[Rtk-users] GPU support of PyPI package

Andreas Andersen andreasga22 at gmail.com
Wed Aug 21 10:12:42 EDT 2019


Hi Clemens
You can use the CMake variable, REMOTE_GIT_TAG_RTK, to set the tag of RTK
you want to use, e.g. master
I think the default value is v2.0.1

Best regards
Andreas

__________________________________

Andreas Gravgaard Andersen

Danish Center for Particle Therapy,

Aarhus University Hospital

Palle Juul-Jensens Blvd. 99,

8200, Aarhus

Mail:     agravgaard at protonmail.com

Cell:      +45 3165 8140


On Tue, 20 Aug 2019 at 20:01, C S <clem.schmid at gmail.com> wrote:

> Hi Simon,
>
> I have a follow up question: When installing RTK as an ITK module as per
> your suggestion, which RTK version is used? Is the latest release (2.0.1)
> bundled with ITK or is the newest RTK pulled from Github?
>
> I ask this because I have a feeling I would benefit from using this commit
> <https://github.com/SimonRit/RTK/commit/99a6626f42e6654d11a780127610c95d3c1a063e> and
> am wondering what's the best pratice to install it.
>
>
> Thank you very much
> Clemens
>
> On Wed, Jul 3, 2019 at 2:12 AM Simon Rit <simon.rit at creatis.insa-lyon.fr>
> wrote:
>
>> You never need this option except for using ExtractPhaseImageFilter
>> <http://www.openrtk.org/Doxygen/classrtk_1_1ExtractPhaseImageFilter.html>
>> but it makes the CPU version faster. So you don't need it if you only use
>> the GPU version of FDK. I don't know anlything about ITK_USE_CUFFTW, it's a
>> recent option I've never used...
>> Cheers,
>> Simon
>>
>> On Tue, Jul 2, 2019 at 11:01 PM C S <clem.schmid at gmail.com> wrote:
>>
>>> Hi Simon,
>>>
>>> thank you very much for your swift answer!
>>>
>>> If compiling for GPU, I don't need ITK_USE_FFTWD or ITK_USE_FFTWF,
>>> right? Would you recommend using ITK_USE_CUFFTW?
>>>
>>>
>>> Best
>>> Clemens
>>>
>>> Am Di., 2. Juli 2019 um 11:56 Uhr schrieb Simon Rit <
>>> simon.rit at creatis.insa-lyon.fr>:
>>>
>>>> Hi,
>>>> No yet! We aim at proposing this soon but it's not ready. The best
>>>> practice is to build from ITK, turn on Module_RTK, RTK_USE_CUDA and
>>>> ITK_WRAP_PYTHON.
>>>> Someone has already requested a proper compilation doc, we'll work on
>>>> it asap, sorry for the inconvenience.
>>>> Simon
>>>>
>>>> On Tue, Jul 2, 2019 at 5:51 PM C S <clem.schmid at gmail.com> wrote:
>>>>
>>>>> Dear RTK users,
>>>>>
>>>>> is there a possibility to get GPU support within RTK from the PyPI
>>>>> package "itk-rtk"?
>>>>> https://pypi.org/project/itk-rtk/
>>>>>
>>>>> If not, what is the current "best practice" building RTK with GPU and
>>>>> Python bindings? I'm on Ubuntu 18.04 with CUDA 10.0.
>>>>>
>>>>>
>>>>> Thank you very much for your help!
>>>>> Clemens
>>>>> _______________________________________________
>>>>> Rtk-users mailing list
>>>>> Rtk-users at public.kitware.com
>>>>> https://public.kitware.com/mailman/listinfo/rtk-users
>>>>>
>>>> _______________________________________________
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