[Insight-developers] linking error under linux and mac

[Luis Ibanez]

Hi Richard,

You may want to report this to the ITK-SNAP
developers list.

http://www.itksnap.org/pmwiki/pmwiki.php?n=MailingLists.MailingLists

The version of SNAP that we maintain in
InsightApplications is an old one.

The most recent SNAP version is now
distributed under a GPL license. So it is
unlikely that we will update to it.


     Regards,


           Luis


---------------------------------------------------
On Mon, Jun 28, 2010 at 10:02 PM, Richard Beare <richard.beare at gmail.com>wrote:

> Hi,
> I'm getting the following error with the latest version of itksnap
> from cvs. (Note this is an unmodified version).
>
> Under Linux:
>
> Linking CXX executable InsightSNAP
> /usr/bin/cmake -E cmake_link_script
> CMakeFiles/InsightSNAP.dir/link.txt --verbose=1
> /usr/bin/c++     -ftemplate-depth-50 -Wall -Wno-deprecated -msse2
> -Wno-deprecated
> CMakeFiles/InsightSNAP.dir/UserInterface/SNAPMain.cxx.o  -o
> InsightSNAP -rdynamic -L/usr/local/ITK-3.18/lib/InsightToolkit
> -L/usr/local/VTK-5.4.2/lib/vtk-5.4 -lITKAlgorithms -lITKCommon
> -lITKBasicFilters
> Utilities/FLTK/Fl_Native_File_Chooser/libfltk_native_file_chooser.a
> libitksnapui.a libitksnaplogic.a
> /usr/local/fltk-1.1.9/lib/libfltk_images.a -lpng -lz -ljpeg
> /usr/local/fltk-1.1.9/lib/libfltk.a
> /usr/local/fltk-1.1.9/lib/libfltk_gl.a
> /usr/local/fltk-1.1.9/lib/libfltk_forms.a -lSM -lICE -lX11 -lXext -lm
> -lITKIO -lvtkCommon -lvtkRendering -lvtkFiltering -lvtkGraphics
> -lvtkImaging -lvtkIO -lGLU -lGL -lSM -lICE -lX11 -lXext -lGLU
> Utilities/FLTK/Fl_Table/libfltk_table.a -lITKNrrdIO -litkgdcm
> -litkjpeg12 -litkjpeg16 -litkopenjpeg -luuid -litkpng -litktiff
> -litkjpeg8 -lITKSpatialObject -lITKMetaIO -lITKDICOMParser -lITKEXPAT
> -lITKniftiio -lITKznz -litkzlib -lvtkftgl -lvtkfreetype -lXt -lXft
> -lvtkverdict -lvtkFiltering -lvtkCommon -lvtkDICOMParser -lvtkNetCDF
> -lvtkmetaio -lvtksqlite -lvtkpng -lvtktiff -lvtkzlib -lvtkjpeg
> -lvtkexpat -lvtksys -lSM -lICE -lX11 -lXext -lGL -lITKAlgorithms
> -lITKStatistics -litkNetlibSlatec -lITKNumerics -lITKBasicFilters
> -lITKCommon -litkvnl_inst -litkvnl_algo -litkv3p_netlib -litkvnl
> -litkvcl -litkv3p_lsqr -lm -litksys -lpthread -ldl -lm
>
> -Wl,-rpath,/usr/local/ITK-3.18/lib/InsightToolkit:/usr/local/VTK-5.4.2/lib/vtk-5.4
> Utilities/FLTK/Fl_Table/libfltk_table.a(Fl_Table.cxx.o): In function
> `Fl_Table::Fl_Table(int, int, int, int, char const*)':
> Fl_Table.cxx:(.text+0x4480): undefined reference to
> `Fl_Scroll::Fl_Scroll(int, int, int, int, char const*)'
> Utilities/FLTK/Fl_Table/libfltk_table.a(Fl_Table.cxx.o): In function
> `Fl_Table::Fl_Table(int, int, int, int, char const*)':
> Fl_Table.cxx:(.text+0x4a52): undefined reference to
> `Fl_Scroll::Fl_Scroll(int, int, int, int, char const*)'
> collect2: ld returned 1 exit status
>
>
> Which I fix by changing the library order so that libfltk_table is
> immediately prior to libfltk:
>
> /usr/bin/c++     -ftemplate-depth-50 -Wall -Wno-deprecated -msse2
> -Wno-deprecated
> CMakeFiles/InsightSNAP.dir/UserInterface/SNAPMain.cxx.o  -o
> InsightSNAP -rdynamic -L/usr/local/ITK-3.18/lib/InsightToolkit
> -L/usr/local/VTK-5.4.2/lib/vtk-5.4 -lITKAlgorithms -lITKCommon
> -lITKBasicFilters
> Utilities/FLTK/Fl_Native_File_Chooser/libfltk_native_file_chooser.a
> libitksnapui.a libitksnaplogic.a
> /usr/local/fltk-1.1.9/lib/libfltk_images.a -lpng -lz -ljpeg
> Utilities/FLTK/Fl_Table/libfltk_table.a
> /usr/local/fltk-1.1.9/lib/libfltk.a
> /usr/local/fltk-1.1.9/lib/libfltk_gl.a
> /usr/local/fltk-1.1.9/lib/libfltk_forms.a -lSM -lICE -lX11 -lXext -lm
> -lITKIO -lvtkCommon -lvtkRendering -lvtkFiltering -lvtkGraphics
> -lvtkImaging -lvtkIO -lGLU -lGL -lSM -lICE -lX11 -lXext -lGLU
> Utilities/FLTK/Fl_Table/libfltk_table.a -lITKNrrdIO -litkgdcm
> -litkjpeg12 -litkjpeg16 -litkopenjpeg -luuid -litkpng -litktiff
> -litkjpeg8 -lITKSpatialObject -lITKMetaIO -lITKDICOMParser -lITKEXPAT
> -lITKniftiio -lITKznz -litkzlib -lvtkftgl -lvtkfreetype -lXt -lXft
> -lvtkverdict -lvtkFiltering -lvtkCommon -lvtkDICOMParser -lvtkNetCDF
> -lvtkmetaio -lvtksqlite -lvtkpng -lvtktiff -lvtkzlib -lvtkjpeg
> -lvtkexpat -lvtksys -lSM -lICE -lX11 -lXext -lGL -lITKAlgorithms
> -lITKStatistics -litkNetlibSlatec -lITKNumerics -lITKBasicFilters
> -lITKCommon -litkvnl_inst -litkvnl_algo -litkv3p_netlib -litkvnl
> -litkvcl -litkv3p_lsqr -lm -litksys -lpthread -ldl -lm
>
> -Wl,-rpath,/usr/local/ITK-3.18/lib/InsightToolkit:/usr/local/VTK-5.4.2/lib/vtk-5.4
>
>
>
> On the mac I had fltk link errors with jpeg and png libraries and need
> to explicitly include libfltk_png and libfltk_jpeg in the link options
> with cmake.
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