[Insight-developers] Dashboard Looking Good

Bill Lorensen bill.lorensen at gmail.com
Sat Apr 12 13:20:37 EDT 2008


I should have looked at the CMakeLists.txt file. The data is in:
 ${ITK_MRI_UNC_DATABASE_DATA_ROOT}/b/I.hdr
The brainweb data is in:
${ITK_BRAINWEB_DATA_ROOT}

So my question is: what command do I use to check out these data
repositories that are referenced in the CMakeLists.txt file in
Examples/Registration? Perhaps that command should be placed as a
comment in the CMakeLists.txt file.

Bill

On Sat, Apr 12, 2008 at 1:13 PM, Bill Lorensen <bill.lorensen at gmail.com> wrote:
> I noticed it in the path to this test:
>  http://www.cdash.org/CDash/testDetails.php?test=2323832&build=51555
>
>  D:\cygwin\home\ibanez\Dashboards\bin\InsightVS8Release\bin\release\RegistrationExamples14.exe
>  DeformableRegistration15Test
>  D:/cygwin/home/ibanez/data/NAMIC/KillianRegistration/Slicer3RegistrationTest_Stephen/b/I.hdr
>  D:/cygwin/home/ibanez/data/NAMIC/KillianRegistration/Slicer3RegistrationTest_Stephen/d/I.hdr
>  D:/cygwin/home/ibanez/Dashboards/bin/InsightVS8Release/Testing/Temporary/DeformableRegistration15Test2.mhd
>  D:/cygwin/home/ibanez/Dashboards/bin/InsightVS8Release/Testing/Temporary/DeformableRegistration15Test2DifferenceAfter.mhd
>  D:/cygwin/home/ibanez/Dashboards/bin/InsightVS8Release/Testing/Temporary/DeformableRegistration15Test2DifferenceBefore.mhd
>  D:/cygwin/home/ibanez/Dashboards/bin/InsightVS8Release/Testing/Temporary/DeformableRegistration15Test2DeformationField.mhd
>  0 0 D:/cygwin/home/ibanez/Dashboards/bin/InsightVS8Release/Testing/Temporary/DeformableRegistration15Test2FinalTransformParameters.txt
>  5 100 10.0 50
>
>  So where is the repository for this data and the brainweb data?
>
>  Bill
>
>
>  On Sat, Apr 12, 2008 at 12:58 PM, Stephen Aylward
>
>
> <Stephen.Aylward at kitware.com> wrote:
>  > Hi,
>  >
>  >  Ok - I might be 1/2 blind, but :)
>  >
>  >  I cannot find a reference to Kilian.   Did a grep -R Kilian * at the
>  >  top of the Insight dir.
>  >
>  >  Where is the reference that I am missing?
>  >
>  >  Thanks,
>  >  Stephen
>  >
>  >  On Sat, Apr 12, 2008 at 12:43 PM, Stephen Aylward
>  >
>  >
>  > <Stephen.Aylward at kitware.com> wrote:
>  >  > Hi,
>  >  >
>  >  >  Sorry - I should have been more clear.
>  >  >
>  >  >  You've exactly hit on the important point - we can distribute Liz's
>  >  >  data.   We cannot distribute Kilian's data.   It is important for all
>  >  >  to realize that this is Liz's data and not Kilian's.
>  >  >
>  >  >  Seems like we need to change the names so that all is clear.
>  >  >
>  >  >  Thanks,
>  >  >  Stephen
>  >  >
>  >  >
>  >  >
>  >  >  On Sat, Apr 12, 2008 at 12:10 PM, Bill Lorensen <bill.lorensen at gmail.com> wrote:
>  >  >  > Sorry, I was looking at the names of the files and directories. Are
>  >  >  >  both data sets Liz's? If we can't distribute them, then we should run
>  >  >  >  the tests on data that we distribute.\
>  >  >  >
>  >  >  >  Bill
>  >  >  >
>  >  >  >
>  >  >  >
>  >  >  >  On Sat, Apr 12, 2008 at 9:42 AM, Stephen Aylward
>  >  >  >  <Stephen.Aylward at kitware.com> wrote:
>  >  >  >  > For clarification - this is data from UNC - Dr. Bullitt - and should
>  >  >  >  >  be referred to as such.
>  >  >  >  >
>  >  >  >  >  Thanks,
>  >  >  >  >  Stephen
>  >  >  >  >
>  >  >  >  >
>  >  >  >  >
>  >  >  >  >  On Sat, Apr 12, 2008 at 9:03 AM, Bill Lorensen <bill.lorensen at gmail.com> wrote:
>  >  >  >  >  > Luis,
>  >  >  >  >  >
>  >  >  >  >  >  The changes you made to the multi res registration examples are
>  >  >  >  >  >  producing great results. Looks like we need a second regression image
>  >  >  >  >  >  for the second multi res registration example.
>  >  >  >  >  >
>  >  >  >  >  >  The tests DeformableRegistration15Test1 and
>  >  >  >  >  >  DeformableRegistration15Test2 are failing on all platforms they run
>  >  >  >  >  >  on. Looks like they use the data from BrainWeb (Test1) or Kilian
>  >  >  >  >  >  (Test2).
>  >  >  >  >  >
>  >  >  >  >  >  It's not clear to me what BrainWeb data is required to run the tests.
>  >  >  >  >  >  And I don't think Kilian's data should be in a test checked into ITK
>  >  >  >  >  >  unless we can add his data to the ITK distribution.
>  >  >  >  >  >
>  >  >  >  >  >  Bill
>  >  >  >  >  >  _______________________________________________
>  >  >  >  >  >  Insight-developers mailing list
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>  >  >  >  >  >
>  >  >  >  >
>  >  >  >  >
>  >  >  >  >
>  >  >  >  >  --
>  >  >  >  >  Stephen R. Aylward, Ph.D.
>  >  >  >  >  Chief Medical Scientist
>  >  >  >  >  Kitware, Inc. - Chapel Hill Office
>  >  >  >  >  http://www.kitware.com
>  >  >  >  >  (518) 371-3971 x300
>  >  >  >  >
>  >  >  >
>  >  >
>  >  >
>  >  >
>  >  >  --
>  >  >
>  >  >
>  >  > Stephen R. Aylward, Ph.D.
>  >  >  Chief Medical Scientist
>  >  >  Kitware, Inc. - Chapel Hill Office
>  >  >  http://www.kitware.com
>  >  >  (518) 371-3971 x300
>  >  >
>  >
>  >
>  >
>  >  --
>  >
>  >
>  > Stephen R. Aylward, Ph.D.
>  >  Chief Medical Scientist
>  >  Kitware, Inc. - Chapel Hill Office
>  >  http://www.kitware.com
>  >  (518) 371-3971 x300
>  >
>


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