[Paraview] compile error paraview 3.10 with libvtkhdf5

[Aurélien Marsan]

Maybe I'm completely out of context.... but maybe not :
Are you trying to build with multiple tasks ? I mean do you use : "make -j"
?

I can't remember perfectly, but it seems to me that I had something wrong,
maybe with hdf5, when using make -j ... (building on windows using
msys-mingw)

2011/2/3 Eelco van Vliet <eelcovv at gmail.com>

> Unfortunately this does noet work, I got all kind of error message that it
> can not find HDF include directory etc. Since I am not administrator I can
> not install it in the default directories. I tried to compile the hdf lib
> myself, but this didn't work as well. Beside, hdf is delivered by the
> distribution right ?
> Well, if there is any other suggesting ?  I am now trying with
> VTK_USE_SYSTEM_HDF5 = 0 again
>
> The error message I got now ]
>   1%] Built target H5make_libsettings
>
> Linking C shared library ../../../../bin/libvtkhdf5.so
> CMakeFiles/vtkhdf5.dir/H5checksum.c.o: In function `gnu_dev_major':
> /usr/include/sys/sysmacros.h:43: multiple definition of `gnu_dev_major'
> CMakeFiles/vtkhdf5.dir/H5.c.o:/usr/include/sys/sysmacros.h:43: first
> defined here
> CMakeFiles/vtkhdf5.dir/H5checksum.c.o: In function `gnu_dev_minor':
> /usr/include/sys/sysmacros.h:49: multiple definition of `gnu_dev_minor'
> CMakeFiles/vtkhdf5.dir/H5.c.o:/usr/include/sys/sysmacros.h:49: first
> defined here
> CMakeFiles/vtkhdf5.dir/H5checksum.c.o: In function `gnu_dev_makedev':
> /usr/include/sys/sysmacros.h:55: multiple definition of `gnu_dev_makedev'
> CMakeFiles/vtkhdf5.dir/H5.c.o:/usr/include/sys/sysmacros.h:55: first
> defined here
> CMakeFiles/vtkhdf5.dir/H5checksum.c.o: In function `stat':
>  etc
> CMakeFiles/vtkhdf5.dir/__/H5Tinit.c.o: In function `mknod':
> /usr/include/sys/stat.h:465: multiple definition of `mknod'
> CMakeFiles/vtkhdf5.dir/H5.c.o:/usr/include/sys/stat.h:465: first defined
> here
> collect2: ld returned 1 exit status
> make[2]: *** [bin/libvtkhdf5.so.1.8.5] Error 1
> make[1]: *** [VTK/Utilities/vtkhdf5/src/CMakeFiles/vtkhdf5.dir/all] Error 2
> make: *** [all] Error 2
>
>
>
> Regards
> Eelco
>
>
>
> On Thu, Feb 3, 2011 at 4:28 PM, David Partyka <david.partyka at kitware.com>wrote:
>
>> Sorry yes, libhdf5 is what you can try with VTK_USE_SYSTEM_HDF5.
>>
>>
>> On Thu, Feb 3, 2011 at 10:07 AM, Eelco van Vliet <eelcovv at gmail.com>wrote:
>>
>>> Mmm,
>>>
>>> I can't find libvtkhdf, but only
>>>
>>> /usr/lib64/libhdf5.so.6.0.1
>>>
>>> Is this the same ?
>>>
>>>
>>>
>>> On Thu, Feb 3, 2011 at 4:04 PM, Eelco van Vliet <eelcovv at gmail.com>wrote:
>>>
>>>> Hi David,
>>>>
>>>> Distro: Scientific Linux SL release 5.2 (Boron) 64-bit version
>>>> GCC: gcc (OpenFOAM) 4.3.3
>>>>
>>>> I don't know where I can find libvtkhdf. Should I build it myself. Where
>>>> can I get it ?
>>>>
>>>> Regards,
>>>>
>>>> Eelco
>>>>
>>>>
>>>> On Thu, Feb 3, 2011 at 2:53 PM, David Partyka <
>>>> david.partyka at kitware.com> wrote:
>>>>
>>>>> That is strange, can you tell us what distro/gcc version you're using?
>>>>> You can't turn hdf5 off but you could install your distros hdf5/build it
>>>>> yourself and then turn on VTK_USE_SYSTEM_HDF5.
>>>>>
>>>>>   On Thu, Feb 3, 2011 at 8:41 AM, Eelco van Vliet <eelcovv at gmail.com>wrote:
>>>>>
>>>>>>  Dear all.
>>>>>>
>>>>>> I have been trying to compile the new 3.10 paraview source under my
>>>>>> linux system, but got the following complaint:
>>>>>>
>>>>>> Linking C shared library ../../../../bin/libvtkhdf5.so
>>>>>> CMakeFiles/vtkhdf5.dir/H5checksum.c.o: In function `gnu_dev_major':
>>>>>>
>>>>>> And from there many more errors related to the libvtkhdf5 library. Any
>>>>>> other people who have experienced this error ? Do I need hdf5? Can I switch
>>>>>> it off ?
>>>>>> Any hints appreciated.
>>>>>>
>>>>>> Regards,
>>>>>>
>>>>>> Eelco
>>>>>>
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>>>>>
>>>>
>>>
>>
>
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