[Insight-users] VNL 1.14 and ITK 3.20

[Bill Lorensen]

Sure, but I don't know how to do that...

On Thu, May 26, 2011 at 10:18 AM, Johnson, Hans J
<hans-johnson at uiowa.edu> wrote:
> Bill,
>
> Can we get your patch incorporated into ITKv3?
>
> Thanks,
> Hans
>
> --
> Hans J. Johnson, Ph.D.
> hans-johnson at uiowa.edu
> Assistant Professor of Psychiatry
> University of Iowa Carver College of Medicine
> W278 GH, 200 Hawkins Drive
>
> Iowa City, Iowa 52242
> Phone:  319-353-8587
>
>
>
>
>
>
>
> -----Original Message-----
> From: Estanislao Oubel <stan.oubel at gmail.com>
> Date: Thu, 26 May 2011 16:12:31 +0200
> To: Bill Lorensen <bill.lorensen at gmail.com>
> Cc: <insight-users at itk.org>
> Subject: Re: [Insight-users] VNL 1.14 and ITK 3.20
>
> yes it works ! thanks !
>
>
> Le 26/05/2011 14:22, Bill Lorensen a écrit :
>> Not in ITK3.20.
>>
>> Did my fix work?
>>
>> On Thu, May 26, 2011 at 4:03 AM, francois rousseau<rousseau at unistra.fr>
>>wrote:
>>
>>> Would it be possible to avoid the compilation of the FEM module ?
>>>
>>> françois
>>>
>>>
>>> On May 24, 2011, at 4:25 PM, Bill Lorensen wrote:
>>>
>>>
>>>> The VXL folks made a non backward-compatible change to their API. The
>>>> following change has been made in ITKv4, but not ITK3.20.
>>>>
>>>>
>>>> In itkFEMLinearSystemWrapperVNL.cxx
>>>> go to the error line and replace it with the following:
>>>>
>>>> #if VXL_VERSION_MAJOR == 1&&  VXL_VERSION_MINOR == 9
>>>> ((*m_Matrices)[LeftMatrixIndex])->mult(
>>>> *((*m_Matrices)[RightMatrixIndex]),
>>>> *((*m_Matrices)[ResultMatrixIndex]) );
>>>> #else
>>>> *((*m_Matrices)[ResultMatrixIndex]) =
>>>> *((*m_Matrices)[LeftMatrixIndex]) * (
>>>>*((*m_Matrices)[RightMatrixIndex]));
>>>> #endif
>>>>
>>>> On Tue, May 24, 2011 at 8:46 AM, Estanislao
>>>>Oubel<stan.oubel at gmail.com>  wrote:
>>>>
>>>>> Hi all,
>>>>>
>>>>> I'd like to use VNL 1.14 with ITK 3.20 because the vnl_sparse_matrix
>>>>> includes several
>>>>> useful methods absent in the VNL version included in ITK 3.20
>>>>> (sparse matrix multiplication for example)
>>>>>
>>>>> I've set ITK_USE_SYSTEM_VXL to ON but I get some compilation errors:
>>>>>
>>>>> [100%] [100%] [100%] Building CXX object
>>>>> Code/Numerics/FEM/CMakeFiles/ITKFEM.dir/itkFEMUtility.o
>>>>> Building CXX object
>>>>> Code/Numerics/FEM/CMakeFiles/ITKFEM.dir/itkFEMInitialization.o
>>>>> Building C object Code/Numerics/FEM/CMakeFiles/ITKFEM.dir/dsrc2c.o
>>>>> /home/miv/oubel/lib/vxl-1.14.0/core/vnl/vnl_sparse_matrix.h: In member
>>>>> function Œvirtual void
>>>>> itk::fem::LinearSystemWrapperVNL::MultiplyMatrixMatrix(unsigned int,
>>>>> unsigned int, unsigned int)¹:
>>>>> /home/miv/oubel/lib/vxl-1.14.0/core/vnl/vnl_sparse_matrix.h:268:
>>>>>error:
>>>>> Œvoid vnl_sparse_matrix<T>::mult(const vnl_sparse_matrix<T>&,
>>>>> vnl_sparse_matrix<T>&) const [with T = double]¹ is protected
>>>>>
>>>>>/home/miv/oubel/lib/InsightToolkit-3.20.0/Code/Numerics/FEM/itkFEMLinea
>>>>>rSystemWrapperVNL.cxx:265:
>>>>> error: within this context
>>>>> make[2]: ***
>>>>>
>>>>>[Code/Numerics/FEM/CMakeFiles/ITKFEM.dir/itkFEMLinearSystemWrapperVNL.o
>>>>>]
>>>>> Erreur 1
>>>>> make[2]: *** Attente des tâches non terminées....
>>>>> make[1]: *** [Code/Numerics/FEM/CMakeFiles/ITKFEM.dir/all] Erreur 2
>>>>> make[1]: *** Attente des tâches non terminées....
>>>>> Linking CXX shared library ../../bin/libITKIOReview.so
>>>>> [100%] Built target ITKIOReview
>>>>> Linking CXX executable ../../bin/itkTestDriver
>>>>> [100%] Built target itkTestDriver
>>>>> make: *** [all] Erreur 2
>>>>>
>>>>> Am I doing anything wrong? Have you found similar problems?
>>>>>
>>>>> Best
>>>>>
>>>>> stan
>>>>>
>>>>>
>>>>>
>>>>> _____________________________________
>>>>> Powered by www.kitware.com
>>>>>
>>>>> Visit other Kitware open-source projects at
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>>>>> http://www.kitware.com/products/protraining.html
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>>>>> Please keep messages on-topic and check the ITK FAQ at:
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>>>>>
>>>> _____________________________________
>>>> Powered by www.kitware.com
>>>>
>>>> Visit other Kitware open-source projects at
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>>>>
>>>> Kitware offers ITK Training Courses, for more information visit:
>>>> http://www.kitware.com/products/protraining.html
>>>>
>>>> Please keep messages on-topic and check the ITK FAQ at:
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>>>>
>>> --
>>> ---------------------------
>>> Francois Rousseau
>>> LSIIT
>>> Pôle API
>>> Boulevard Sébastien Brant
>>> F-67400 ILLKIRCH
>>> tel : +33 3 68 85 44 89
>>> email : rousseau at unistra.fr
>>> http://lsiit-miv.u-strasbg.fr/miv/19-ROUSSEAU-Francois.html
>>>
>>>
>>>
>
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