[Insight-developers] [SimpleITK] compilation error

[Arnaud Gelas]

Hi Brad,

I am recompiling SimpleITK (master) this morning and I get compilation
errors (see errors below).

Any idea ?

Thanks,
Arnaud

Linking CXX shared module ../../lib/_SimpleITK.so
Creating Python virtualenv
Already using interpreter /usr/bin/python2.6
New python executable in
/home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Testing/Installation/PythonVirtualenv/bin/python2.6
Also creating executable in
/home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Testing/Installation/PythonVirtualenv/bin/python
[ 56%] Built target SimpleITKUnitTestDriver
Installing
distribute....................................................................................................................................................................................done.
Installing
pip.../home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/InterpolateFunctionEnum.cs(12,122):
error CS0117: `itk.simple.SimpleITKPINVOKE' does not contain a
definition for `sitkUnknow_get'
/home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/SimpleITKPINVOKE.cs(14,7):
(Location of the symbol related to previous error)
/home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/InterpolateFunctionEnum.cs(12,139):
error CS1502: The best overloaded method match for
`itk.simple.InterpolateFunctionEnum.InterpolateFunctionEnum(string,
itk.simple.InterpolateFunctionEnum)' has some invalid arguments
/home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/InterpolateFunctionEnum.cs(43,11):
(Location of the symbol related to previous error)
/home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/InterpolateFunctionEnum.cs(12,139):
error CS1503: Argument `#2' cannot convert `object' expression to type
`itk.simple.InterpolateFunctionEnum'
/home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/InterpolateFunctionEnum.cs(13,140):
error CS0117: `itk.simple.SimpleITKPINVOKE' does not contain a
definition for `sitkNearestNeighbor_get'
/home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/SimpleITKPINVOKE.cs(14,7):
(Location of the symbol related to previous error)
/home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/InterpolateFunctionEnum.cs(13,166):
error CS1502: The best overloaded method match for
`itk.simple.InterpolateFunctionEnum.InterpolateFunctionEnum(string,
itk.simple.InterpolateFunctionEnum)' has some invalid arguments
/home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/InterpolateFunctionEnum.cs(43,11):
(Location of the symbol related to previous error)
/home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/InterpolateFunctionEnum.cs(13,166):
error CS1503: Argument `#2' cannot convert `object' expression to type
`itk.simple.InterpolateFunctionEnum'
/home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/InterpolateFunctionEnum.cs(14,144):
error CS0117: `itk.simple.SimpleITKPINVOKE' does not contain a
definition for `sitkLinearInterpolate_get'
/home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/SimpleITKPINVOKE.cs(14,7):
(Location of the symbol related to previous error)
/home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/InterpolateFunctionEnum.cs(14,172):
error CS1502: The best overloaded method match for
`itk.simple.InterpolateFunctionEnum.InterpolateFunctionEnum(string,
itk.simple.InterpolateFunctionEnum)' has some invalid arguments
/home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/InterpolateFunctionEnum.cs(43,11):
(Location of the symbol related to previous error)
/home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/InterpolateFunctionEnum.cs(14,172):
error CS1503: Argument `#2' cannot convert `object' expression to type
`itk.simple.InterpolateFunctionEnum'
/home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/InterpolateFunctionEnum.cs(15,134):
error CS0117: `itk.simple.SimpleITKPINVOKE' does not contain a
definition for `sitkWindowedSinc_get'
/home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/SimpleITKPINVOKE.cs(14,7):
(Location of the symbol related to previous error)
/home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/InterpolateFunctionEnum.cs(15,157):
error CS1502: The best overloaded method match for
`itk.simple.InterpolateFunctionEnum.InterpolateFunctionEnum(string,
itk.simple.InterpolateFunctionEnum)' has some invalid arguments
/home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/InterpolateFunctionEnum.cs(43,11):
(Location of the symbol related to previous error)
/home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/InterpolateFunctionEnum.cs(15,157):
error CS1503: Argument `#2' cannot convert `object' expression to type
`itk.simple.InterpolateFunctionEnum'
/home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/ResampleImageFilter.cs(17,86):
error CS0117: `itk.simple.SimpleITKPINVOKE' does not contain a
definition for `ResampleImageFilter_SWIGUpcast'
/home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/SimpleITKPINVOKE.cs(14,7):
(Location of the symbol related to previous error)
/home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/ResampleImageFilter.cs(17,64):
error CS1502: The best overloaded method match for
`itk.simple.ImageFilter.ImageFilter(System.IntPtr, bool)' has some
invalid arguments
/home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/ImageFilter.cs(18,12):
(Location of the symbol related to previous error)
/home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/ResampleImageFilter.cs(17,64):
error CS1503: Argument `#1' cannot convert `object' expression to type
`System.IntPtr'
/home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/ResampleImageFilter.cs(43,56):
error CS0117: `itk.simple.SimpleITKPINVOKE' does not contain a
definition for `new_ResampleImageFilter'
/home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/SimpleITKPINVOKE.cs(14,7):
(Location of the symbol related to previous error)
/home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/ResampleImageFilter.cs(43,34):
error CS1502: The best overloaded method match for
`itk.simple.ResampleImageFilter.ResampleImageFilter(System.IntPtr,
bool)' has some invalid arguments
/home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/ResampleImageFilter.cs(17,12):
(Location of the symbol related to previous error)
/home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/ResampleImageFilter.cs(43,34):
error CS1503: Argument `#1' cannot convert `object' expression to type
`System.IntPtr'
/home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/SOptimizer.cs(44,47):
error CS0117: `itk.simple.SimpleITKPINVOKE' does not contain a
definition for `new_SOptimizer'
/home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/SimpleITKPINVOKE.cs(14,7):
(Location of the symbol related to previous error)
/home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/SOptimizer.cs(44,25):
error CS1502: The best overloaded method match for
`itk.simple.SOptimizer.SOptimizer(System.IntPtr, bool)' has some invalid
arguments
/home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/SOptimizer.cs(18,12):
(Location of the symbol related to previous error)
/home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Wrapping/CSharpSources/SOptimizer.cs(44,25):
error CS1503: Argument `#1' cannot convert `object' expression to type
`System.IntPtr'
Compilation failed: 21 error(s), 0 warnings
make[5]: *** [Wrapping/SimpleITKCSharpManaged.dll] Error 1
make[4]: *** [Wrapping/CMakeFiles/SimpleITKCSharpManaged.dir/all] Error 2
make[4]: *** Waiting for unfinished jobs....
..................done.
Installing python module to the virtualenv
running install
running bdist_egg
running egg_info
writing SimpleITK.egg-info/PKG-INFO
writing top-level names to SimpleITK.egg-info/top_level.txt
writing dependency_links to SimpleITK.egg-info/dependency_links.txt
warning: manifest_maker: standard file 'setup.py' not found
reading manifest file 'SimpleITK.egg-info/SOURCES.txt'
writing manifest file 'SimpleITK.egg-info/SOURCES.txt'
installing library code to build/bdist.linux-x86_64/egg
running install_lib
running build_py
creating build/bdist.linux-x86_64/egg
copying build/lib.linux-x86_64-2.6/SimpleITK.py ->
build/bdist.linux-x86_64/egg
byte-compiling build/bdist.linux-x86_64/egg/SimpleITK.py to SimpleITK.pyc
[ 56%] Built target org_itk_simple_jar
installing package data to build/bdist.linux-x86_64/egg
running install_data
copying/home/ajg23/GITROOT/SimpleITK/build/lib/_SimpleITK.so ->
build/bdist.linux-x86_64/egg/
creating build/bdist.linux-x86_64/egg/EGG-INFO
copying SimpleITK.egg-info/PKG-INFO ->  build/bdist.linux-x86_64/egg/EGG-INFO
copying SimpleITK.egg-info/SOURCES.txt ->
build/bdist.linux-x86_64/egg/EGG-INFO
copying SimpleITK.egg-info/dependency_links.txt ->
build/bdist.linux-x86_64/egg/EGG-INFO
copying SimpleITK.egg-info/not-zip-safe ->
build/bdist.linux-x86_64/egg/EGG-INFO
copying SimpleITK.egg-info/top_level.txt ->
build/bdist.linux-x86_64/egg/EGG-INFO
creating 'dist/SimpleITK-0.3.0-py2.6.egg' and adding
'build/bdist.linux-x86_64/egg' to it
removing 'build/bdist.linux-x86_64/egg' (and everything under it)
Processing SimpleITK-0.3.0-py2.6.egg
creating
/home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Testing/Installation/PythonVirtualenv/lib/python2.6/site-packages/SimpleITK-0.3.0-py2.6.egg
Extracting SimpleITK-0.3.0-py2.6.egg to
/home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Testing/Installation/PythonVirtualenv/lib/python2.6/site-packages
Adding SimpleITK 0.3.0 to easy-install.pth file

Installed
/home/ajg23/GITROOT/SimpleITK/build/SimpleITK-build/Testing/Installation/PythonVirtualenv/lib/python2.6/site-packages/SimpleITK-0.3.0-py2.6.egg
Processing dependencies for SimpleITK==0.3.0
Finished processing dependencies for SimpleITK==0.3.0
[ 57%] Built target _SimpleITK
make[3]: *** [all] Error 2
make[2]: *** [SimpleITK-prefix/src/SimpleITK-stamp/SimpleITK-build] Error 2
make[1]: *** [CMakeFiles/SimpleITK.dir/all] Error 2
make: *** [all] Error 2

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