[Paraview] Paraview v5.0.0-rc2 with OpenGL2 backend failing to start in parallel
Cory Quammen
cory.quammen at kitware.com
Mon Dec 21 10:03:28 EST 2015
Frank,
Upon further review, the source code turns out to be fine. There is likely
an issue with the unified python bindings. I've posted a bug report here:
http://www.paraview.org/Bug/view.php?id=15896
Cory
On Sat, Dec 19, 2015 at 12:42 AM, Cory Quammen <cory.quammen at kitware.com>
wrote:
> Frank,
>
> It does indeed look like there was a problem with the source code
> packaging.
>
> A fix has been merged into the packaging script:
>
> https://gitlab.kitware.com/paraview/paraview/merge_requests/541
>
> Thanks for helping us find it by pointing out the problem. We'll get an
> updated tar file posted sometime soon.
>
> Cory
>
> On Fri, Dec 18, 2015 at 2:52 PM, Cory Quammen <cory.quammen at kitware.com>
> wrote:
>
>> Hi Frank,
>>
>> The official binaries of 5.0.0-RC1 on Mac work fine for me the way you
>> tried. Everything works fine on the master branch as well
>>
>> However, when I build the same configuration as you for the 5.0.0-RC2 tar
>> file on the downloads page of www.paraview.org on a Mac, I get a similar
>> error and a crash in the client. Partial stack trace from the client:
>>
>> 0 org.python.python 0x0000000109b6a1b6 PyObject_Call + 23
>> 1 org.python.python 0x0000000109be8e83
>> PyEval_CallObjectWithKeywords + 165
>> 2 libvtkClientServer-pv5.0.1.dylib 0x000000010715c253
>> CommandFunctionCallback(vtkClientServerInterpreter*, vtkObjectBase*, char
>> const*, vtkClientServerStream const&, vtkClientServerStream&, void*) + 3971
>> 3 libvtkClientServer-pv5.0.1.dylib 0x000000010714600b
>> vtkClientServerInterpreter::CallCommandFunction(char const*,
>> vtkObjectBase*, char const*, vtkClientServerStream const&,
>> vtkClientServerStream&) + 155
>> 4 libvtkClientServer-pv5.0.1.dylib 0x000000010714493b
>> vtkClientServerInterpreter::ProcessCommandInvoke(vtkClientServerStream
>> const&, int) + 331
>> 5 libvtkClientServer-pv5.0.1.dylib 0x0000000107143c45
>> vtkClientServerInterpreter::ProcessOneMessage(vtkClientServerStream const&,
>> int) + 741
>> 6 libvtkClientServer-pv5.0.1.dylib 0x000000010714392d
>> vtkClientServerInterpreter::ProcessStream(vtkClientServerStream const&) + 45
>> 7 libvtkPVServerImplementationCore-pv5.0.1.dylib 0x0000000106e3c744
>> vtkSIProperty::ProcessMessage(vtkClientServerStream&) + 52
>> 8 libvtkPVServerImplementationCore-pv5.0.1.dylib 0x0000000106e3bf8e
>> vtkSIVectorPropertyTemplate<int, int>::Push(int*, int) + 654
>> 9 libvtkPVServerImplementationCore-pv5.0.1.dylib 0x0000000106e3ba1f
>> vtkSIVectorPropertyTemplate<int, int>::ReadXMLAttributes(vtkSIProxy*,
>> vtkPVXMLElement*) + 271
>> 10 libvtkPVServerImplementationCore-pv5.0.1.dylib 0x0000000106e3eeb6
>> vtkSIProxy::ReadXMLProperty(vtkPVXMLElement*) + 742
>> 11 libvtkPVServerImplementationCore-pv5.0.1.dylib 0x0000000106e3e9ed
>> vtkSIProxy::ReadXMLAttributes(vtkPVXMLElement*) + 797
>> 12 libvtkPVServerImplementationCore-pv5.0.1.dylib 0x0000000106e3e346
>> vtkSIProxy::CreateVTKObjects(paraview_protobuf::Message*) + 2086
>> 13 libvtkPVServerImplementationCore-pv5.0.1.dylib 0x0000000106e3ce01
>> vtkSIProxy::Push(paraview_protobuf::Message*) + 33
>> 14 libvtkPVServerImplementationCore-pv5.0.1.dylib 0x0000000106e248ec
>> vtkPVSessionCore::PushStateInternal(paraview_protobuf::Message*) + 2220
>> 15 libvtkPVServerImplementationCore-pv5.0.1.dylib 0x0000000106e24ba6
>> vtkPVSessionCore::PushState(paraview_protobuf::Message*) + 262
>> 16 libvtkPVServerImplementationCore-pv5.0.1.dylib 0x0000000106e220f6
>> vtkPVSessionBase::PushState(paraview_protobuf::Message*) + 38
>> 17 libvtkPVServerManagerCore-pv5.0.1.dylib 0x0000000106d2630a
>> vtkSMSessionClient::PushState(paraview_protobuf::Message*) + 426
>> 18 libvtkPVServerManagerCore-pv5.0.1.dylib 0x0000000106d0040c
>> vtkSMProxy::CreateVTKObjects() + 1276
>> 19 libvtkPVServerManagerCore-pv5.0.1.dylib 0x0000000106d42aab
>> vtkSMSettingsProxy::CreateVTKObjects() + 27
>> 20 libvtkPVServerManagerCore-pv5.0.1.dylib 0x0000000106cffa61
>> vtkSMProxy::UpdateVTKObjects() + 33
>> 21 libvtkPVServerManagerCore-pv5.0.1.dylib 0x0000000106ceccc5
>> vtkSMParaViewPipelineController::PostInitializeProxy(vtkSMProxy*) + 517
>> 22 libvtkPVServerManagerRendering-pv5.0.1.dylib 0x0000000109e288b3
>> vtkSMParaViewPipelineControllerWithRendering::PostInitializeProxy(vtkSMProxy*)
>> + 51
>> 23 libvtkPVServerManagerCore-pv5.0.1.dylib 0x0000000106cec898
>> vtkSMParaViewPipelineController::UpdateSettingsProxies(vtkSMSession*) + 296
>> 24 libvtkPVServerManagerCore-pv5.0.1.dylib 0x0000000106ce9d74
>> vtkSMParaViewPipelineController::InitializeSession(vtkSMSession*) + 452
>> 25 libvtkpqCore-pv5.0.1.dylib 0x0000000106688e5c
>> pqServerManagerModel::onConnectionCreated(long long) + 636
>>
>> On the server, I get
>>
>> ERROR: In
>> /Users/cory.quammen/src/ParaView-v5.0.0-RC2-source/VTK/Parallel/Core/vtkSocketCommunicator.cxx,
>> line 809
>>
>> vtkSocketCommunicator (0x7fbc2a4e8930): Could not receive tag. 1
>>
>> I'll check around to see what might be up with the source code packaging.
>>
>> Thanks for the report,
>> Cory
>>
>> On Fri, Dec 18, 2015 at 10:00 AM, Albina, Frank <
>> frank.albina at sauber-motorsport.com> wrote:
>>
>>> Hi Cory!
>>>
>>> Thank you very much for that.
>>>
>>> As said earlier in another post, I am very keen to see PV v5.0.0 release
>>> so I am happy to help and report issues before the new version gets
>>> unleashed.
>>>
>>> Cheers,
>>>
>>> Frank.
>>>
>>> *From:* Cory Quammen [mailto:cory.quammen at kitware.com]
>>> *Sent:* Freitag, 18. Dezember 2015 15:39
>>>
>>> *To:* Albina, Frank
>>> *Cc:* paraview at paraview.org
>>> *Subject:* Re: [Paraview] Paraview v5.0.0-rc2 with OpenGL2 backend
>>> failing to start in parallel
>>>
>>>
>>>
>>> Frank,
>>>
>>>
>>>
>>> Thanks for the info on where you got the code. Maybe there's a problem
>>> with the source packaging? I'll try out that download and see if I can
>>> reproduce the problem.
>>>
>>>
>>>
>>> Thanks,
>>>
>>> Cory
>>>
>>>
>>>
>>> On Fri, Dec 18, 2015 at 9:15 AM, Albina, Frank <
>>> frank.albina at sauber-motorsport.com> wrote:
>>>
>>> Hi Cory!
>>>
>>>
>>>
>>> I have compiled the source code from the Paraview v5.0.0-RC2 source
>>> files that I downloaded earlier this week from
>>> http://www.paraview.org/download/.
>>> No GIT repository there and none to be found in the top-level directory
>>> of the source files.
>>>
>>>
>>>
>>> Paraview client & server are from the same build, since I am starting
>>> both server and client from the same command line on the (Linux)
>>> workstation, hence I am using the same environement.
>>>
>>>
>>>
>>> HTH,
>>>
>>>
>>> Frank.
>>>
>>>
>>>
>>> *From:* Cory Quammen [mailto:cory.quammen at kitware.com]
>>> *Sent:* Freitag, 18. Dezember 2015 15:08
>>> *To:* Albina, Frank
>>> *Cc:* paraview at paraview.org
>>> *Subject:* Re: [Paraview] Paraview v5.0.0-rc2 with OpenGL2 backend
>>> failing to start in parallel
>>>
>>>
>>>
>>> Hi Frank,
>>>
>>>
>>>
>>> Since you said you recompiled ParaView, I suspect that maybe you forgot
>>> to update the submodules ParaView uses. In the ParaView source tree, run
>>>
>>>
>>>
>>> git status
>>>
>>>
>>>
>>> If VTK is listed, it may say there are new commits available for VTK. To
>>> update VTK, run
>>>
>>>
>>>
>>> git submodule update
>>>
>>>
>>>
>>> This has been an issue a few folks have encountered in the past.
>>>
>>>
>>>
>>> Also, double-check that your ParaView client and server are truly from
>>> the same build.
>>>
>>>
>>>
>>> HTH,
>>>
>>> Cory
>>>
>>>
>>>
>>> On Fri, Dec 18, 2015 at 8:30 AM, Albina, Frank <
>>> frank.albina at sauber-motorsport.com> wrote:
>>>
>>> Dear all!
>>>
>>>
>>>
>>> I recompiled Paraview-v5.0.0-rc2 from scratch using OpenMPI v1.6.5 and
>>> GCC v4.7.2 on my workstation.
>>>
>>> The QT & Python versions are the default system versions and are resp.
>>> 4.8.4 & 2.7.3.
>>>
>>>
>>>
>>> After successful compilation and installation, I start 8 parallel
>>> pvserver instances with:
>>>
>>> mpirun –np 8 pvserver –sp=7436
>>>
>>>
>>>
>>> Then, I start paraview and connect to the server running on the same
>>> machine. After connection is established, paraview fails with a
>>> segmentation fault.
>>>
>>>
>>>
>>> Waiting for client...
>>>
>>> Connection URL: cs://ws334:7436
>>>
>>> Accepting connection(s): ws334:7436
>>>
>>> Client connected.
>>>
>>> ERROR: In
>>> /cfdcode/opensuse12/opt/ParaView/SRC/paraview-5.0.0-rc2/VTK/Parallel/Core/vtkSocketCommunicator.cxx,
>>> line 809
>>>
>>> vtkSocketCommunicator (0x2b7a600): Could not receive tag. 1
>>>
>>>
>>>
>>> ERROR: In
>>> /cfdcode/opensuse12/opt/ParaView/SRC/paraview-5.0.0-rc2/VTK/Common/System/vtkSocket.cxx,
>>> line 572
>>>
>>> vtkClientSocket (0x293e940): Socket error in call to send. Broken pipe.
>>>
>>>
>>>
>>> ERROR: In
>>> /cfdcode/opensuse12/opt/ParaView/SRC/paraview-5.0.0-rc2/VTK/Common/System/vtkSocket.cxx,
>>> line 572
>>>
>>> vtkClientSocket (0x293e940): Socket error in call to send. Broken pipe.
>>>
>>>
>>>
>>> ERROR: In
>>> /cfdcode/opensuse12/opt/ParaView/SRC/paraview-5.0.0-rc2/VTK/Common/System/vtkSocket.cxx,
>>> line 572
>>>
>>> vtkClientSocket (0x293e940): Socket error in call to send. Broken pipe.
>>>
>>>
>>>
>>> ERROR: In
>>> /cfdcode/opensuse12/opt/ParaView/SRC/paraview-5.0.0-rc2/VTK/Common/System/vtkSocket.cxx,
>>> line 572
>>>
>>> vtkClientSocket (0x293e940): Socket error in call to send. Broken pipe.
>>>
>>>
>>>
>>> ERROR: In
>>> /cfdcode/opensuse12/opt/ParaView/SRC/paraview-5.0.0-rc2/VTK/Common/System/vtkSocket.cxx,
>>> line 572
>>>
>>> vtkClientSocket (0x293e940): Socket error in call to send. Broken pipe.
>>>
>>> […]
>>>
>>> ERROR: In
>>> /cfdcode/opensuse12/opt/ParaView/SRC/paraview-5.0.0-rc2/VTK/Common/System/vtkSocket.cxx,
>>> line 572
>>>
>>> vtkClientSocket (0x293e940): Socket error in call to send. Broken pipe.
>>>
>>>
>>>
>>> ERROR: In
>>> /cfdcode/opensuse12/opt/ParaView/SRC/paraview-5.0.0-rc2/VTK/Common/System/vtkSocket.cxx,
>>> line 572
>>>
>>> vtkClientSocket (0x293e940): Socket error in call to send. Broken pipe.
>>>
>>>
>>>
>>>
>>> --------------------------------------------------------------------------
>>>
>>> mpirun noticed that process rank 0 with PID 13964 on node ws334 exited
>>> on signal 11 (Segmentation fault).
>>>
>>>
>>> --------------------------------------------------------------------------
>>>
>>>
>>>
>>> I have included hereafter how Paraview was compiled:
>>>
>>> cmake $sourceDir \
>>>
>>> -DBUILD_SHARED_LIBS:BOOL=ON\
>>>
>>> -DBUILD_TESTING:BOOL=OFF\
>>>
>>> -DBUILD_DOCUMENTATION:BOOL=ON\
>>>
>>> -DCMAKE_BUILD_TYPE:STRING=Release\
>>>
>>> -DPARAVIEW_ENABLE_CATALYST:BOOL=ON\
>>>
>>> -DPARAVIEW_ENABLE_VTK_MODULES_AS_NEEDED:BOOL=TRUE\
>>>
>>> -DPARAVIEW_USE_MPI:BOOL=ON\
>>>
>>> -DPARAVIEW_USE_UNIFIED_BINDINGS:BOOL=ON\
>>>
>>> -DPARAVIEW_ENABLE_WEB:BOOL=ON\
>>>
>>> -DVTK_OPENGL_HAS_OSMESA:BOOL=OFF\
>>>
>>> -DPARAVIEW_BUILD_PLUGIN_SurfaceLIC:BOOL=TRUE\
>>>
>>> -DPARAVIEW_ENABLE_VTK_MODULES_AS_NEEDED:BOOL=TRUE\
>>>
>>> -DVTK_USE_OFFSCREEN:BOOL=OFF\
>>>
>>> -DVTK_USE_X:BOOL=ON\
>>>
>>> -DVTK_USE_QT=ON\
>>>
>>> -DVTK_USE_DISPLAY=ON\
>>>
>>> -DVTK_USE_GUI_SUPPORT:BOOL=ON\
>>>
>>> -DPARAVIEW_BUILD_QT_GUI:BOOL=ON\
>>>
>>> -DCMAKE_INSTALL_PREFIX:PATH=$installDir\
>>>
>>> -DPARAVIEW_ENABLE_PYTHON:BOOL=ON\
>>>
>>> -DPYTHON_ENABLE_MODULE_MPIPython:BOOL=ON\
>>>
>>> -DQT_QMAKE_EXECUTABLE:FILEPATH=/usr/bin/qmake\
>>>
>>> -DPYTHON_EXECUTABLE:FILEPATH=/usr/bin/python2\
>>>
>>> -DPYTHON_INCLUDE_DIR:FILEPATH=/usr/include/python2.7\
>>>
>>> -DPYTHON_LIBRARY:FILEPATH=/usr/lib64/libpython2.7.so\
>>>
>>> -DPYTHON_UTIL_LIBRARY:FILEPATH=/usr/lib64/libutil.so\
>>>
>>> -DVTK_RENDERING_BACKEND:STRING=OpenGL2\
>>>
>>> -DModule_vtkRenderingLICOpenGL2:BOOL=ON
>>>
>>>
>>>
>>> I must have missed something since I guess that Paraview using parallel
>>> servers should run, even when there is only one GPU available. Any hints
>>> would be greatly appreciated.
>>>
>>>
>>>
>>> Best regards,
>>>
>>>
>>>
>>> *Frank Albina *
>>>
>>>
>>> _______________________________________________
>>> Powered by www.kitware.com
>>>
>>> Visit other Kitware open-source projects at
>>> http://www.kitware.com/opensource/opensource.html
>>>
>>> Please keep messages on-topic and check the ParaView Wiki at:
>>> http://paraview.org/Wiki/ParaView
>>>
>>> Search the list archives at: http://markmail.org/search/?q=ParaView
>>>
>>> Follow this link to subscribe/unsubscribe:
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>>>
>>>
>>>
>>>
>>>
>>> --
>>>
>>> Cory Quammen
>>> R&D Engineer
>>> Kitware, Inc.
>>>
>>>
>>>
>>>
>>>
>>> --
>>>
>>> Cory Quammen
>>> R&D Engineer
>>> Kitware, Inc.
>>>
>>
>>
>>
>> --
>> Cory Quammen
>> R&D Engineer
>> Kitware, Inc.
>>
>
>
>
> --
> Cory Quammen
> R&D Engineer
> Kitware, Inc.
>
--
Cory Quammen
R&D Engineer
Kitware, Inc.
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