, with
> >>> > all
> >>> > cmake options set to default (the UtbeT_USE_VTK = ON). Now I have
> >>> > different
> >>> > errors:
> >>> >
> >>> > ./CropImage: symbol lookup error:
> >>> >
> >>> >
> /home/sci/weiliu/packages/TubeTK-Release/VTK-build/bin/libvtkInfovis.so.5.10:
> >>> > undefined symbol: _ZTI8vtkArray
> >>> >
> >>> > I don't remember the exact difference between this build and the
> >>> > previous
> >>> > one. The difference may be some Cmake options.
> >>> >
> >>> > Do you suggest me to use another OS, like ubuntu or Redhat-based OS?
> >>> >
> >>> > Wei
> >>> >
> >>> >
> >>> >
> >>> > On Fri, Jan 31, 2014 at 5:46 PM, Matt McCormick
> >>> > <matt.mccormick at kitware.com>
> >>> > wrote:
> >>> >>
> >>> >> Hmm, the only variable that should be adjusted should be called
> >>> >> TubeTK_USE_VTK.
> >>> >>
> >>> >> Starting a clean build with the defaults is good first step.
> >>> >>
> >>> >> Thanks,
> >>> >> Matt
> >>> >>
> >>> >> On Fri, Jan 31, 2014 at 7:35 PM, Wei Liu <weiliu620 at gmail.com>
> wrote:
> >>> >> > Matt,
> >>> >> >
> >>> >> > I didn't install VTK in the system, and I double checked the
> >>> >> > /usr/lib
> >>> >> > and
> >>> >> > lib64 directory.
> >>> >> >
> >>> >> > I built with the USE_VTK set to off. Is that a possible reason?
> I'm
> >>> >> > re-building TubeTK with it on now.
> >>> >> >
> >>> >> > Wei
> >>> >> >
> >>> >> >
> >>> >> >
> >>> >> >
> >>> >> > On Fri, Jan 31, 2014 at 4:08 PM, Matt McCormick
> >>> >> > <matt.mccormick at kitware.com>
> >>> >> > wrote:
> >>> >> >>
> >>> >> >> Hi Wei,
> >>> >> >>
> >>> >> >> This is not expected.  Is a system VTK installed?
> >>> >> >>
> >>> >> >> Thanks,
> >>> >> >> Matt
> >>> >> >>
> >>> >> >>
> >>> >> >>
> >>> >> >> On Fri, Jan 31, 2014 at 5:58 PM, Wei Liu <weiliu620 at gmail.com>
> >>> >> >> wrote:
> >>> >> >> > Dear TubeTK developers,
> >>> >> >> >
> >>> >> >> > I've successfully built TubeTK in release mode. But when I try
> to
> >>> >> >> > run
> >>> >> >> > one of
> >>> >> >> > the commands in TubeTK-build/bin/ I got the following error:
> >>> >> >> >
> >>> >> >> > ./CropImage: symbol lookup error:
> >>> >> >> >
> >>> >> >> >
> >>> >> >> >
> >>> >> >> >
> /home/sci/weiliu/packages/TubeTK-Release/VTK-build/bin/libvtkInfovis.so.5.10:
> >>> >> >> > undefined symbol: _ZTI21vtkArrayDataAlgorithm
> >>> >> >> >
> >>> >> >> > I'm using gcc 4.7.1 under opensuse 12.2 64 bit. And I just let
> >>> >> >> > tubetk
> >>> >> >> > to
> >>> >> >> > build everything including ITK and VTK. Actually I got the same
> >>> >> >> > error
> >>> >> >> > when
> >>> >> >> > trying to run other commands.
> >>> >> >> >
> >>> >> >> > Is this error expected at this stage of development?
> >>> >> >> >
> >>> >> >> > Thanks,
> >>> >> >> > Wei
> >>> >> >> >
> >>> >> >> > _______________________________________________
> >>> >> >> > Tubetk-developers mailing list
> >>> >> >> > Tubetk-developers at tubetk.org
> >>> >> >> >
> >>> >> >> >
> http://public.kitware.com/cgi-bin/mailman/listinfo/tubetk-developers
> >>> >> >> >
> >>> >> >
> >>> >> >
> >>> >
> >>> >
> >>> _______________________________________________
> >>> Tubetk-developers mailing list
> >>> Tubetk-developers at tubetk.org
> >>> http://public.kitware.com/cgi-bin/mailman/listinfo/tubetk-developers
> >
> >
>
>
>
> --
>
> ====================================================
> Stephen R. Aylward, Ph.D.
> Senior Director of Operations, North Carolina, Kitware, Inc.
> http://www.kitware.com
> http://www.aylward.org
> (919) 969-6990 x300
> ====================================================
>
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