[Insight-developers] Dashboard Looking Good

[Stephen Aylward]

Hi,

Ahhh - that is the name used on Luis' computer.   No worries.

The original data is available on MIDAS, and has been conveniently
packaged by Luis on the following websites:

http://public.kitware.com/pub/itk/Data/HealthyVolunteersMRIDatabase/
- for Registration15test2 / CMake var ITK_HEALTHY....

http://public.kitware.com/pub/itk/Data/BrainWeb/
- for BrainWeb data / CMake var ...BRAINWEB...

I'm for making the data available via SVN.   The CMakeLists.txt files
could automatically download it if the user requests, just like we do
for itkLibXML2.

Another option is to have CMake fetch the data directly from the
website using CURL (which is already distributed with CMake).  I
believe this would be easy with the new version of CMake (2.6 Beta)

Perhaps we should not make the users click multiple times on a website
to download, but then again this is a one-time task that will only be
done by high-end developers/testers.

Stephen

On Sat, Apr 12, 2008 at 1:13 PM, Bill Lorensen <bill.lorensen at gmail.com> wrote:
> I noticed it in the path to this test:
>  http://www.cdash.org/CDash/testDetails.php?test=2323832&build=51555
>
>  D:\cygwin\home\ibanez\Dashboards\bin\InsightVS8Release\bin\release\RegistrationExamples14.exe
>  DeformableRegistration15Test
>  D:/cygwin/home/ibanez/data/NAMIC/KillianRegistration/Slicer3RegistrationTest_Stephen/b/I.hdr
>  D:/cygwin/home/ibanez/data/NAMIC/KillianRegistration/Slicer3RegistrationTest_Stephen/d/I.hdr
>  D:/cygwin/home/ibanez/Dashboards/bin/InsightVS8Release/Testing/Temporary/DeformableRegistration15Test2.mhd
>  D:/cygwin/home/ibanez/Dashboards/bin/InsightVS8Release/Testing/Temporary/DeformableRegistration15Test2DifferenceAfter.mhd
>  D:/cygwin/home/ibanez/Dashboards/bin/InsightVS8Release/Testing/Temporary/DeformableRegistration15Test2DifferenceBefore.mhd
>  D:/cygwin/home/ibanez/Dashboards/bin/InsightVS8Release/Testing/Temporary/DeformableRegistration15Test2DeformationField.mhd
>  0 0 D:/cygwin/home/ibanez/Dashboards/bin/InsightVS8Release/Testing/Temporary/DeformableRegistration15Test2FinalTransformParameters.txt
>  5 100 10.0 50
>
>  So where is the repository for this data and the brainweb data?
>
>  Bill
>
>
>  On Sat, Apr 12, 2008 at 12:58 PM, Stephen Aylward
>
>
> <Stephen.Aylward at kitware.com> wrote:
>  > Hi,
>  >
>  >  Ok - I might be 1/2 blind, but :)
>  >
>  >  I cannot find a reference to Kilian.   Did a grep -R Kilian * at the
>  >  top of the Insight dir.
>  >
>  >  Where is the reference that I am missing?
>  >
>  >  Thanks,
>  >  Stephen
>  >
>  >  On Sat, Apr 12, 2008 at 12:43 PM, Stephen Aylward
>  >
>  >
>  > <Stephen.Aylward at kitware.com> wrote:
>  >  > Hi,
>  >  >
>  >  >  Sorry - I should have been more clear.
>  >  >
>  >  >  You've exactly hit on the important point - we can distribute Liz's
>  >  >  data.   We cannot distribute Kilian's data.   It is important for all
>  >  >  to realize that this is Liz's data and not Kilian's.
>  >  >
>  >  >  Seems like we need to change the names so that all is clear.
>  >  >
>  >  >  Thanks,
>  >  >  Stephen
>  >  >
>  >  >
>  >  >
>  >  >  On Sat, Apr 12, 2008 at 12:10 PM, Bill Lorensen <bill.lorensen at gmail.com> wrote:
>  >  >  > Sorry, I was looking at the names of the files and directories. Are
>  >  >  >  both data sets Liz's? If we can't distribute them, then we should run
>  >  >  >  the tests on data that we distribute.\
>  >  >  >
>  >  >  >  Bill
>  >  >  >
>  >  >  >
>  >  >  >
>  >  >  >  On Sat, Apr 12, 2008 at 9:42 AM, Stephen Aylward
>  >  >  >  <Stephen.Aylward at kitware.com> wrote:
>  >  >  >  > For clarification - this is data from UNC - Dr. Bullitt - and should
>  >  >  >  >  be referred to as such.
>  >  >  >  >
>  >  >  >  >  Thanks,
>  >  >  >  >  Stephen
>  >  >  >  >
>  >  >  >  >
>  >  >  >  >
>  >  >  >  >  On Sat, Apr 12, 2008 at 9:03 AM, Bill Lorensen <bill.lorensen at gmail.com> wrote:
>  >  >  >  >  > Luis,
>  >  >  >  >  >
>  >  >  >  >  >  The changes you made to the multi res registration examples are
>  >  >  >  >  >  producing great results. Looks like we need a second regression image
>  >  >  >  >  >  for the second multi res registration example.
>  >  >  >  >  >
>  >  >  >  >  >  The tests DeformableRegistration15Test1 and
>  >  >  >  >  >  DeformableRegistration15Test2 are failing on all platforms they run
>  >  >  >  >  >  on. Looks like they use the data from BrainWeb (Test1) or Kilian
>  >  >  >  >  >  (Test2).
>  >  >  >  >  >
>  >  >  >  >  >  It's not clear to me what BrainWeb data is required to run the tests.
>  >  >  >  >  >  And I don't think Kilian's data should be in a test checked into ITK
>  >  >  >  >  >  unless we can add his data to the ITK distribution.
>  >  >  >  >  >
>  >  >  >  >  >  Bill
>  >  >  >  >  >  _______________________________________________
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>  >  >  >  >  >
>  >  >  >  >
>  >  >  >  >
>  >  >  >  >
>  >  >  >  >  --
>  >  >  >  >  Stephen R. Aylward, Ph.D.
>  >  >  >  >  Chief Medical Scientist
>  >  >  >  >  Kitware, Inc. - Chapel Hill Office
>  >  >  >  >  http://www.kitware.com
>  >  >  >  >  (518) 371-3971 x300
>  >  >  >  >
>  >  >  >
>  >  >
>  >  >
>  >  >
>  >  >  --
>  >  >
>  >  >
>  >  > Stephen R. Aylward, Ph.D.
>  >  >  Chief Medical Scientist
>  >  >  Kitware, Inc. - Chapel Hill Office
>  >  >  http://www.kitware.com
>  >  >  (518) 371-3971 x300
>  >  >
>  >
>  >
>  >
>  >  --
>  >
>  >
>  > Stephen R. Aylward, Ph.D.
>  >  Chief Medical Scientist
>  >  Kitware, Inc. - Chapel Hill Office
>  >  http://www.kitware.com
>  >  (518) 371-3971 x300
>  >
>



-- 
Stephen R. Aylward, Ph.D.
Chief Medical Scientist
Kitware, Inc. - Chapel Hill Office
http://www.kitware.com
(518) 371-3971 x300