[Insight-developers] SimpleITK compilation error

[Arnaud Gelas]

My machine is a debian squeeze (64 bits)
Mono (version): 2.6.7-5
gcc: 4.6.1

It was working fine yesterday (after removing the dependency to curses)...

---

I am giving a try on next, to check if it has not been fixed there...

On 09/30/2011 09:25 AM, Bradley Lowekamp wrote:
> Hello Arnaud,
>
> This error looks only related to CSharp. Dan Mueller is the CSharp 
> expert, hopefully he as some insight.
>
> What version of OS, and mono are you using?
>
> Thanks for let up know what's not working for you,
> Brad
>
> On Sep 30, 2011, at 9:17 AM, Arnaud Gelas wrote:
>
>> Hi Brad,
>>
>> I am recompiling SimpleITK (master) this morning and I get compilation
>> errors (see errors below).
>>
>> BTW, is there a mailing list for SimpleITK where I could post such a
>> message?
>>
>> Thanks,
>> Arnaud
>>
>> Linking CXX shared module ../../lib/_SimpleITK.so
>> Creating Python virtualenv
>> Already using interpreter /usr/bin/python2.6
>> New python executable in
>> /home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Testing/Installation/PythonVirtualenv/bin/python2.6
>> Also creating executable in
>> /home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Testing/Installation/PythonVirtualenv/bin/python
>> [ 56%] Built target SimpleITKUnitTestDriver
>> Installing
>> distribute....................................................................................................................................................................................done.
>> Installing
>> pip.../home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/InterpolateFunctionEnum.cs(12,122): 
>>
>> error CS0117: `itk.simple.SimpleITKPINVOKE' does not contain a
>> definition for `sitkUnknow_get'
>> /home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/SimpleITKPINVOKE.cs(14,7): 
>>
>> (Location of the symbol related to previous error)
>> /home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/InterpolateFunctionEnum.cs(12,139): 
>>
>> error CS1502: The best overloaded method match for
>> `itk.simple.InterpolateFunctionEnum.InterpolateFunctionEnum(string,
>> itk.simple.InterpolateFunctionEnum)' has some invalid arguments
>> /home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/InterpolateFunctionEnum.cs(43,11): 
>>
>> (Location of the symbol related to previous error)
>> /home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/InterpolateFunctionEnum.cs(12,139): 
>>
>> error CS1503: Argument `#2' cannot convert `object' expression to type
>> `itk.simple.InterpolateFunctionEnum'
>> /home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/InterpolateFunctionEnum.cs(13,140): 
>>
>> error CS0117: `itk.simple.SimpleITKPINVOKE' does not contain a
>> definition for `sitkNearestNeighbor_get'
>> /home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/SimpleITKPINVOKE.cs(14,7): 
>>
>> (Location of the symbol related to previous error)
>> /home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/InterpolateFunctionEnum.cs(13,166): 
>>
>> error CS1502: The best overloaded method match for
>> `itk.simple.InterpolateFunctionEnum.InterpolateFunctionEnum(string,
>> itk.simple.InterpolateFunctionEnum)' has some invalid arguments
>> /home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/InterpolateFunctionEnum.cs(43,11): 
>>
>> (Location of the symbol related to previous error)
>> /home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/InterpolateFunctionEnum.cs(13,166): 
>>
>> error CS1503: Argument `#2' cannot convert `object' expression to type
>> `itk.simple.InterpolateFunctionEnum'
>> /home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/InterpolateFunctionEnum.cs(14,144): 
>>
>> error CS0117: `itk.simple.SimpleITKPINVOKE' does not contain a
>> definition for `sitkLinearInterpolate_get'
>> /home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/SimpleITKPINVOKE.cs(14,7): 
>>
>> (Location of the symbol related to previous error)
>> /home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/InterpolateFunctionEnum.cs(14,172): 
>>
>> error CS1502: The best overloaded method match for
>> `itk.simple.InterpolateFunctionEnum.InterpolateFunctionEnum(string,
>> itk.simple.InterpolateFunctionEnum)' has some invalid arguments
>> /home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/InterpolateFunctionEnum.cs(43,11): 
>>
>> (Location of the symbol related to previous error)
>> /home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/InterpolateFunctionEnum.cs(14,172): 
>>
>> error CS1503: Argument `#2' cannot convert `object' expression to type
>> `itk.simple.InterpolateFunctionEnum'
>> /home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/InterpolateFunctionEnum.cs(15,134): 
>>
>> error CS0117: `itk.simple.SimpleITKPINVOKE' does not contain a
>> definition for `sitkWindowedSinc_get'
>> /home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/SimpleITKPINVOKE.cs(14,7): 
>>
>> (Location of the symbol related to previous error)
>> /home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/InterpolateFunctionEnum.cs(15,157): 
>>
>> error CS1502: The best overloaded method match for
>> `itk.simple.InterpolateFunctionEnum.InterpolateFunctionEnum(string,
>> itk.simple.InterpolateFunctionEnum)' has some invalid arguments
>> /home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/InterpolateFunctionEnum.cs(43,11): 
>>
>> (Location of the symbol related to previous error)
>> /home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/InterpolateFunctionEnum.cs(15,157): 
>>
>> error CS1503: Argument `#2' cannot convert `object' expression to type
>> `itk.simple.InterpolateFunctionEnum'
>> /home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/ResampleImageFilter.cs(17,86): 
>>
>> error CS0117: `itk.simple.SimpleITKPINVOKE' does not contain a
>> definition for `ResampleImageFilter_SWIGUpcast'
>> /home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/SimpleITKPINVOKE.cs(14,7): 
>>
>> (Location of the symbol related to previous error)
>> /home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/ResampleImageFilter.cs(17,64): 
>>
>> error CS1502: The best overloaded method match for
>> `itk.simple.ImageFilter.ImageFilter(System.IntPtr, bool)' has some
>> invalid arguments
>> /home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/ImageFilter.cs(18,12): 
>>
>> (Location of the symbol related to previous error)
>> /home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/ResampleImageFilter.cs(17,64): 
>>
>> error CS1503: Argument `#1' cannot convert `object' expression to type
>> `System.IntPtr'
>> /home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/ResampleImageFilter.cs(43,56): 
>>
>> error CS0117: `itk.simple.SimpleITKPINVOKE' does not contain a
>> definition for `new_ResampleImageFilter'
>> /home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/SimpleITKPINVOKE.cs(14,7): 
>>
>> (Location of the symbol related to previous error)
>> /home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/ResampleImageFilter.cs(43,34): 
>>
>> error CS1502: The best overloaded method match for
>> `itk.simple.ResampleImageFilter.ResampleImageFilter(System.IntPtr,
>> bool)' has some invalid arguments
>> /home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/ResampleImageFilter.cs(17,12): 
>>
>> (Location of the symbol related to previous error)
>> /home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/ResampleImageFilter.cs(43,34): 
>>
>> error CS1503: Argument `#1' cannot convert `object' expression to type
>> `System.IntPtr'
>> /home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/SOptimizer.cs(44,47): 
>>
>> error CS0117: `itk.simple.SimpleITKPINVOKE' does not contain a
>> definition for `new_SOptimizer'
>> /home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/SimpleITKPINVOKE.cs(14,7): 
>>
>> (Location of the symbol related to previous error)
>> /home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/SOptimizer.cs(44,25): 
>>
>> error CS1502: The best overloaded method match for
>> `itk.simple.SOptimizer.SOptimizer(System.IntPtr, bool)' has some invalid
>> arguments
>> /home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/SOptimizer.cs(18,12): 
>>
>> (Location of the symbol related to previous error)
>> /home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/SOptimizer.cs(44,25): 
>>
>> error CS1503: Argument `#1' cannot convert `object' expression to type
>> `System.IntPtr'
>> Compilation failed: 21 error(s), 0 warnings
>> make[5]: *** [Wrapping/SimpleITKCSharpManaged.dll] Error 1
>> make[4]: *** [Wrapping/CMakeFiles/SimpleITKCSharpManaged.dir/all] Error 2
>> make[4]: *** Waiting for unfinished jobs....
>> ..................done.
>> Installing python module to the virtualenv
>> running install
>> running bdist_egg
>> running egg_info
>> writing SimpleITK.egg-info/PKG-INFO
>> writing top-level names to SimpleITK.egg-info/top_level.txt
>> writing dependency_links to SimpleITK.egg-info/dependency_links.txt
>> warning: manifest_maker: standard file 'setup.py' not found
>> reading manifest file 'SimpleITK.egg-info/SOURCES.txt'
>> writing manifest file 'SimpleITK.egg-info/SOURCES.txt'
>> installing library code to build/bdist.linux-x86_64/egg
>> running install_lib
>> running build_py
>> creating build/bdist.linux-x86_64/egg
>> copying build/lib.linux-x86_64-2.6/SimpleITK.py ->
>> build/bdist.linux-x86_64/egg
>> byte-compiling build/bdist.linux-x86_64/egg/SimpleITK.py to SimpleITK.pyc
>> [ 56%] Built target org_itk_simple_jar
>> installing package data to build/bdist.linux-x86_64/egg
>> running install_data
>> copying /home/ajg23/GITROOT/SimpleITK/build/lib/_SimpleITK.so ->
>> build/bdist.linux-x86_64/egg/
>> creating build/bdist.linux-x86_64/egg/EGG-INFO
>> copying SimpleITK.egg-info/PKG-INFO -> 
>> build/bdist.linux-x86_64/egg/EGG-INFO
>> copying SimpleITK.egg-info/SOURCES.txt ->
>> build/bdist.linux-x86_64/egg/EGG-INFO
>> copying SimpleITK.egg-info/dependency_links.txt ->
>> build/bdist.linux-x86_64/egg/EGG-INFO
>> copying SimpleITK.egg-info/not-zip-safe ->
>> build/bdist.linux-x86_64/egg/EGG-INFO
>> copying SimpleITK.egg-info/top_level.txt ->
>> build/bdist.linux-x86_64/egg/EGG-INFO
>> creating 'dist/SimpleITK-0.3.0-py2.6.egg' and adding
>> 'build/bdist.linux-x86_64/egg' to it
>> removing 'build/bdist.linux-x86_64/egg' (and everything under it)
>> Processing SimpleITK-0.3.0-py2.6.egg
>> creating
>> /home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Testing/Installation/PythonVirtualenv/lib/python2.6/site-packages/SimpleITK-0.3.0-py2.6.egg
>> Extracting SimpleITK-0.3.0-py2.6.egg to
>> /home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Testing/Installation/PythonVirtualenv/lib/python2.6/site-packages
>> Adding SimpleITK 0.3.0 to easy-install.pth file
>>
>> Installed
>> /home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Testing/Installation/PythonVirtualenv/lib/python2.6/site-packages/SimpleITK-0.3.0-py2.6.egg
>> Processing dependencies for SimpleITK==0.3.0
>> Finished processing dependencies for SimpleITK==0.3.0
>> [ 57%] Built target _SimpleITK
>> make[3]: *** [all] Error 2
>> make[2]: *** [SimpleITK-prefix/src/SimpleITK-stamp/SimpleITK-build] 
>> Error 2
>> make[1]: *** [CMakeFiles/SimpleITK.dir/all] Error 2
>> make: *** [all] Error 2
>>
>
> ========================================================
>
> Bradley Lowekamp
>
> Medical Science and Computing for
>
> Office of High Performance Computing and Communications
>
> National Library of Medicine
>
> blowekamp at mail.nih.gov <mailto:blowekamp at mail.nih.gov>
>
>
>
>

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