[Insight-developers] Q about adding new filter.

Matt McCormick matt.mccormick at kitware.com
Tue Jul 2 11:01:22 EDT 2013


Hi guys,

I think Insight Journal submissions are laudable for their ability to
provide documentation and an example surrounding the code.  When
someone finds a class, it would be excellent if their was an Insight
Journal article surrounding that is more informative than the Doxygen
documentation.

That said, Kent's remark that there is a "not-inconsiderable effort of
producing a journal article" indicates a problem in the complexity of
the submission process.  Either there is an issue with the impression
of how difficult it is to produce an article, or it is actually to
hard to produce an article (or both).  Feedback on how to improve the
situation is welcome.

I helped Arnaud with the LaTeX style files so that he could write his
recent submission [1] in reStructuredText [2].

I think cleaning that up and presenting it as a submission option would help.  I
also discovered Dexy [3] this week.  Thinking of ways to support it may also
encourage more submissions.

There is also the Remote Module [4] system, which I will be improving, but I
think it is a good option.

Thanks,
Matt

[1] http://hdl.handle.net/10380/3410
[2] http://docutils.sourceforge.net/rst.html
[3] http://www.dexy.it/
[4] http://www.itk.org/Wiki/ITK/Policy_and_Procedures_for_Adding_Remote_Modules


On Fri, Jun 14, 2013 at 5:20 PM, Torsten Rohlfing
<torsten.rohlfing at sri.com> wrote:
> Hi Guys -
>
> Thanks for keeping me in the loop.
>
> Just to chime in - I hereby place the ITK tools on my Stanford home page
> (http://www.stanford.edu/~rohlfing/software/index.html) in the public
> domain.
>
> Feel free to use any and all of these as you see fit.
>
> Best,
>   Torsten
>
>
> On 06/14/2013 07:20 AM, Nick Tustison wrote:
>>
>> This scenario has a precedent even to the detail of being one
>> of Torsten's filters.   Torsten wrote a multi-label STAPLE filter
>> that I wanted to include in ITK.  I pulled it directly from his website,
>> told Torsten of my intentions, made a few stylistic changes for
>> ITK coding standards, wrote a test, and then submitted as a simple
>> gerrit patch.  it was merged within a couple days.
>>
>> Nick
>>
>>
>> On Jun 14, 2013, at 10:15 AM, "Williams, Norman K"
>> <norman-k-williams at uiowa.edu> wrote:
>>
>>> Some time back, Torsten Rohlfing wrote a filter that I found useful in a
>>> program I'm working on: An AverageImageFilter.
>>>
>>> The source code is available here:
>>> http://www.stanford.edu/~rohlfing/software/
>>>
>>> At the time he posted about it on the ITK developer's list (2005!) Luis
>>> ibanez recommended he submit it as an Insight Journal article. Mr.
>>> Rohlfing did not do this at the time.
>>>
>>> Averaging images is actually fairly common thing in image processing.
>>> Rohlfing's implmentation was exactly the sort of multithreaded
>>> implementation I contemplated writing myself.
>>>
>>> The question: If I want to get this into ITK, should I just submit a
>>> Gerrit Patch, or go through the process of writing an Insight Journal
>>> article?  I'm tempted by the gerrit route because it leaves out the
>>> not-inconsiderable effort of producing a journal article.
>>>
>>> --
>>> Kent Williams norman-k-williams at uiowa.edu
>>>
>>>
>>>
>>>
>>>
>>>
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>
>
> --
> Torsten Rohlfing, PhD          SRI International, Neuroscience Program
>  Program Director               333 Ravenswood Ave, Menlo Park, CA 94025
>   Phone: ++1 (650) 859-3379      Fax: ++1 (650) 859-2743
>    torsten at synapse.sri.com        http://www.stanford.edu/~rohlfing/
>
>      "Though this be madness, yet there is a method in't"
>
>
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>
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> http://kitware.com/products/protraining.php
>
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