[Nirfast] Meet problems when using NIRFAST slicer

Alexis Girault alexis.girault at kitware.com
Wed Sep 28 10:24:37 EDT 2016

Hello Hong,

Thank you for reaching out about your issue. We'll investigate more on what
the NIRFAST-Slicer capabilities are related to 2D Images and we will keep
you posted.

I answered to you and attached NIRFAST mailing list, where users and
developers can communicate. You can subscribe to it at

If anybody else on this mailing list has encountered similar problems and
has feedbacks/solutions, your inputs are welcome!

Best regards,

Alexis Girault
R&D Engineer in Medical Computing
Kitware, Inc.

(919) 969-6990 x325

On Fri, Sep 23, 2016 at 5:47 AM, Hong Yang <cindyyanghong at gmail.com> wrote:

> Dear Mr. Girault,
> I am Hong Yang, a phd student from Technical university of Munich.
> I want to use the NIRFAST slicer to* simulate the light fluence model *within
> my sample. However the software did not work.
> *In my case, I only have one 2D image and the original data is saved with
> Matlab matrix. What I did is saving this matrix to an 'tif' image and load
> this tif image to the slicer.*
> *The following are my questions:*
> Can NIRFAST slicer work for single 2D image case?
> If yes,  I try to do image crop and segmentation with the slicer, it
> crashed down every time I tried to crop the image. And if I skip the crop
> step and go to do segmentation, the label does not work. How can I solve
> this?
> Thank you for your help.
> Best
> Hong
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