[Insight-users] mrc data format

Jeff Donner jeffrey.donner at gmail.com
Wed Oct 13 12:23:09 EDT 2010


I have code just about ready to go - I just need to rebase the patches
for the current build. I've been holding off because I've been
confused about the meaning of MRC's orientation, for non-orthogonal
(and maybe for any rotation at all) cases. I'm not a dev; perhaps I'll
post them to this list, for someone else to do the commits. If
anyone's in a hurry I can just post what I have, but otherwise I
estimate maybe 2 days.

On Wed, Oct 13, 2010 at 1:44 AM, Sergio Vera <sergio.vera at alma3d.com> wrote:
> Hi
> One of the improvements of the next version of ITK (v4) will be better
> support for microscopy images:
> http://www.itk.org/Wiki/ITK_Release_4/Microscopy
> however, I don't know the specific file formats that ITK will or will  not
> support.
> It may be a good idea to get in touch with some of the developers to give a
> hand and/or publish your code
> regards
> On Wed, Oct 13, 2010 at 6:38 AM, Mauro Maiorca <mauromaiorca at gmail.com>
> wrote:
>>
>> Hello all,
>>
>> I'm currently working with electron microscope images, and I found  ITK
>> and related applications (i.e. itk-snap) very useful.
>> Unfortunately, it seems to me that ITK doesn't (natively) support the mrc
>> file format. Am I right? There is any plan to include microscopy file
>> formats into itk?
>> (At the moment I'm using a mrc-MetaIO (and vice-versa) converter I wrote,
>> I don't have any problem to publish the software somewhere if useful to
>> other people).
>>
>> cheers,
>> Mauro
>>
>>
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>
>
>
> --
> Sergio Vera
>
>  Alma IT Systems
>  C/ Vilana, 4B, 4º 1ª
>  08022 Barcelona
>  T. (+34) 932 380 592
>  www.alma3d.com
>
> _____________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Kitware offers ITK Training Courses, for more information visit:
> http://www.kitware.com/products/protraining.html
>
> Please keep messages on-topic and check the ITK FAQ at:
> http://www.itk.org/Wiki/ITK_FAQ
>
> Follow this link to subscribe/unsubscribe:
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