[Paraview] Re: Intel Compiler on OSX and High end SGI visualisation

[Mike Jackson]

So I did the trick described and now I am getting:

ld: Undefined symbols:
__intel_fast_memcmp
__intel_fast_memcpy
___libm_sse2_atan
___libm_sse2_cos
___libm_sse2_log10
___libm_sse2_atan2
___libm_sse2_sincos
___libm_sse2_sin

I am guessing that I am missing a library path somewhere but Not sure where.
Google isn't being helpful. I just found some references to libirc.a and
libimf.a.

Any help would be appreciated.

Here is my cmake instantiation:
cmake -D CMAKE_C_COMPILER:FILEPATH=/usr/bin/icc -D
CMAKE_CXX_COMPILER:FILEPATH=/usr/bin/icc -D
CXX_COMPILER_OPTIONS:STRING=-cxxlib-icc,-dynamiclib,-L/opt/intel/cc/9.1.030/
lib/,-lirc,-limf,lsvml -D CMAKE_VERBOSE_MAKEFILE:BOOL=ON ../paraview-2.4.4/


Mike Jackson

On 9/7/06 12:19 PM, "Dan White" <dan at chalkie.org.uk> wrote:

> Hi,
> 
> Yes that trick works for me also for building VTK wit intel compilers
> 
> Paul,
> I had a look at your facilities and see you have a modern SGI IRIX
> environment, with python and VTK.
> If you are using CVS version of VTK,
> and you also have wxPython and ffmpeg...
> (I only have an ancient indigo2)
> 
> It might be interesting to test the performance of our python VTK
> application
> for 3D rendering of volume data, BioImageXD on a high end SGI.
> Using VTK multithreading it will use multiple processors for volume
> rendering,
> so a modern SGI visualisation machine  might be a good performer....
> 
> see svn repos at
> svn co https://svn.sourceforge.net/svnroot/bioimagexd/bioimagexd/trunk
> 
> Its written in python, with a few extra VTK C++ classes that need to
> be compiled into
> a recent CVS version of VTK
> 
> Also general install instructions at
> http://modeling.bio.jyu.fi:8080/bioimagexd/Wiki/GettingStarted#UNIX
> 
> We are also trying to get it running on a SunOS big iron machine
> corona.csc.fi
> 
> We are aiming to support these kind of  big iron systems for
> visualisation
> and  processing of very large 3D microscopy time series data sets.
> Multiple processors and large memory are important for doing this
> efficiently.
> 
> I'd be interested to see if BioImageXD will work as is on a high end
> SGI system
> with python2.4 wxpython VTK5(CVS) and ffmpeg (it makes movies too)
> 
> maybe it might be a nice tool for you also... who knows
> 
> cheers
> 
> Dan
> 
> On 7 Sep 2006, at 19:00, paraview-request at paraview.org wrote:
> 
>> 
>> Date: Thu, 7 Sep 2006 08:31:28 -0500
>> From: "Paul Adams" <paul.adams.jr at gmail.com>
>> Subject: Re: [Paraview] Intel Compiler on OS X
>> To: "Mike Jackson" <mike.jackson at imts.us>
>> Cc: "ParaView at paraview.org" <ParaView at paraview.org>
>> Message-ID:
>> <1e472b890609070631h5a521706o808b4505316658ac at mail.gmail.com>
>> Content-Type: text/plain; charset="iso-8859-1"
>> 
>> While I have not built Paraview for OS X, I did have to use an
>> alternate
>> compiler
>> on one of my Linux systems.  Like yours, it would reset the
>> compiler back to
>> default.
>> The way that I got around that was to use something like the
>> following:
>> 
>> % CC=/path/to/C/Compiler CXX=/path/to/C++/Compiler ccmake ../
>> paraview-2.4.4
>> 
>> Obviously I removed my path from the above since it would be of no
>> help to
>> you.
>> Just replace the above pseudo path with the appropriate one for you.
>> 
>> Paul Adams
>> Scientific Visualization Lead
>> ERDC MSRC - Vicksburg, MS
>> 
>> On 9/7/06, Mike Jackson <mike.jackson at imts.us> wrote:
>>> 
>>> So I was lucky and was able to purchase the Intel C++ compiler for
>>> OS X. I
>>> am now trying to use it to compile paraview and having a small
>>> problem.
>>> 
>>> When I run ccmake ../paraview  and set the CMAKE_CXX_COMPILER then
>>> hit the
>>> "c" key to configure the "CMAKE_CXX_COMPILER" goes back to /usr/
>>> bin/c++
>>> 
>>> So am I doing something wrong here?
>>> 
>>> If I get this going I would like to attempt Paraview 2.9 with QT
>>> and start
>>> putting in DART reports against the intel compiler.
>>> 
>>> Thanks
>>> --
>>> Mike Jackson   Senior Research Engineer
>>> Innovative Management & Technology Services
>>> 
> 
> Dr. Daniel James White BSc. (Hons.) PhD
> Bioimaging Coordinator
> Nanoscience Centre and Department of Biological and Environmental
> Sciences
> Division of Molecular Recognition
> Ambiotica C242
> PO Box 35
> University of Jyväskylä
> Jyväskylä
> FIN 40014
> Finland
> 
> +358 14 260 4183 (work)
> +358 468102840 (mobile)
> http://www.bioimagexd.org
> http://www.chalkie.org.uk
> dan at chalkie.org.uk
> white at cc.jyu.fi
> 
>