[Insight-users] 'itkDenseFrequencyContainer2.h': No such file or directory

[Bill Lorensen]

What version of ITK are you using?

On Mon, Mar 19, 2012 at 2:51 AM, Humayun Irshad
<humayun.irshad at gmail.com> wrote:
>
> When i compile this code (took from this link
> http://www.cmake.org/Wiki/ITK/Examples/Statistics/TextureFeatures)
> I also include ITKStatistics.lib or add ITKReview (../Code/Review/). I found
> this error message.
>
> 1>Compiling...
> 1>TextureFeatures.cxx
> 1>..\TextureFeatures.cxx(4) : fatal error C1083: Cannot open include file:
> 'itkDenseFrequencyContainer2.h': No such file or directory
> 1>Build log was saved at
> "file://h:\ITK\WS\GLCM\build\TextureFeatures.dir\Debug\BuildLog.htm"
> 1>TextureFeatures - 1 error(s), 0 warning(s)
> 2>------ Skipped Build: Project: ALL_BUILD, Configuration: Debug Win32
> ------
> 2>Project not selected to build for this solution configuration
> ========== Build: 0 succeeded, 1 failed, 1 up-to-date, 1 skipped ==========
>
> Can i anybody help me regarding this error.
> #include "itkImage.h"
> #include "itkImageFileReader.h"
> #include "itkImageFileWriter.h"
> #include <itkDenseFrequencyContainer2.h>
> #include "itkHistogramToTextureFeaturesFilter.h"
> #include "itkScalarImageToCooccurrenceMatrixFilter.h"
> #include "itkVectorContainer.h"
> #include "itkAddImageFilter.h"
> #include "itkMultiplyImageFilter.h"
> #include "itkRegionOfInterestImageFilter.h"
>
>
> //definitions of used types
> typedef itk::Image<float, 3> InternalImageType;
> typedef itk::Image<unsigned char, 3> VisualizingImageType;
> typedef itk::Neighborhood<float, 3> NeighborhoodType;
> typedef
> itk::Statistics::ScalarImageToCooccurrenceMatrixFilter<InternalImageType>
>    Image2CoOccuranceType;
> typedef Image2CoOccuranceType::HistogramType HistogramType;
> typedef itk::Statistics::HistogramToTextureFeaturesFilter<HistogramType>
> Hist2FeaturesType;
> typedef InternalImageType::OffsetType OffsetType;
> typedef itk::AddImageFilter <InternalImageType> AddImageFilterType;
> typedef itk::MultiplyImageFilter<InternalImageType> MultiplyImageFilterType;
>
> //calculate features for one offset
> void calcTextureFeatureImage (OffsetType offset,
>    InternalImageType::Pointer inputImage, InternalImageType::Pointer
> outInertia,
>    InternalImageType::Pointer outCorrelation, InternalImageType::Pointer
> outEnergy)
> {
>    //allocate output images
>    outInertia->CopyInformation(inputImage);
>    outInertia->SetRegions(inputImage->GetLargestPossibleRegion());
>    outInertia->Allocate();
>    outInertia->FillBuffer(0);
>    outCorrelation->CopyInformation(inputImage);
>    outCorrelation->SetRegions(inputImage->GetLargestPossibleRegion());
>    outCorrelation->Allocate();
>    outCorrelation->FillBuffer(0);
>    outEnergy->CopyInformation(inputImage);
>    outEnergy->SetRegions(inputImage->GetLargestPossibleRegion());
>    outEnergy->Allocate();
>    outEnergy->FillBuffer(0);
>
>    Image2CoOccuranceType::Pointer
> glcmGenerator=Image2CoOccuranceType::New();
>    glcmGenerator->SetOffset(offset);
>    glcmGenerator->SetNumberOfBinsPerAxis(16); //reasonable number of bins
>    glcmGenerator->SetPixelValueMinMax(0, 255); //for input UCHAR pixel type
>    Hist2FeaturesType::Pointer featureCalc=Hist2FeaturesType::New();
>
>    typedef
> itk::RegionOfInterestImageFilter<InternalImageType,InternalImageType>
> roiType;
>    roiType::Pointer roi=roiType::New();
>    roi->SetInput(inputImage);
>
>    InternalImageType::RegionType window;
>    InternalImageType::RegionType::SizeType size;
>    size.Fill(3); //window size=3x3x3
>    window.SetSize(size);
>    InternalImageType::IndexType pi; //pixel index
>
>    //slide window over the entire image
>    for (unsigned x=1;
> x<inputImage->GetLargestPossibleRegion().GetSize(0)-1; x++)
>    {
>        pi.SetElement(0,x);
>        window.SetIndex(0,x-1);
>        for (unsigned y=1;
> y<inputImage->GetLargestPossibleRegion().GetSize(1)-1; y++)
>        {
>            pi.SetElement(1,y);
>            window.SetIndex(1,y-1);
>            for (unsigned z=1;
> z<inputImage->GetLargestPossibleRegion().GetSize(2)-1; z++)
>            {
>                pi.SetElement(2,z);
>                window.SetIndex(2,z-1);
>                roi->SetRegionOfInterest(window);
>                roi->Update();
>                glcmGenerator->SetInput(roi->GetOutput());
>                glcmGenerator->Update();
>                featureCalc->SetInput( glcmGenerator->GetOutput() );
>                featureCalc->Update();
>
>                outInertia->SetPixel(pi,
> featureCalc->GetFeature(Hist2FeaturesType::Inertia));
>                outCorrelation->SetPixel(pi,
> featureCalc->GetFeature(Hist2FeaturesType::Correlation));
>                outEnergy->SetPixel(pi,
> featureCalc->GetFeature(Hist2FeaturesType::Energy));
>            }
>        }
>        std::cout<<'.';
>    }
> }
>
> int main(int, char *[])
> {
>    typedef itk::ImageFileReader<InternalImageType> ReaderType;
>    ReaderType::Pointer reader=ReaderType::New();
>    reader->SetFileName("t64.mha");
> //http://www.cg.informatik.uni-siegen.de/data/Downloads/t64.mha
>    reader->Update();
>    InternalImageType::Pointer image=reader->GetOutput();
>
>    NeighborhoodType neighborhood;
>    neighborhood.SetRadius(1);
>    unsigned int centerIndex = neighborhood.GetCenterNeighborhoodIndex();
>    OffsetType offset;
>
>    typedef itk::ImageFileWriter<InternalImageType> WriterType;
>    WriterType::Pointer writer=WriterType::New();
>    char buf[64];
>
>    for ( unsigned int d = 0; d < centerIndex; d++ )
>    {
>        offset = neighborhood.GetOffset(d);
>        InternalImageType::Pointer inertia=InternalImageType::New();
>        InternalImageType::Pointer correlation=InternalImageType::New();
>        InternalImageType::Pointer energy=InternalImageType::New();
>        calcTextureFeatureImage(offset, image, inertia, correlation,
> energy);
>
>        writer->SetInput(inertia);
>                std::stringstream fileNameWithExt;
>                fileNameWithExt << "Inertia" << d << ".mha";
>                std::string fileName(fileNameWithExt.str());
>                writer->SetFileName(fileName.c_str());
>        writer->Update();
>        writer->SetInput(correlation);
>                std::stringstream fileNameWithExt2;
>                fileNameWithExt2 << "Correlation" << d << ".mha";
>                std::string fileName2(fileNameWithExt2.str());
>                writer->SetFileName(fileName2.c_str());
>            writer->SetFileName(buf);
>        writer->Update();
>        writer->SetInput(energy);
>                std::stringstream fileNameWithExt3;
>                fileNameWithExt3 << "Energy" << d << ".mha";
>                std::string fileName3(fileNameWithExt3.str());
>                writer->SetFileName(fileName3.c_str());
>        writer->SetFileName(buf);
>        writer->Update();
>        std::cout<<'\n';
>    }
>
>    return EXIT_SUCCESS;
> }
> --
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>
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