[Paraview-developers] paraview superbuild

[Paul Edwards]

That fails here now:

....
/users/zephyr01/paul/dev/src/iconCFD-dev/ThirdParty/build/openmpi-1.6.4/ParaViewSuperbuild_build/hdf5/src/hdf5/hl/src/H5LT.c:873:44:
warning: (near initialization for ‘callbacks’) [enabled by default]
/users/zephyr01/paul/dev/src/iconCFD-dev/ThirdParty/build/openmpi-1.6.4/ParaViewSuperbuild_build/hdf5/src/hdf5/hl/src/H5LT.c:920:18:
error: request for member ‘udata’ in something not a structure or
union
/users/zephyr01/paul/dev/src/iconCFD-dev/ThirdParty/build/openmpi-1.6.4/ParaViewSuperbuild_build/hdf5/src/hdf5/hl/src/H5LT.c:923:9:
warning: implicit declaration of function
‘H5Pset_file_image_callbacks’ [-Wimplicit-function-declaration]
/users/zephyr01/paul/dev/src/iconCFD-dev/ThirdParty/build/openmpi-1.6.4/ParaViewSuperbuild_build/hdf5/src/hdf5/hl/src/H5LT.c:930:5:
warning: implicit declaration of function ‘H5Pset_file_image’
[-Wimplicit-function-declaration]
gmake[5]: *** [hl/src/CMakeFiles/hdf5_hl.dir/H5LT.c.o] Error 1
gmake[5]: *** Waiting for unfinished jobs....
gmake[4]: *** [hl/src/CMakeFiles/hdf5_hl.dir/all] Error 2
gmake[3]: *** [all] Error 2
CMake Error at /users/zephyr01/paul/dev/src/iconCFD-dev/ThirdParty/build/openmpi-1.6.4/ParaViewSuperbuild_build/pv-hdf5-build.cmake:26
(message):
  Failed!!!

Regards,
Paul

On 1 July 2013 16:14, Utkarsh Ayachit <utkarsh.ayachit at kitware.com> wrote:
> Can you try turning on HDF5 from the Superbuild as well?
>
> On Mon, Jul 1, 2013 at 11:05 AM, Paul Edwards <paul.m.edwards at gmail.com> wrote:
>> Hi Utkarsh,
>>
>> Rerunning the build in serial gives this:
>>
>> 8<-------------------------------------------------------------------------
>> ...
>> ...
>> Scanning dependencies of target vtkWrappingPythonCore
>> [  6%] Building CXX object
>> VTK/Utilities/PythonInterpreter/CMakeFiles/vtkPythonInterpreter.dir/vtkPythonInterpreter.cxx.o
>> [  6%] Scanning dependencies of target vtkCommonSystem
>> Building CXX object
>> VTK/Wrapping/PythonCore/CMakeFiles/vtkWrappingPythonCore.dir/vtkPythonArgs.cxx.o
>> [  6%] Scanning dependencies of target vtkCommonMath
>> Building CXX object
>> VTK/Common/System/CMakeFiles/vtkCommonSystem.dir/vtkClientSocket.cxx.o
>> [  6%] Building CXX object
>> VTK/Common/Math/CMakeFiles/vtkCommonMath.dir/vtkAmoebaMinimizer.cxx.o
>> [  6%] Building C object
>> VTK/ThirdParty/hdf5/vtkhdf5/src/CMakeFiles/vtkhdf5.dir/H5FDlog.c.o
>> /users/zephyr01/paul/dev/src/iconCFD-dev/ThirdParty/build/openmpi-1.6.4/ParaViewSuperbuild_build/paraview/src/paraview/VTK/ThirdParty/hdf5/vtkhdf5/src/H5FDlog.c:212:5:
>> error: ‘off64_t’ undeclared here (not in a function)
>> /users/zephyr01/paul/dev/src/iconCFD-dev/ThirdParty/build/openmpi-1.6.4/ParaViewSuperbuild_build/paraview/src/paraview/VTK/ThirdParty/hdf5/vtkhdf5/src/H5FDlog.c:
>> In function ‘H5FD_log_read’:
>> /users/zephyr01/paul/dev/src/iconCFD-dev/ThirdParty/build/openmpi-1.6.4/ParaViewSuperbuild_build/paraview/src/paraview/VTK/ThirdParty/hdf5/vtkhdf5/src/H5FDlog.c:1089:48:
>> error: expected ‘)’ before ‘addr’
>> /users/zephyr01/paul/dev/src/iconCFD-dev/ThirdParty/build/openmpi-1.6.4/ParaViewSuperbuild_build/paraview/src/paraview/VTK/ThirdParty/hdf5/vtkhdf5/src/H5FDlog.c:
>> In function ‘H5FD_log_write’:
>> /users/zephyr01/paul/dev/src/iconCFD-dev/ThirdParty/build/openmpi-1.6.4/ParaViewSuperbuild_build/paraview/src/paraview/VTK/ThirdParty/hdf5/vtkhdf5/src/H5FDlog.c:1201:47:
>> error: expected ‘)’ before ‘addr’
>> gmake[5]: *** [VTK/ThirdParty/hdf5/vtkhdf5/src/CMakeFiles/vtkhdf5.dir/H5FDlog.c.o]
>> Error 1
>> gmake[4]: *** [VTK/ThirdParty/hdf5/vtkhdf5/src/CMakeFiles/vtkhdf5.dir/all]
>> Error 2
>> gmake[4]: *** Waiting for unfinished jobs....
>> ------------------------------------------------------------------------->8
>>
>> I think this must be a problem configuring something as this compiles
>> here when using the superbuild without Python...
>>
>> ...and, I can make it work with python when building the dependencies
>> myself (same versions) and then ParaView from source.
>>
>> I was hoping to make my life easier using the superbuild ;)
>>
>> Please let me know if you know what is going wrong.
>>
>> Thanks,
>> Paul
>>
>>
>>
>> On 1 July 2013 15:30, Utkarsh Ayachit <utkarsh.ayachit at kitware.com> wrote:
>>> Paul, are you doing a parallel build? Can you try without the "-j". It
>>> should atleast make the error message a bit easier to read.
>>>
>>> Utkarsh
>>>
>>> On Mon, Jul 1, 2013 at 10:18 AM, Paul Edwards <paul.m.edwards at gmail.com> wrote:
>>>> Hi,
>>>>
>>>> I'm trying to use the ParaViewSuperbuild (for v4.0.1) on suse 12.1 but
>>>> it is failing as soon as I try to include python.
>>>>
>>>> 8<---------------------------------------------------------------------
>>>> ...
>>>> [  5%] Generating ../H5lib_settings.c
>>>> libhdf5.settings: No such file or directory
>>>> gmake[5]: *** [VTK/ThirdParty/hdf5/vtkhdf5/H5lib_settings.c] Error 1
>>>> gmake[4]: *** [VTK/ThirdParty/hdf5/vtkhdf5/src/CMakeFiles/vtkhdf5.dir/all]
>>>> Error 2
>>>> gmake[4]: *** Waiting for unfinished jobs....
>>>> ...
>>>> ...
>>>> Linking C shared module ../../../lib/site-packages/mpi4py/MPI.so
>>>> [  5%] Built target mpi4py.MPI
>>>> gmake[3]: *** [all] Error 2
>>>> CMake Error at /users/zephyr01/paul/dev/src/iconCFD-dev/ThirdParty/build/openmpi-1.6.4/ParaViewSuperbuild_build/pv-paraview-build.cmake:26
>>>> (message):
>>>>   Failed!!!
>>>> --------------------------------------------------------------------->8
>>>>
>>>> I'm struggling to find out where the actual problem is here.  Any ideas?
>>>>
>>>> Thanks,
>>>> Paul
>>>> _______________________________________________
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