[Insight-users] Re : Re : Re : Re : Re : trying examples

[Syrine Sahmim]

Where exactly please?






________________________________
De : nithin shekar <nithinshekar1 at gmail.com>
À : Syrine Sahmim <syrine.sahmim at yahoo.fr>
Envoyé le : Vendredi, 31 Juillet 2009, 19h56mn 31s
Objet : Re: Re : [Insight-users] Re : Re : Re : trying examples

www.itk.org



On Sat, Aug 1, 2009 at 2:39 AM, Syrine Sahmim <syrine.sahmim at yahoo.fr> wrote:

Hi,
>where can i find it exactly
>>Ihave a look to itk/application and i don't find this file
>thanks
>
>
>
>
________________________________
De : nithin shekar <nithinshekar1 at gmail.com>
>
>À : Syrine Sahmim <syrine.sahmim at yahoo.fr>
>Envoyé le : Vendredi, 31 Juillet 2009, 17h37mn 21s
>Objet : Re: [Insight-users] Re : Re : Re : trying examples
>
>
>have look at dicom viewer.cxx in itk
> application
>
>
>On Fri, Jul 31, 2009 at 11:00 PM, Syrine Sahmim <syrine.sahmim at yahoo.fr> wrote:
>
>Hi,
>>
>>>>If i understand right what you have sent: 
>>first  imust just to read a dicom series and not right it and then i add to this the program of region growing: in one file it is right!!
>>and to display the result how can i do?
>>>>
>>Regards
>>
>>
________________________________
De : Luis Ibanez <luis.ibanez at kitware.com>
>>À : Syrine Sahmim <syrine.sahmim at yahoo.fr>
>>Cc : David Doria <daviddoria+itk at gmail.com>; insight-users at itk.org
>>Envoyé le : Vendredi, 31 Juillet 2009, 15h47mn 19s
>>Objet : Re: [Insight-users] Re : Re : trying examples
>>
>>
>>
>>Hi Syrine,
>>
>>In order to read a 3D Dicom series, 
>>you should take the initial half of the example 
>>
>>Insight/Examples/IO/
>>    DicomSeriesReadImageWrite2.cxx
>>
>>That is, you must use the ImageSeriesReader
>>>>
>>
>>class instead of the ImageFileReader class.
>>The input then will be the Directory where you
>>have your DICOM series.
>>
>>
>>Then, 
>>in your instantiation of the region growing
>>filter, you should use dimension = 3.
>>
>>
>>   Regards,
>>
>>
>>         Luis
>>
>>
>>-----------------------------------------------------------
>>
>>On Fri, Jul 31, 2009 at 9:21 AM, Syrine Sahmim <syrine.sahmim at yahoo.fr> wrote:
>>
>>Hi,
>>>
>>>
>>>>>You should see a good set of test parameters in the example cxx, in this case:
>>>>>>//    INPUTS: {BrainProtonDensitySlice.png}
>>>//    OUTPUTS: {DiscreteGaussianImageFilterOutput.png}
>>>//    4 9
>>>
>>>This is my problem i don't know how modify in the code to test it with my own data. and i want to sbe more precise i have a 3D dicom serie, and i don't find how to put them as parameter.
>>>>>>
>>>
>>>Thanks 
>>>
>>>
________________________________
De : David Doria <daviddoria+itk at gmail.com>
>>>Cc : insight-users at itk.org
>>>Envoyé le : Vendredi, 31 Juillet 2009, 14h06mn 53s
>>>Objet : Re: [Insight-users] Re :  trying examples
>>>
>>>
>>>
>>>
>>>
>>>On Fri, Jul 31, 2009 at 8:55 AM, Syrine Sahmim
>>> <syrine.sahmim at yahoo.fr> wrote:
>>>
>>>Hi, 
>>>>
>>>>I tried the region growing example and the discrete gaussian filter examples.for the first one i don't have the.exe file and for the second when i debogue it i obtain the message "inputImageFile  outputImageFile  variance  maxKernelWidth" given in the code.
>>>>>>>>
>>>>
>>>>
>>>>No image filtred!!
>>>>so how can i do to have a correct result?
>>>>i just take the example and configure it with cmake , build it and then run it? is there other steps that i must do?
>>>>
>>>>Regards
>>>>
>>>
>>>When you see the message "inputImageFile  outputImageFile  variance  maxKernelWidth", that is telling you the required arguments.
>>>
>>>You should see a good set of test parameters in the example cxx, in this case:
>>>>>>
>>>
>>>
>>>//    INPUTS: {BrainProtonDensitySlice.png}
>>>//    OUTPUTS: {DiscreteGaussianImageFilterOutput.png}
>>>//    4 9
>>>
>>>(although in this case I think 4 and 9 are supposed to be the variance and maxKernelWidth params even though they show up after the output instead of in the input??)
>>>
>>>I searched for "region" and "grow" and didn't see a region growing example - maybe you can give the actual name of the example you are looking for?
>>>
>>>Thanks,
>>>
>>>David 
>>>
>>>
>>>_____________________________________
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>>>>>>Please keep messages on-topic and check the ITK FAQ at: http://www.itk.org/Wiki/ITK_FAQ
>>>
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>>>
>>
>>
>>_____________________________________
>>>>Powered by www.kitware.com
>>
>>>>Visit other Kitware open-source projects at
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>>
>>>>Please keep messages on-topic and check the ITK FAQ at: http://www.itk.org/Wiki/ITK_FAQ
>>
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>>
>
>



      
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