[Paraview] openmpi 1.4 error paraview?

Pratik Mallya pratik.mallya at gmail.com
Tue Apr 19 09:21:36 EDT 2011


David Partyka wrote:
> What do you have MPI_LIBRAY and MPI_EXTRA_LIBRARY set to?
>
> On my Windows system that uses OpenMPI is have MPI_LIBRARY set to:
>
> C:/Kitware/ParaView 3.10/build-x64/OpenMPI-install/lib/libmpi.lib
>
> And MPI_EXTRA_LIBRARY set to:
>
> C:/Kitware/ParaView 3.10/build-x64/OpenMPI-install/lib/libmpi_cxx.lib
>
> On Tue, Apr 19, 2011 at 7:42 AM, Pratik Mallya 
> <pratik.mallya at gmail.com <mailto:pratik.mallya at gmail.com>> wrote:
>
>     Hello,
>     I built praview 3.10 successfully with openmpi 1.4 on my laptop.
>     However, when i tried to do the same thing on a cluster, i get the
>     following error:
>     [ 36%] Built target TestCxxFeatures
>     [ 36%] Built target TestInstantiator
>     [ 36%] Built target FilteringCxxTests
>     Linking CXX executable ../../../../bin/GraphicsCxxTests
>     ../../../../bin/libvtkParallel.so.pv3.10: undefined reference to
>     `MPI::Is_initialized()'
>     ../../../../bin/libvtkParallel.so.pv3.10: undefined reference to
>     `op_intercept(void*, void*, int*, unsigned int*)'
>     ../../../../bin/libvtkParallel.so.pv3.10: undefined reference to
>     `mpi_sgi_status_ignore'
>     ../../../../bin/libvtkParallel.so.pv3.10: undefined reference to
>     `PMPI::Comm::mpi_comm_map'
>     ../../../../bin/libvtkParallel.so.pv3.10: undefined reference to
>     `PMPI::Comm::ignored_status'
>     ../../../../bin/libvtkParallel.so.pv3.10: undefined reference to
>     `PMPI::Intracomm::current_op'
>     ../../../../bin/libvtkParallel.so.pv3.10: undefined reference to
>     `PMPI::Request::ignored_status'
>     collect2: ld returned 1 exit status
>     make[2]: *** [bin/GraphicsCxxTests] Error 1
>     make[1]: ***
>     [VTK/Graphics/Testing/Cxx/CMakeFiles/GraphicsCxxTests.dir/all] Error 2
>     make: *** [all] Error 2
>
>     Can anyone please  tell me what is causing this? I installed
>     openmpi 1.4 and used ccmake to point to it, so that shouldn't be
>     the problem, but it does look suspiciously like it .
>     Also, i disabled use_python, as it was giving some errors with
>     mpic++.... trying to figure that out too..
>     -- 
>     *Pratik Mallya*
>     http://en.wikipedia.org/wiki/User:Pratik.mallya
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>
I think I just may have found the error...the mpiexec was pointing to 
the intel mpi one (installed on cluster) rather than the openmpi that i 
built....will build and tell whether it works!

-- 
*Pratik Mallya*
http://en.wikipedia.org/wiki/User:Pratik.mallya


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