[Insight-users] Dicom and Image Spacing
Alexander Schmidt-Richberg
schmidt-richberg at imi.uni-luebeck.de
Thu Dec 6 04:16:55 EST 2012
Hi,
sorry if this has been discussed before. I'm sure I'm not the first to
realize, but I couldn't find anything in the mailing lists.
I have a problem with reading/writing volume images as Dicom files with
ITKv4, presumably due to the change from GDCM 1.x to 2.x.
In ITK 3, the image spacing was stored in the tags
"SpacingBetweenSlices" and "ImagerPixelSpacing". In v4,
"NominalScannedPixelSpacing" is used for the in-plane spacing, however,
the z-spacing is not stored at all (if I'm right). That means, all of
the "old" images I'm reading with ITK4 have a uniform spacing of 1,
since the old tags are not interpreted. Moreover, programs like MeVisLab
ignore the new tag.
Has this behavior been discussed? Is it working as intended and is there
any workaround?
Best regards Alex
--
Dipl. Medieninf. Alexander Schmidt-Richberg
Wissenschaftlicher Mitarbeiter
UNIVERSITÄT ZU LÜBECK
INSTITUT FÜR MEDIZINISCHE INFORMATIK
Ratzeburger Allee 160
23538 Lübeck
Tel +49 451 500 5645
Fax +49 451 500 5610
schmidt-richberg at imi.uni-luebeck.de
www.imi.uni-luebeck.de
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