[Insight-users] 'itkDenseFrequencyContainer2.h': No such file or directory
Humayun Irshad
humayun.irshad at gmail.com
Mon Mar 19 23:36:22 EDT 2012
I am using InsightToolkit-3.20.0
Bill Lorensen-2 wrote:
>
> What version of ITK are you using?
>
> On Mon, Mar 19, 2012 at 2:51 AM, Humayun Irshad
> <humayun.irshad at gmail.com> wrote:
>>
>> When i compile this code (took from this link
>> http://www.cmake.org/Wiki/ITK/Examples/Statistics/TextureFeatures)
>> I also include ITKStatistics.lib or add ITKReview (../Code/Review/). I
>> found
>> this error message.
>>
>> 1>Compiling...
>> 1>TextureFeatures.cxx
>> 1>..\TextureFeatures.cxx(4) : fatal error C1083: Cannot open include
>> file:
>> 'itkDenseFrequencyContainer2.h': No such file or directory
>> 1>Build log was saved at
>> "file://h:\ITK\WS\GLCM\build\TextureFeatures.dir\Debug\BuildLog.htm"
>> 1>TextureFeatures - 1 error(s), 0 warning(s)
>> 2>------ Skipped Build: Project: ALL_BUILD, Configuration: Debug Win32
>> ------
>> 2>Project not selected to build for this solution configuration
>> ========== Build: 0 succeeded, 1 failed, 1 up-to-date, 1 skipped
>> ==========
>>
>> Can i anybody help me regarding this error.
>> #include "itkImage.h"
>> #include "itkImageFileReader.h"
>> #include "itkImageFileWriter.h"
>> #include <itkDenseFrequencyContainer2.h>
>> #include "itkHistogramToTextureFeaturesFilter.h"
>> #include "itkScalarImageToCooccurrenceMatrixFilter.h"
>> #include "itkVectorContainer.h"
>> #include "itkAddImageFilter.h"
>> #include "itkMultiplyImageFilter.h"
>> #include "itkRegionOfInterestImageFilter.h"
>>
>>
>> //definitions of used types
>> typedef itk::Image<float, 3> InternalImageType;
>> typedef itk::Image<unsigned char, 3> VisualizingImageType;
>> typedef itk::Neighborhood<float, 3> NeighborhoodType;
>> typedef
>> itk::Statistics::ScalarImageToCooccurrenceMatrixFilter<InternalImageType>
>> Image2CoOccuranceType;
>> typedef Image2CoOccuranceType::HistogramType HistogramType;
>> typedef itk::Statistics::HistogramToTextureFeaturesFilter<HistogramType>
>> Hist2FeaturesType;
>> typedef InternalImageType::OffsetType OffsetType;
>> typedef itk::AddImageFilter <InternalImageType> AddImageFilterType;
>> typedef itk::MultiplyImageFilter<InternalImageType>
>> MultiplyImageFilterType;
>>
>> //calculate features for one offset
>> void calcTextureFeatureImage (OffsetType offset,
>> InternalImageType::Pointer inputImage, InternalImageType::Pointer
>> outInertia,
>> InternalImageType::Pointer outCorrelation, InternalImageType::Pointer
>> outEnergy)
>> {
>> //allocate output images
>> outInertia->CopyInformation(inputImage);
>> outInertia->SetRegions(inputImage->GetLargestPossibleRegion());
>> outInertia->Allocate();
>> outInertia->FillBuffer(0);
>> outCorrelation->CopyInformation(inputImage);
>> outCorrelation->SetRegions(inputImage->GetLargestPossibleRegion());
>> outCorrelation->Allocate();
>> outCorrelation->FillBuffer(0);
>> outEnergy->CopyInformation(inputImage);
>> outEnergy->SetRegions(inputImage->GetLargestPossibleRegion());
>> outEnergy->Allocate();
>> outEnergy->FillBuffer(0);
>>
>> Image2CoOccuranceType::Pointer
>> glcmGenerator=Image2CoOccuranceType::New();
>> glcmGenerator->SetOffset(offset);
>> glcmGenerator->SetNumberOfBinsPerAxis(16); //reasonable number of bins
>> glcmGenerator->SetPixelValueMinMax(0, 255); //for input UCHAR pixel
>> type
>> Hist2FeaturesType::Pointer featureCalc=Hist2FeaturesType::New();
>>
>> typedef
>> itk::RegionOfInterestImageFilter<InternalImageType,InternalImageType>
>> roiType;
>> roiType::Pointer roi=roiType::New();
>> roi->SetInput(inputImage);
>>
>> InternalImageType::RegionType window;
>> InternalImageType::RegionType::SizeType size;
>> size.Fill(3); //window size=3x3x3
>> window.SetSize(size);
>> InternalImageType::IndexType pi; //pixel index
>>
>> //slide window over the entire image
>> for (unsigned x=1;
>> x<inputImage->GetLargestPossibleRegion().GetSize(0)-1; x++)
>> {
>> pi.SetElement(0,x);
>> window.SetIndex(0,x-1);
>> for (unsigned y=1;
>> y<inputImage->GetLargestPossibleRegion().GetSize(1)-1; y++)
>> {
>> pi.SetElement(1,y);
>> window.SetIndex(1,y-1);
>> for (unsigned z=1;
>> z<inputImage->GetLargestPossibleRegion().GetSize(2)-1; z++)
>> {
>> pi.SetElement(2,z);
>> window.SetIndex(2,z-1);
>> roi->SetRegionOfInterest(window);
>> roi->Update();
>> glcmGenerator->SetInput(roi->GetOutput());
>> glcmGenerator->Update();
>> featureCalc->SetInput( glcmGenerator->GetOutput() );
>> featureCalc->Update();
>>
>> outInertia->SetPixel(pi,
>> featureCalc->GetFeature(Hist2FeaturesType::Inertia));
>> outCorrelation->SetPixel(pi,
>> featureCalc->GetFeature(Hist2FeaturesType::Correlation));
>> outEnergy->SetPixel(pi,
>> featureCalc->GetFeature(Hist2FeaturesType::Energy));
>> }
>> }
>> std::cout<<'.';
>> }
>> }
>>
>> int main(int, char *[])
>> {
>> typedef itk::ImageFileReader<InternalImageType> ReaderType;
>> ReaderType::Pointer reader=ReaderType::New();
>> reader->SetFileName("t64.mha");
>> //http://www.cg.informatik.uni-siegen.de/data/Downloads/t64.mha
>> reader->Update();
>> InternalImageType::Pointer image=reader->GetOutput();
>>
>> NeighborhoodType neighborhood;
>> neighborhood.SetRadius(1);
>> unsigned int centerIndex = neighborhood.GetCenterNeighborhoodIndex();
>> OffsetType offset;
>>
>> typedef itk::ImageFileWriter<InternalImageType> WriterType;
>> WriterType::Pointer writer=WriterType::New();
>> char buf[64];
>>
>> for ( unsigned int d = 0; d < centerIndex; d++ )
>> {
>> offset = neighborhood.GetOffset(d);
>> InternalImageType::Pointer inertia=InternalImageType::New();
>> InternalImageType::Pointer correlation=InternalImageType::New();
>> InternalImageType::Pointer energy=InternalImageType::New();
>> calcTextureFeatureImage(offset, image, inertia, correlation,
>> energy);
>>
>> writer->SetInput(inertia);
>> std::stringstream fileNameWithExt;
>> fileNameWithExt << "Inertia" << d << ".mha";
>> std::string fileName(fileNameWithExt.str());
>> writer->SetFileName(fileName.c_str());
>> writer->Update();
>> writer->SetInput(correlation);
>> std::stringstream fileNameWithExt2;
>> fileNameWithExt2 << "Correlation" << d << ".mha";
>> std::string fileName2(fileNameWithExt2.str());
>> writer->SetFileName(fileName2.c_str());
>> writer->SetFileName(buf);
>> writer->Update();
>> writer->SetInput(energy);
>> std::stringstream fileNameWithExt3;
>> fileNameWithExt3 << "Energy" << d << ".mha";
>> std::string fileName3(fileNameWithExt3.str());
>> writer->SetFileName(fileName3.c_str());
>> writer->SetFileName(buf);
>> writer->Update();
>> std::cout<<'\n';
>> }
>>
>> return EXIT_SUCCESS;
>> }
>> --
>> View this message in context:
>> http://old.nabble.com/%27itkDenseFrequencyContainer2.h%27%3A-No-such-file-or-directory-tp33530148p33530148.html
>> Sent from the ITK - Users mailing list archive at Nabble.com.
>>
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>
>
> --
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> Visit other Kitware open-source projects at
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> Kitware offers ITK Training Courses, for more information visit:
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>
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