[ITK-dev] link failure ITKVideoBridgeOpenCVHeaderTest1 on Ubuntu 14.04

Arnaud Gelas arnaudgelas at gmail.com
Fri Aug 14 12:34:46 EDT 2015 

Here is the resulting link error:

[1563/1563] Linking CXX executable bin/ITKVideoBridgeOpenCVTestDriver
FAILED: : && /usr/lib/ccache/c++   -Wall -Wextra  -Wall -Wcast-align
-Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch
-Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings
-funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof
-Woverloaded-virtual -Wstrict-null-sentinel  -Wno-array-bounds -msse2 -g
Modules/Video/BridgeOpenCV/test/CMakeFiles/ITKVideoBridgeOpenCVTestDriver.dir/ITKVideoBridgeOpenCVTestDriver.cxx.o
Modules/Video/BridgeOpenCV/test/CMakeFiles/ITKVideoBridgeOpenCVTestDriver.dir/itkOpenCVVideoCaptureTest.cxx.o
Modules/Video/BridgeOpenCV/test/CMakeFiles/ITKVideoBridgeOpenCVTestDriver.dir/itkOpenCVImageBridgeGrayScaleTest.cxx.o
Modules/Video/BridgeOpenCV/test/CMakeFiles/ITKVideoBridgeOpenCVTestDriver.dir/itkOpenCVImageBridgeRGBTest.cxx.o
Modules/Video/BridgeOpenCV/test/CMakeFiles/ITKVideoBridgeOpenCVTestDriver.dir/itkOpenCVVideoIOTest.cxx.o
Modules/Video/BridgeOpenCV/test/CMakeFiles/ITKVideoBridgeOpenCVTestDriver.dir/itkOpenCVVideoIOFactoryTest.cxx.o
Modules/Video/BridgeOpenCV/test/CMakeFiles/ITKVideoBridgeOpenCVTestDriver.dir/itkOpenCVBasicTypeBridgeTest.cxx.o
-o bin/ITKVideoBridgeOpenCVTestDriver  -rdynamic
lib/libitkdouble-conversion-4.9.so.1 lib/libITKIOBMP-4.9.so.1
lib/libITKIOGDCM-4.9.so.1 lib/libITKIOGIPL-4.9.so.1
lib/libITKIOImageBase-4.9.so.1 lib/libITKIOJPEG-4.9.so.1
lib/libITKIOMeta-4.9.so.1 lib/libITKIONIFTI-4.9.so.1
lib/libITKIONRRD-4.9.so.1 lib/libITKIOPNG-4.9.so.1
lib/libITKIOTIFF-4.9.so.1 lib/libITKIOVTK-4.9.so.1 lib/libitksys-4.9.so.1
lib/libITKVideoBridgeOpenCV-4.9.so.1
/home/arnaud/install/lib/libopencv_videostab.so.2.4.9
/home/arnaud/install/lib/libopencv_video.so.2.4.9
/home/arnaud/install/lib/libopencv_ts.a
/home/arnaud/install/lib/libopencv_superres.so.2.4.9
/home/arnaud/install/lib/libopencv_stitching.so.2.4.9
/home/arnaud/install/lib/libopencv_photo.so.2.4.9
/home/arnaud/install/lib/libopencv_ocl.so.2.4.9
/home/arnaud/install/lib/libopencv_objdetect.so.2.4.9
/home/arnaud/install/lib/libopencv_nonfree.so.2.4.9
/home/arnaud/install/lib/libopencv_ml.so.2.4.9
/home/arnaud/install/lib/libopencv_legacy.so.2.4.9
/home/arnaud/install/lib/libopencv_imgproc.so.2.4.9
/home/arnaud/install/lib/libopencv_highgui.so.2.4.9
/home/arnaud/install/lib/libopencv_gpu.so.2.4.9
/home/arnaud/install/lib/libopencv_flann.so.2.4.9
/home/arnaud/install/lib/libopencv_features2d.so.2.4.9
/home/arnaud/install/lib/libopencv_core.so.2.4.9
/home/arnaud/install/lib/libopencv_contrib.so.2.4.9
/home/arnaud/install/lib/libopencv_calib3d.so.2.4.9
lib/libitkdouble-conversion-4.9.so.1 lib/libITKIOBMP-4.9.so.1
lib/libITKIOGDCM-4.9.so.1 lib/libITKIOGIPL-4.9.so.1
lib/libITKIOImageBase-4.9.so.1 lib/libITKIOJPEG-4.9.so.1
lib/libITKIOMeta-4.9.so.1 lib/libITKIONIFTI-4.9.so.1
lib/libITKIONRRD-4.9.so.1 lib/libITKIOPNG-4.9.so.1
lib/libITKIOTIFF-4.9.so.1 lib/libITKIOVTK-4.9.so.1 lib/libitksys-4.9.so.1
-lpthread -lrt -ltbb /home/arnaud/install/lib/libopencv_nonfree.so.2.4.9
/home/arnaud/install/lib/libopencv_ocl.so.2.4.9
/home/arnaud/install/lib/libopencv_gpu.so.2.4.9
/home/arnaud/install/lib/libopencv_photo.so.2.4.9
/home/arnaud/install/lib/libopencv_objdetect.so.2.4.9
/home/arnaud/install/lib/libopencv_legacy.so.2.4.9
/home/arnaud/install/lib/libopencv_video.so.2.4.9
/home/arnaud/install/lib/libopencv_ml.so.2.4.9
/home/arnaud/install/lib/libopencv_calib3d.so.2.4.9
/home/arnaud/install/lib/libopencv_features2d.so.2.4.9
/home/arnaud/install/lib/libopencv_highgui.so.2.4.9
/home/arnaud/install/lib/libopencv_imgproc.so.2.4.9
/home/arnaud/install/lib/libopencv_flann.so.2.4.9
/home/arnaud/install/lib/libopencv_core.so.2.4.9 lib/libITKVideoIO-4.9.so.1
lib/libITKIOImageBase-4.9.so.1 lib/libITKVideoCore-4.9.so.1
lib/libITKCommon-4.9.so.1 lib/libitkdouble-conversion-4.9.so.1
lib/libitksys-4.9.so.1 lib/libITKVNLInstantiation-4.9.so.1
lib/libitkvnl_algo-4.9.so.1 lib/libitkv3p_lsqr-4.9.so.1
lib/libitkvnl-4.9.so.1 lib/libitkvcl-4.9.so.1 lib/libitkv3p_netlib-4.9.so.1
-lm -lpthread -lm -ldl
-Wl,-rpath,/home/arnaud/source/build-itk/lib:/home/arnaud/install/lib
-Wl,-rpath-link,/home/arnaud/source/build-itk/lib && :
Modules/Video/BridgeOpenCV/test/CMakeFiles/ITKVideoBridgeOpenCVTestDriver.dir/itkOpenCVVideoCaptureTest.cxx.o:
In function `itk::OpenCVVideoIOFactory::New()':
/home/arnaud/source/itk/Modules/Video/BridgeOpenCV/include/itkOpenCVVideoIOFactory.h:46:
undefined reference to `itk::OpenCVVideoIOFactory::OpenCVVideoIOFactory()'
Modules/Video/BridgeOpenCV/test/CMakeFiles/ITKVideoBridgeOpenCVTestDriver.dir/itkOpenCVVideoIOTest.cxx.o:
In function `itk::OpenCVVideoIO::New()':
/home/arnaud/source/itk/Modules/Video/BridgeOpenCV/include/itkOpenCVVideoIO.h:48:
undefined reference to `itk::OpenCVVideoIO::OpenCVVideoIO()'
Modules/Video/BridgeOpenCV/test/CMakeFiles/ITKVideoBridgeOpenCVTestDriver.dir/itkOpenCVVideoIOTest.cxx.o:
In function `itk::ObjectFactory<itk::OpenCVVideoIO>::Create()':
/home/arnaud/source/itk/Modules/Core/Common/include/itkObjectFactory.h:60:
undefined reference to `typeinfo for itk::OpenCVVideoIO'
/home/arnaud/source/itk/Modules/Core/Common/include/itkObjectFactory.h:62:
undefined reference to `typeinfo for itk::OpenCVVideoIO'
collect2: error: ld returned 1 exit status
ninja: build stopped: subcommand failed.


On Fri, Aug 14, 2015 at 6:24 PM, Arnaud Gelas <arnaudgelas at gmail.com> wrote:

> I have already tried it, does not solve it... I will retry it with a fresh
> build once again...
>
> On Fri, Aug 14, 2015 at 6:11 PM, Matt McCormick <
> matt.mccormick at kitware.com> wrote:
>
>> Hi Arnaud,
>>
>> Yes, you are probably right.  The suggestion by Zach in this patch (to
>> use DEPENDS) is promising:
>>
>>   http://review.source.kitware.com/#/c/20078/
>>
>> Thanks,
>> Matt
>>
>> On Fri, Aug 14, 2015 at 2:21 AM, Arnaud Gelas <arnaudgelas at gmail.com>
>> wrote:
>> > Hi Matt,
>> >
>> > It happened while directly building ITK with OpenCV 2.4.9, without any
>> > superbuild...
>> > Thanks for the patch, but that does not solve it...
>> >
>> > I wonder if it could have something to do with the new linking system
>> (note
>> > it uses COMPILE_DEPENDS) ?
>> >
>> > Thanks,
>> > Arnaud
>> >
>> > On Thu, Aug 13, 2015 at 6:41 PM, Matt McCormick <
>> matt.mccormick at kitware.com>
>> > wrote:
>> >>
>> >> Hi Arnaud,
>> >>
>> >> Is this with building the examples with the superbuild?  I think I was
>> >> getting this error, too.  Here is a patch that should address it:
>> >>
>> >>   http://review.source.kitware.com/#/c/20077/
>> >>
>> >> Thanks,
>> >> Matt
>> >>
>> >> On Thu, Aug 13, 2015 at 11:40 AM, Arnaud Gelas <arnaudgelas at gmail.com>
>> >> wrote:
>> >> > Hi all,
>> >> >
>> >> > I have just tried building ITK with BridgeOpenCV on Ubuntu 14.04 and
>> I
>> >> > get
>> >> > the following link error
>> >> >
>> >> > [2/2] Linking CXX executable bin/ITKVideoBridgeOpenCVHeaderTest1
>> >> >
>> >> > [...]
>> >> >
>> >> > lib/libITKVideoBridgeOpenCV-4.9.so.1: error: undefined reference to
>> >> > 'itk::VideoIOBase::VideoIOBase()'
>> >> > lib/libITKVideoBridgeOpenCV-4.9.so.1: error: undefined reference to
>> >> > 'itk::VideoIOBase::~VideoIOBase()'
>> >> > lib/libITKVideoBridgeOpenCV-4.9.so.1: error: undefined reference to
>> >> > 'itk::VideoIOBase::PrintSelf(std::ostream&, itk::Indent) const'
>> >> > lib/libITKVideoBridgeOpenCV-4.9.so.1: error: undefined reference to
>> >> > 'typeinfo for itk::VideoIOBase'
>> >> > collect2: error: ld returned 1 exit status
>> >> >
>> >> > I have checked these methods are implemented in itkVideoIOBase.cxx...
>> >> >
>> >> > Any idea?
>> >> >
>> >> > Thanks
>> >> > Arnaud
>> >> >
>> >> > _______________________________________________
>> >> > Powered by www.kitware.com
>> >> >
>> >> > Visit other Kitware open-source projects at
>> >> > http://www.kitware.com/opensource/opensource.html
>> >> >
>> >> > Kitware offers ITK Training Courses, for more information visit:
>> >> > http://kitware.com/products/protraining.php
>> >> >
>> >> > Please keep messages on-topic and check the ITK FAQ at:
>> >> > http://www.itk.org/Wiki/ITK_FAQ
>> >> >
>> >> > Follow this link to subscribe/unsubscribe:
>> >> > http://public.kitware.com/mailman/listinfo/insight-developers
>> >> >
>> >
>> >
>>
>
>
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://public.kitware.com/pipermail/insight-developers/attachments/20150814/c42ca9d5/attachment.html>

More information about the Insight-developers mailing list