[Insight-users] DeformableMesh3DFilter example doesn't change input
Benjamin Klimczak
klimczaks at gmx.de
Sun Aug 16 08:13:06 EDT 2009
Hi Luis,
thanks for looking into my problem.
I have also tried to use the
itkDeformableSimplexMesh3DGradientConstraintForceFilter.h but I ran into
strange template compiler errors when I created a simplex mesh, i.e.
when I used the TriangleMeshToSimplexMeshFilter. The code of this test
is attached.
Thanks again and best regards,
Benjamin
Luis Ibanez schrieb:
>
> Hi Benjamin,
>
> Thanks for sharing the images.
>
> Please find attached a modified version of the deformable model
> example that will read your mask, extract an isosurface from it and
> pass the data to the deformable model filter.
>
> With this code we have reproduced your observation that the
> surface doesn't propagate with the current parameters.
>
> We are now trying with the filter
> itkDeformableSimplexMesh3DGradientConstraintForceFilter.h
>
> which is more commonly used...
>
>
>
> Regards,
>
>
> Luis,
>
>
> -----------------------------------------
> On Thu, Aug 13, 2009 at 9:05 AM, Benjamin Klimczak <klimczaks at gmx.de
> <mailto:klimczaks at gmx.de>> wrote:
>
> Hi Luis,
>
> thank you for the answer and I'm sorry for the late reply.
> I tried the suggested values from DeformableModel2.cxx in
> DeformableModel1.cxx, but still nothing is changed by the filter.
> I have uploaded the data I use here (image and segmentation):
>
> http://www.lfb.rwth-aachen.de/public/aorta_img.vtk
> http://www.lfb.rwth-aachen.de/public/aorta_seg.vtk
>
> I'm working with the MITK btw. and have created the segmentation
> with its GUI application.
>
> Any hint why this isn't working would be welcome.
>
> Thanks a lot,
> Benjamin
>
>
> -------- Original-Nachricht --------
> > Datum: Sat, 8 Aug 2009 11:13:23 -0400
> > Von: Luis Ibanez <luis.ibanez at kitware.com
> <mailto:luis.ibanez at kitware.com>>
> > An: Benjamin Klimczak <klimczaks at gmx.de <mailto:klimczaks at gmx.de>>
> > CC: insight-users at itk.org <mailto:insight-users at itk.org>
> > Betreff: Re: [Insight-users] DeformableMesh3DFilter example
> doesn\'t change input
>
> > Hi Benjamin,
> >
> > Please look at the suggested values in DeformableModel2.cxx
> >
> > If that still doesn't work for you, we may need to have access to
> > the image that you are using to give you more guidance.
> >
> >
> > Regards,
> >
> >
> > Luis
> >
> >
> >
> -----------------------------------------------------------------------------------------
> > On Fri, Aug 7, 2009 at 6:01 AM, Benjamin Klimczak
> <klimczaks at gmx.de <mailto:klimczaks at gmx.de>>
> > wrote:
> >
> > > Hello everybody.
> > >
> > > I can't get the DeformableMesh3DFilter from the example
> > > Examples/Segmentation/DeformableModel1.cxx to change my input
> data.
> > Input
> > > and output mesh are identical. I have tried different input
> files and
> > > extreme settings of the parameters but nothing seems to work.
> > >
> > > Thanks for any help.
> > >
> > > Regards
> > > Benjamin
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