[Insight-developers] Debian Sid _nrrdRead: sanity check FAILED

Paul Novotny paul at paulnovo.us
Fri Jun 15 09:20:09 EDT 2012


Sorry, I didn't send this to you guys too. I just sent it to debian-med.
Here is the patch.

On Fri, 2012-06-15 at 09:12 -0400, Bradley Lowekamp wrote:
> Hello,
> 
> 
> I have unfortunately looked at many of the other 59 failing tests for
> the 32-bit Debian sid (unstable) with gcc 4.7.0-12. I say unfortunate
> because it sounds familiar and like is should be fixable, and should
> not be punted.
> 
> 
> http://open.cdash.org/viewTest.php?onlyfailed&buildid=2363925
> 
> 
> It looks like they are all related to the same problem emitting from
> the NRRDIO library. Moreover, I recall that we have run into issue
> with NRRD being rather assertive with what is expects with NAN
> floating point handing before too. I think I have seen this error
> before.
> 
> 
> And this is a typical error message:
> 
> 
> itk::ExceptionObject (0x980deb8)
> Location: "unknown" 
> File: /var/lib/jenkins/jobs/ITK-v4-Testing-32-chroot/workspace/MyTests/ITK/Modules/IO/NRRD/src/itkNrrdImageIO.cxx
> Line: 257
> Description: itk::ERROR: NrrdImageIO(0x980d738): ReadImageInformation:
> Error
> reading /var/lib/jenkins/jobs/ITK-v4-Testing-32-chroot/workspace/MyTests/ITK-build/ExternalData/Testing/Data/Input/DwiCorpusCallosum.nhdr:
> [nrrd] nrrdLoad: trouble reading
> "/var/lib/jenkins/jobs/ITK-v4-Testing-32-chroot/workspace/MyTests/ITK-build/ExternalData/Testing/Data/Input/DwiCorpusCallosum.nhdr"
> [nrrd] nrrdRead: trouble
> [nrrd] _nrrdRead: sanity check FAILED: have to fix and re-compile
> [nrrd] nrrdSanity: airSanity() failed: airFPClass(AIR_QNAN,AIR_SNAN)
> wrong
> 
> 
> 
> 
> I am searching my email archive for related messages... I know we have
> had this issue before on certain platforms.
> 
> 
> Brad
> 
> ========================================================
> 
> Bradley Lowekamp  
> 
> Medical Science and Computing for
> 
> Office of High Performance Computing and Communications
> 
> National Library of Medicine 
> 
> blowekamp at mail.nih.gov
> 
> 
> 
> 
> 
> 

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