[Rtk-users] ITK-RTK python install issues

[Simon Rit]

Yes, sorry, we need to release binaries compatible with the latest ITK.
Alternatively, you can downgrade the ITK packages to the v5.1.0 (maybe) or
v5.0.1 (for sure) versions. Sorry for the trouble...
Simon

On Tue, Nov 24, 2020 at 4:22 PM Bleeker, M. (Margot) <
m.bleeker at amsterdamumc.nl> wrote:

> Thanks! Your suggestion worked!
>
>
>
> Margot
>
>
>
> *From:* Nils Krah <nils.krah at creatis.insa-lyon.fr>
> *Sent:* dinsdag 24 november 2020 15:51
> *To:* Bleeker, M. (Margot) <m.bleeker at amsterdamumc.nl>
> *Cc:* rtk-users at public.kitware.com
> *Subject:* Re: [Rtk-users] ITK-RTK python install issues
>
>
>
> I had a similar issue some days ago and Simon suggested to download a
> recently built wheel from github:
>
> ​https://github.com/SimonRit/RTK/actions/runs/341384403
> <https://eur04.safelinks.protection.outlook.com/?url=https%3A%2F%2Fgithub.com%2FSimonRit%2FRTK%2Factions%2Fruns%2F341384403&data=04%7C01%7Cm.bleeker%40amsterdamumc.nl%7C2f84671ee1b94590ddb408d8908863ff%7C68dfab1a11bb4cc6beb528d756984fb6%7C0%7C0%7C637418262748788557%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C1000&sdata=%2Bxn3aVBWVSJWK0unA5DEejKJ8vY%2F8RGQmj%2BWleIJ6hs%3D&reserved=0>
>
> ​(you need to be logged in to github)
>
> ​
>
> download the appropriate file and run
>
> ​pip install <FILENAME>​
>
> ​locally.
>
> ​Or
>
> ​python -m pip install <FILENAME>
>
> ​
>
> ​Solved the issue for me on MacOS.
>
> ​
>
> ​Simon might correct me if I am writing bogus here.
>
> ​
>
> Cheers
>
> ​Nils
>
> ​
>
> ​
>
> On Nov 24 2020, at 3:33 pm, Bleeker, M. (Margot) <
> m.bleeker at amsterdamumc.nl> wrote:
>
> Hello,
>
>
>
> I am new to ITK and RTK and I’m trying to use the itk-rtk python package.
> I set up a new environment with python 3.7 (with Conda) on Windows 10 and
> ran:
>
>
>
> Pip install itk-rtk
>
>
>
> I could import both packages, but I got the following error when I ran the
> example FirstReconstruction.py:
>
>
>
> ‘’
>
> Traceback (most recent call last):
>
>   File "D:\Program
> files\RTK-master\examples\FirstReconstruction\FirstReconstruction.py", line
> 14, in <module>
>
>     geometry = rtk.ThreeDCircularProjectionGeometry.New()
>
>   File "D:\Python\envs\CBreconstruct\lib\site-packages\itkLazy.py", line
> 52, in __getattribute__
>
>     itkBase.LoadModule(module, namespace)
>
>   File "D:\Python\envs\CBreconstruct\lib\site-packages\itkBase.py", line
> 99, in LoadModule
>
>     module = loader.load(swig_module_name)
>
>   File "D:\Python\envs\CBreconstruct\lib\site-packages\itkBase.py", line
> 220, in load
>
>     module.__loader__.exec_module(module)
>
>   File "<frozen importlib._bootstrap_external>", line 728, in exec_module
>
>   File "<frozen importlib._bootstrap>", line 219, in
> _call_with_frames_removed
>
>   File "D:\Python\envs\CBreconstruct\lib\site-packages\itk\RTKPython.py",
> line 119, in <module>
>
>     from itkFixedArrayRTKPython import *
>
>   File
> "D:\Python\envs\CBreconstruct\lib\site-packages\itk\Configuration\..\itkFixedArrayRTKPython.py",
> line 106, in <module>
>
>     import pyBasePython
>
>   File
> "D:\Python\envs\CBreconstruct\lib\site-packages\itk\Configuration\..\pyBasePython.py",
> line 8, in <module>
>
>     from . import _ITKPyBasePython
>
> ImportError: attempted relative import with no known parent package
>
> ‘’
>
>
>
> Does anyone know how to solve this issue?
>
>
>
> Thanks
>
>
>
> Sincerely,
>
> Margot Bleeker
>
>
>
>
>
>
>
> *Margot Bleeker, MSc.|*  PhD student (OiO)
>
> Afdeling Radiotherapie
>
> Locatie AMC | Z1-217 | Meibergdreef 9, 1105 AZ Amsterdam
>
> T: +31 20 566 7974|  E: m.bleeker at amsterdamumc.nl
>
> www.amsterdamumc.nl  |  *www.vumc.nl <http://www.vumc.nl/>* / www.amc.nl
>
>
>
> ______________________________________________________
>
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>
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>
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