[ITK] [ITK-dev] ITK 4.7 Release Candidate 2 has been tagged!
David Cole
DLRdave at aol.com
Wed Dec 17 20:46:39 EST 2014
I'm surprised too, after seeing the code you pointed to.... But there it is
right in the CMakeCache.txt as seen in this test result:
https://open.cdash.org/testDetails.php?test=300879476&build=3614855
I'm pretty sure I didn't ask for Debug... If I still have that prompt open
on that machine next time I get to it, I'll double check the command
history. Probably not till Friday.
D
On Wednesday, December 17, 2014, Matt McCormick <matt.mccormick at kitware.com>
wrote:
> Hi Dave,
>
> Thanks for the build and feedback!
>
> I've improve the testing instructions based on your suggestions. There is
> now explicit cmake configuration steps, and a -j flag to ctest. I am
> surprised that you got a Debug build by default -- we try to make it
> Release for a clean build [1].
>
> Thanks,
> Matt
>
> [1]
> http://itk.org/gitweb?p=ITK.git;a=blob;f=CMakeLists.txt;h=a913e4e065239edbf8d89b51969a8a51fc67fb8e;hb=HEAD#l95
>
> On Wed, Dec 17, 2014 at 2:40 PM, David Cole <DLRdave at aol.com
> <javascript:_e(%7B%7D,'cvml','DLRdave at aol.com');>> wrote:
>>
>> I did this build with the VS 2013 compiler, and the Ninja cmake
>> generator, and it basically worked:
>>
>> https://open.cdash.org/buildSummary.php?buildid=3614855
>>
>> The 3 test timeouts I guess are expected because it's a Debug build.
>>
>> I tried to do it by following just the directions in this email to run
>> the dashboard, and there are some things I would add to future emails
>> to make it even easier:
>>
>> - running "ctest" like that works fine for submitting an Experimental
>> dashboard, but: it assumes you've configured an ITK build tree already
>> with CMake... perhaps it should be mentioned that you need to run
>> cmake first
>>
>> - when running CMake, and using make files or Ninja generator, the
>> default build type appears to be Debug -- when configuring, use -D
>> CMAKE_BUILD_TYPE=Release to avoid the long long long test times of a
>> Debug build on Windows
>>
>> - when running ctest, use "-j 4" or "-j 8" or however many processors
>> you can spare to actually run the tests..... My dashboard took over 4
>> hours because it was a Debug build, and I was running the exact
>> command line in the email with ctest, and just simply forgot that when
>> running a dashboard this way, you have to tell ctest how many
>> processes to test at once...
>>
>> Bottom line:
>> 4.7rc02 looks good to me, go for it!
>>
>>
>> Cheers,
>> David C.
>>
>>
>>
>> On Tue, Dec 16, 2014 at 2:42 AM, Matt McCormick
>> <matt.mccormick at kitware.com
>> <javascript:_e(%7B%7D,'cvml','matt.mccormick at kitware.com');>> wrote:
>> > On behalf of the Insight Toolkit community, we are proud to announce
>> that
>> > ITK 4.7.0 release candidate 2 has been tagged and is available for
>> testing!
>> > Please test the release candidate in the coming days for an imminent
>> > release.
>> >
>> >
>> > To obtain the source code,
>> >
>> > git clone http://itk.org/ITK.git
>> > cd ITK
>> > git checkout -q --detach v4.7rc02
>> >
>> > For more details, please see the Git documentation [1].
>> >
>> > A few highlights for this release: all ITK examples from the Software
>> Guide,
>> > Wiki Examples, and SphinxExamples are new indexed and crossed linked in
>> > Doxygen. So now when you go to your favorite filter or other object,
>> say the
>> > ResampleImageFilter, there is a large selection of examples in the
>> examples
>> > sections. This should make it much easier to fine sample code on how to
>> use
>> > an ITK class! TIFF IO has undergone a significant cleanup and speed-up,
>> and
>> > now TIFF tags are read into the MetaDataDictionary. Three new Remote
>> Modules
>> > are available, for gradient computation, DICOM IO, and QuadEdgeMesh
>> > filtering. Python wrapping, CMake configuration, and registration
>> continue
>> > to improve. A new, experimental thread pool is available -- to enable
>> set
>> > the ITK_USE_THREADPOOL or call
>> > itk::MultiThreader::SetGlobalDefaultUseThreadPool(true).
>> >
>> >
>> >
>> > Please test the release candidate and share your experiences on the
>> mailing
>> > list, issue tracker, and Gerrit Code Review. Please help identify issues
>> > submitting an Experimental build to the dashboard [2] with:
>> >
>> > ctest -M Experimental -T Configure -T Build -T Test -T Submit
>> >
>> > and notifying the mailing list. Testing your own applications against
>> the
>> > RC is also appreciated.
>> >
>> >
>> >
>> > Congratulations and well done to the 29 contributors to this release. We
>> > would especially like to recognize the new contributors, Gert Wollny,
>> Girish
>> > Mallya, Christopher Mullins, Umang B, David T. Chen, Danny Perry, Johan
>> > Andruejol, and Ismael Belghiti.
>> >
>> >
>> > The final release is scheduled for December 18th.
>> >
>> > [1] http://www.itk.org/Wiki/ITK/Git
>> >
>> >
>> > [2] http://itk.org/Insight/Doxygen/html/examples.html
>> >
>> >
>> > [3]
>> http://www.itk.org/Doxygen/html/classitk_1_1ResampleImageFilter.html
>> >
>> >
>> > [2] http://open.cdash.org/index.php?project=Insight
>> >
>> >
>> >
>> >
>> > New Features
>> > ------------------
>> >
>> > * Documentation Improvements
>> >
>> > - Update Software Guide registration examples to ITKv4 framework
>> >
>> > - Wiki and Sphinx examples are indexed in Doxygen
>> >
>> > - Clean Software Guide dashboard build
>> >
>> >
>> > * Filtering Improvements
>> >
>> > - New Laplacian deformation filter’s for QuadEdgeMesh’s
>> >
>> > - IJ article: http://hdl.handle.net/10380/3410
>> >
>> > - FFTComplexToComplexImageFilter out of Review, Vnl, FFTW
>> implementations
>> >
>> > - Faster recursive Gaussian on VectorImage
>> >
>> >
>> > * ImageIO improvements
>> >
>> > - PNG sCAL unit support
>> >
>> > - TIFF IO performance greatly improved
>> >
>> > - TIFF tags read into Image MetaDataDictionary
>> >
>> > - MetaIO updated
>> >
>> > - Better support for system GDCM
>> >
>> >
>> > * Infrastructure improvements
>> >
>> > - New method to erase a MetaDataDictionary entry
>> >
>> > - New global method to set physical space tolerance
>> >
>> > - New, experimental thread pool support
>> >
>> > - NumericTraits::Zero and ::One are deprecated in favor of
>> ::ZeroValue()
>> > and ::OneValue()
>> >
>> > - VTK bridge modules only request required VTK modules
>> >
>> >
>> > * New Remote Modules
>> >
>> > - Higher Order Accurate Gradient
>> >
>> > - http://hdl.handle.net/10380/3231
>> >
>> > - IO Transform DCMTK
>> >
>> > - http://hdl.handle.net/10380/3468
>> >
>> > - Subdivision Quad Edge Mesh Filters
>> >
>> > - http://hdl.handle.net/10380/3307
>> >
>> >
>> > * Registration improvements
>> >
>> > - LandmarkBasedTransformInitializer supports BSplineTransform
>> >
>> > - Transverse inverse consistency increased
>> >
>> > - Automatic initialization of the transform center for multi-stage
>> > registrations
>> >
>> > - Sparse point B-spline field estimate
>> >
>> > - Mutual information faster, lower memory usage
>> >
>> >
>> > * Wrapping improvements
>> >
>> > - Wrapping now builds without type warnings
>> >
>> > - pygccxml bumped to 1.6.2
>> >
>> > - Latest GCCXML
>> >
>> > - CMake wrapping infrastructure cleanup
>> >
>> > - Build with Ninja CMake generator
>> >
>> > - New GetTypes() and GetTypesAsList() methods
>> >
>> > - ITK_WRAP_PYTHON is exposed in ITKConfig.cmake
>> >
>> >
>> >
>> > * Many style improvements -- ITK gets more stylish with every release!
>> >
>> >
>> > * Improved code coverage -- we are over 85%!
>> >
>> >
>> > * *Lots* of important bug fixes
>> >
>> >
>> > * And much more! See details in the log below.
>> >
>> >
>> > List of changes since v4.7-rc01
>> >
>> > --------------------------------------
>> >
>> >
>> > Ali Ghayoor (1):
>> > DOC: Revise the registration examples of ITKSoftwareGuide
>> >
>> > Arnaud Gelas (3):
>> > ENH: Adding SubdivisionQuadEdgeMeshFilters to ITK as remote module
>> > COMP: address clang -Winconsistent-missing-override in
>> ITKQuadEdgeMesh
>> > COMP: fix warnings on dashboard for Subdivision remote module
>> >
>> > Bradley Lowekamp (5):
>> > BUG: Fix segfault when setting displacement field as null
>> > BUG: Don't enable SSE rounding with OSX and gccxml
>> > BUG: Add portable access to Tiff field name
>> > BUG: Fix conversion compilation error
>> > BUG: Rename remote module FDFImageIO -> IOFDF
>> >
>> > Christopher Mullins (6):
>> > STYLE: Fix line length in OpenJPEG license for 80 character.
>> > DOC: Finish the ImageLinearIteratorWithIndex example.
>> > DOC: Text and picture problems, book2
>> > BUG: Fix text in margin issues
>> > DOC: Edits for the beginning of chapter 5, Statistics
>> > DOC: Fix empty code block.
>> >
>> > Cory Quammen (1):
>> > COMP: Avoid including VTK_USE_FILE within ITK
>> >
>> > Kent Williams (1):
>> > ENH: Add test to exercise issue with Transform::GetInverse
>> >
>> > Matthew McCormick (7):
>> > BUG: Register AzimuthElevationToCartesianTransform to factories.
>> > DOC: Update texture feature class references.
>> > BUG: Fix texture feature correlation computation for constant
>> image.
>> > STYLE: Put ImageToImageFilterCommon in its own file.
>> > BUG: Wrap ImageToImageFilterCommon.
>> > STYLE: Put ImageSourceCommon in its own file.
>> > COMP: Add missing itkImageRegionSplitterBase to ImageSourceCommon.
>> >
>> > Michka Popoff (1):
>> > ENH: Add CVD and CVF types to VectorIndexSelectionCastImageFilter
>> > wrappings
>> >
>> > Ziv Yaniv (1):
>> > COMP: fixed warnings from gcc4.1.2, made implicit casts explicit
>> >
>> >
>> > List of changes since v4.6.0
>> >
>> > --------------------------------------
>> >
>> >
>> > Alexander Schmidt-Richberg (1):
>> >
>> > ENH: Updated Remote Module VariationalRegistration to new git tag
>> >
>> >
>> > Ali Ghayoor (10):
>> >
>> > ENH: Make ITKv4 compatible with ITKSoftwareGuide
>> >
>> > ENH: Add GetCurrentStepLength to RegularStepGradDescentOptv4
>> >
>> > ENH: Convert three ImageRegistration Examples to ITKv4
>> >
>> > ENH: Add multi-Res and multistage registration Examples to ITKv4
>> >
>> > ENH: Convert DeformableReg examples to ITKv4 reg framework
>> >
>> > BUG: Expand a test to reflect multi-metric registration bug
>> >
>> > BUG: Fix multi metric point sampling bug in
>> ImageRegistrationMethodv4
>> >
>> > ENH: Add direct initialization to SyN registration
>> >
>> > ENH: Direct initialization of SyN by restoring the state
>> >
>> > ENH: LandmarkBasedTransformInitializer supports
>> BSplineTransformType
>> >
>> >
>> > Arnaud Gelas (15):
>> >
>> > COMP: use find_package(VTK COMPONENTS) for LevelSetsv4Visualization
>> >
>> > ENH: Importing Laplacian Deformation for QuadEdgeMesh
>> >
>> > DOC: Add more explanation about SmoothingQuadEdgeMeshFilter's usage
>> >
>> > ENH: SmoothingQuadEdgeMeshFilter::SetCoefficientMethod calls
>> Modified()
>> >
>> > ENH: Add progress report in itk::SmoothingQuadEdgeMeshFilter
>> >
>> > BUG: fix gdcm version in GDCMImageIO.
>> >
>> > COMP: missing cast when calling gdcm::DataElement::SetByteValue
>> >
>> > COMP: missing cast when calling gdcm::DataElement::SetByteValue
>> >
>> > ENH: increase LaplacianDeformation code coverage
>> >
>> > STYLE: use typedef rather than inheritance
>> >
>> > BUG: GDCMImageIO was not working properly when m_KeepOriginalUID is
>> > false
>> >
>> > BUG: split include directories into appropriate cmake variables
>> HDF5
>> >
>> > BUG: missing gdcm libraries when using system GDCM
>> >
>> > DOC: fix doxygen documentaiton for
>> > itk::LaplacianDeformationQuadEdgeMeshFilter
>> >
>> > ENH: Add one method to erase a tag into MetaDataDictionary
>> >
>> >
>> > Bill Lorensen (5):
>> >
>> > ENH: Specify required VTK modules
>> >
>> > COMP: Wiki examples require additional vtk modules
>> >
>> > ENH: Modify WikiExamples remote config
>> >
>> > COMP: Bad test signature
>> >
>> > COMP: Update tag for wiki examples
>> >
>> >
>> > Brad King (6):
>> >
>> > COMP: Fix vxl_config_macros usage of CMake check macros
>> >
>> > ENH: Use if(DEFINED) to simplify conditions
>> >
>> > COMP: Fix vxl_config_macros checks broken by refactoring
>> >
>> > COMP: Fix one more vxl_config_macros check broken by refactoring
>> >
>> > BUG: Fix itk_module_config for repeated calls
>> >
>> > BUG: Fix itk_module_config for repeated calls
>> >
>> >
>> > Bradley Lowekamp (52):
>> >
>> > ENH: Adding License file from upstream MetaIO
>> >
>> > ENH: Adding script to update MetaIO from upstream
>> >
>> > ENH: Remove ITK MetaIO to prepare for upstream import
>> >
>> > PERF: Remove dynamically allocated temporary in evaluate method
>> >
>> > COMP: Fix variable type for Set/Get macros
>> >
>> > BUG: Implement ITK Style Singleton design pattern
>> >
>> > ENH: Add no throw exception specification for UnRegister methods
>> >
>> > COMP: Must specify order as "noexcept override"
>> >
>> > BUG: Add GetInverse for IdentityTransform
>> >
>> > ENH: Adding SetIdentity method to base DisplacementField class
>> >
>> > BUG: Remove unused redefinition of NULL
>> >
>> > BUG: Don't print to std::cout in PrintSelf
>> >
>> > ENH: Prefer the PrintSelfObjectMacro for printing nested objects
>> >
>> > BUG: Use METER of sCAL scale unit
>> >
>> > BUG: Use PNG_SCALE_METER for PNG sCAL unit
>> >
>> > BUG: Use METER of sCAL scale unit
>> >
>> > BUG: Use PNG_SCALE_METER for PNG sCAL unit
>> >
>> > COMP: Fix signed to unsigned int comparison
>> >
>> > BUG: Fix overflows computing size of read tiff image
>> >
>> > ENH: Extract TiffReaderInternal to separate file
>> >
>> > ENH: Refactor ReadTwoSamplePerPixelImage into template function
>> >
>> > ENH: Refactor GenericReadImage into template function
>> >
>> > BUG: Remove Zeiss 2-channel support code in TIFFImageIO ( and
>> > LSMImageIO )
>> >
>> > ENH: Refactor method to convert RGBA image to output buffer
>> >
>> > ENH: Refactor duplicated code to read a page
>> >
>> > BUG: Fix right oriented tiff images
>> >
>> > BUG: Remove dead separated plannar code, add test
>> >
>> > STYLE: Fix minor kwstyle defects in test and test results
>> >
>> > BUG: Use array delete operator for array new allocations
>> >
>> > ENH: add arbitrary TIFF TAGs to meta-data dictionary
>> >
>> > ENH: Reduce code duplicate in TIFFImageIO::ReadCurrentPage
>> >
>> > BUG: Address Coverity warning about null pointer dereferences
>> >
>> > ENH: Remove support for TIFF tile as 3D and dead code
>> >
>> > ENH: RGBA read images should stay unchanged.
>> >
>> > BUG: Override method to MakeOutput by name
>> >
>> > ENH: Refactor per pixel conversion function to per scan-line method
>> >
>> > PERF: Refactor color table lookup
>> >
>> > BUG: Adding missing parentheses around boolean expression
>> >
>> > ENH: adding TIFFImageIO test for RGB palette images
>> >
>> > PERF: Improve recursive Gaussian perfromance with VectorImages
>> >
>> > ENH: Query libtiff to determine compression support
>> >
>> > BUG: Support TIFF tiled image with TIFFReadRGBAImage
>> >
>> > BUG: Use SizeValueType for length of scanline
>> >
>> > PERF: Store causal results directly in output buffers
>> >
>> > COMP: Add explicit conversion to const char
>> >
>> > COMP: Explicitly add override to GetNameOfClass method
>> >
>> > COMP: Address internal segmentation fault with Intel compiler
>> >
>> > ENH: Adding method to set global physical space tolerance
>> >
>> > COMP: Explicitly add override to GetNameOfClass method
>> >
>> > BUG: Add new TypeMacro for non-overloaded classes
>> >
>> > BUG: Fix obscure race condition on access thread pool
>> initialization
>> >
>> > BUG: Updating FDFImageIO remote module
>> >
>> >
>> > Christopher Mullins (15):
>> >
>> > COMP: Allows latex to compile for ITKSoftwareGuide
>> >
>> > COMP: Allows latex to compile for ITKSoftwareGuide
>> >
>> > COMP: Wrap MeshBase templates
>> >
>> > COMP: Wrap MeshBase templates
>> >
>> > COMP: Fix warning in BlockMatchingImageFilter
>> >
>> > STYLE: Line lengths in examples should be no longer than 80 chars.
>> >
>> > COMP: Wrap the remaining MeshBase and MeshToMeshFilter types.
>> >
>> > COMP: Fix LaTeX warnings.
>> >
>> > STYLE: Fix formatting/punctuation errors.
>> >
>> > STYLE: Formatting and punctuation fixes.
>> >
>> > DOC: Edits for Book 2 Chapter 1 documentation in the Examples.
>> >
>> > DOC: Edits for book 2 chapter 2.
>> >
>> > DOC: More chapter 2 edits
>> >
>> > DOC: Book 2 Chapter 3 edits (part 1)
>> >
>> > DOC: book 2 chapter 4 Segmentation edits
>> >
>> >
>> > Danny Perry (2):
>> >
>> > BUG: adding test for vnl_sparse_matrix::mult()
>> >
>> > BUG: size of q buffer should actually be (this->rows())*pcols.
>> >
>> >
>> > David T. Chen (1):
>> >
>> > DOC: Fixed HistogramThresholdImageFitler
>> >
>> >
>> > Dirk Padfield (1):
>> >
>> > BUG: Corrected processing of last sigma
>> >
>> >
>> > GCC-XML Upstream (1):
>> >
>> > ENH: pygccxml v1.6.2 (reduced)
>> >
>> >
>> > Gert Wollny (1):
>> >
>> > COMP: Fix SSE2 build errors with WrapITK on GCC 4.9. (ForRelease)
>> >
>> >
>> > Girish Mallya (1):
>> >
>> > BUG: Tests added for BinaryImageToLabelMapFilter for single-row
>> images.
>> >
>> >
>> > Hans Johnson (24):
>> >
>> > COMP: Add tolerance for comparing floating point
>> >
>> > PERF: Remove non-threadable algorithm components
>> >
>> > COMP: Add tolerance for comparing floating point
>> >
>> > PERF: Remove non-threadable algorithm components
>> >
>> > PERF: Remove large foot print of PDF derivatives.
>> >
>> > PERF: Revert Remove large foot print of PDF derivatives.
>> >
>> > STYLE: Test against almost equal for floating point values
>> >
>> > STYLE: Non-exact floating point testing
>> >
>> > PERF: Distribute initialization per thread buffers
>> >
>> > ENH: Remove unnecessary mutable qualifier.
>> >
>> > STYLE: Remove comment with no meaning.
>> >
>> > ENH: Moved accumlator logic to main MI class
>> >
>> > ENH: Allow staggering of accumulations per thread.
>> >
>> > PERF: Zero reset thread buffers during finalize
>> >
>> > BUG: Syntax error in comment
>> >
>> > PERF: Add non-blocking mutex locking.
>> >
>> > ENH: Use TryLock minimize thread stalls
>> >
>> > BUG: ThreadedIndexedContainerPartitioner is inclusive
>> >
>> > STYLE: Remove include_regular_expression from Examples
>> >
>> > BUG: Demonstrate Inv(Inv(T)) != T
>> >
>> > BUG: Ensure Inv(Inv(T)) == T for transforms
>> >
>> > COMP: Valgrind detects uninitialized memory read
>> >
>> > COMP: Missing required base class API component
>> >
>> > ENH: Expand interface for selecting threadpool
>> >
>> >
>> > Ismael Belghiti (1):
>> >
>> > DOC: Spelling Error in PatchBasedDenoisingBaseImageFilter
>> >
>> >
>> > Jim Miller (1):
>> >
>> > STYLE: Removing what appears to be a temporary file
>> >
>> >
>> > Johan Andruejol (1):
>> >
>> > ENH: Fix normalization for null vectors and return the norm
>> >
>> >
>> > Jon Haitz Legarreta (1):
>> >
>> > ENH: New test for itkLabelShapeOpeningImageFilter
>> >
>> >
>> > Kent Williams (9):
>> >
>> > COMP: use find_package(VTK COMPONENTS) to specify just needed VTK
>> > Components
>> >
>> > BUG: ImageSources/test/CMakeLists.txt incorrect library var
>> reference
>> >
>> > COMP: Fix coverity defects related to RegistrationV4 examples
>> >
>> > COMP: silence warning of vnl_vector_fixed_ref::assert_size
>> >
>> > COMP: Fix various Coverity warnings
>> >
>> > COMP: Fix a typo in an error message print statement.
>> >
>> > COMP: itk::Command-derived class used pointless dynamic_cast.
>> >
>> > PERF: Don't recompute InternalInverse repeatedly
>> >
>> > COMP: Correct orientation/spacing for Philips MultiFrame
>> >
>> >
>> > Mark Hiner (2):
>> >
>> > ENH: Update SCIFIO remote module hash
>> >
>> > BUG: Fix duplicate variables in Windows
>> >
>> >
>> > Matthew McCormick (105):
>> >
>> > DOC: Fix itkSetGetDecoratedInputMacro Doxygen macro.
>> >
>> > ENH: Move FFTComplexToComplexImageFilter out of Review.
>> >
>> > ENH: Add VnlComplexToComplexFFTImageFilter.
>> >
>> > BUG: Use fixed seed for Vnl FFT tests for repeatibility.
>> >
>> > ENH: Bump CMakeLists.txt version to 4.7.0.
>> >
>> > BUG: ArchiveTestingData.py future imports must occur at the
>> beginning.
>> >
>> > BUG: Do not run vnl_test_na with broken libc++.
>> >
>> > DOC: Remove Image2.cxx reference from Book 2.
>> >
>> > DOC: Fix Software Guide page overruns in
>> IterativeClosestPoint3.cxx.
>> >
>> > DOC: Remove references to Book 1 sections from Book 2.
>> >
>> > DOC: Make BinaryThresholdImageFilter not floating.
>> >
>> > DOC: Fix Software Guide figure caption for FlipImageFilter.
>> >
>> > DOC: Avoid duplicate figure description in
>> ResampleImageFilter2.cxx.
>> >
>> > DOC: Remove duplicate figure in
>> > LaplacianRecursiveGaussianImageFilter2.cxx.
>> >
>> > DOC: ImageRandomConstIteratorWithIndex table reference.
>> >
>> > DOC: Fix Software Guide page overruns in
>> > IterativeClosestPoint{1,2}.cxx.
>> >
>> > DOC: Remove duplicate text in LaplacianRecursiveGaussian example.
>> >
>> > BUG: Uninitialized m_TransformDirection in
>> > ComplexToComplexFFTImageFilter.
>> >
>> > BUG: Fix offset[2] in
>> PointSetToSpatialObjectDemonsRegistrationTest.
>> >
>> > STYLE: Fix style in VoronoiDiagram2D.
>> >
>> > BUG: Fix invalid assignment of second VoronoiBoundaryOrigin.
>> >
>> > BUG: Bump GCCXML to 2014-08-06.
>> >
>> > BUG: Remove unused m_{SplitEpsilon,SigmoidPrimeOffset}.
>> >
>> > BUG: Fix Win MultiThreader check for successful process creation.
>> >
>> > BUG: Fix VTKPolyDataMeshIO writing for 2D second rank tensor.
>> >
>> > COMP: Fix ImageRegistration8RegisteredSlice.png baseline name.
>> >
>> > DOC: itk::statistics -> itk::Statistics.
>> >
>> > COMP: Fix transform type for ITKv3/IterativeClosestPoint2.
>> >
>> > BUG: Fix invalid assignment of second VoronoiBoundaryOrigin.
>> >
>> > COMP: Improve const correctness of
>> > GradientRecursiveGaussianImageFilter.
>> >
>> > BUG: Call clear instead of empty on PatchBasedDenoising
>> EmptyCaches().
>> >
>> > BUG: Fix Size() in ImageToListSampleAdaptor for VectorImage's.
>> >
>> > COMP: ThreadJob NULL not defined.
>> >
>> > BUG: Fix alpha assignment for RGBA TIFF.
>> >
>> > COMP: Remove unused typedefs in LevelSetsv4Visualization.
>> >
>> > COMP: Remove unused typedef's in VtkGlue.
>> >
>> > ENH: Mark BSplineWarping2Test as RUNS_LONG.
>> >
>> > BUG: Fix Nifti IO read with large images.
>> >
>> > COMP: Remove call for non-existent variable in Nifti debugging.
>> >
>> > BUG: Close the file on Read and Write in HDF5TransformIO.
>> >
>> > BUG: Remove InsightLegacy test code from TransformHDF5Test.
>> >
>> > ENH: Add {Set,Get}TransformIO for TransformFile{Reader,Writer}.
>> >
>> > STYLE: Use SeriesUIDContainerType and FileNamesContainerType
>> >
>> > ENH: Allow specification of orthogonality tolerance in rigid
>> > transforms.
>> >
>> > BUG: TransformFileReader does not clear its TransformList.
>> >
>> > BUG: Prevent dangling pointer in HDF5TransformIO.
>> >
>> > COMP: Do not use _stat64 with MinGW-32.
>> >
>> > BUG: Improve thread-safety and performance of
>> > PCAShapeSignedDistanceFunction.
>> >
>> > DOC: itk::statistics -> itk::Statistics.
>> >
>> > DOC: Remove duplicate text in LaplacianRecursiveGaussian example.
>> >
>> > DOC: Fix Software Guide page overruns in
>> > IterativeClosestPoint{1,2}.cxx.
>> >
>> > COMP: Address LaplacianDeformation Doxygen warnings.
>> >
>> > BUG: TransformFileReader does not clear its TransformList.
>> >
>> > BUG: Prevent dangling pointer in HDF5TransformIO.
>> >
>> > COMP: Fix missing prefix in ITKv3ImageRegistration20Test.
>> >
>> > BUG: Do not return SmartPointers in
>> TimeVaryingVelocityFieldTransform
>> >
>> > COMP: Do not wrap the FixedArray of Image SmartPointer's.
>> >
>> > COMP: Add missing wrapping for TransformIOBaseTemplate.
>> >
>> > COMP: Mark DeformableRegistration6Test as RUNS_LONG.
>> >
>> > STYLE: Improve style in BinaryImageToLabelMapFilter.
>> >
>> > BUG: Fix BinaryImageToLabelMapFilter on 1D image.
>> >
>> > ENH: Improve precision of the joint PDF sum
>> >
>> > BUG: Fix BinShrinkImageFilter for different input/output image
>> types.
>> >
>> > COMP: Fix transform type for ITKv3/IterativeClosestPoint2.
>> >
>> > BUG: Use -py3 when building wrapping for Python 3.
>> >
>> > COMP: Add missing wrapping for TransformIOBaseTemplate.
>> >
>> > DOC: Improve ImageRegistration4 grammar.
>> >
>> > ENH: Add IOTransformDCMTK Remote module.
>> >
>> > BUG: gdcm::StringFilter recognizes backslash delimiter.
>> >
>> > DOC: Add migration guide for GDCM Rescale slope intercept apply on
>> > write.
>> >
>> > COMP: Remove unused typedef's in GPU code.
>> >
>> > STYLE: Improve style of HoughTransform2DLinesImageFilter example.
>> >
>> > COMP: Use ConceptChecking for IterativeInverse dimension check.
>> >
>> > COMP: Wrap TransformIOBaseTemplate for const SmartPointer.
>> >
>> > COMP: Add warning exceptions for third party pcre, swig, gccxml.
>> >
>> > ENH: Bump ITK version to 4.6.1.
>> >
>> > BUG: Add missing ITK_OVERRIDE to ITKImageeSources module.
>> >
>> > BUG: Remove GaussianImageSource members shadowing
>> GenerateImageSource.
>> >
>> > STYLE: Style fixes to ITKImageSources module.
>> >
>> > BUG: GaussianSpatialFunction and GaborImageSource use
>> > SpacePrecisionType.
>> >
>> > BUG: Do not perform itk_download_attempt_check when not building
>> ITK.
>> >
>> > DOC: Update GDCMImageIO rescale slope intercept doc.
>> >
>> > BUG: Only register requestion IO COMPONENT modules.
>> >
>> > BUG: Fix wrapping .i, .idx CMake dependencies.
>> >
>> > COMP: Add VTK Python module when wrapping ITKVtkGlue.
>> >
>> > STYLE: Remove NULL definition in itkVoronoiDiagram2DGenerator.
>> >
>> > STYLE: VoronoiDiagram2DGenerator defines a VoronoiDiagramType
>> typedef.
>> >
>> > COMP: Add missing VTK module dependency for
>> LevelSetsv4Visualization.
>> >
>> > BUG: By default, do not create any fixed parameters.
>> >
>> > STYLE: Remove trivial method comments in itkTransform.hxx.
>> >
>> > BUG: PolylineMask Filter's GenerateData is protected / virtual.
>> >
>> > ENH: Add HigherOrderAccurateGradient Module.
>> >
>> > BUG: Use input RequestedRegion Index in SliceBySliceImageFilter
>> > internal.
>> >
>> > COMP: Remove extra semi-colon, variable scope in DCMTKFileReader.
>> >
>> > STYLE: Style fixes for Transform classes.
>> >
>> > DOC: Increase Doxygen LOOKUP_CACHE_SIZE.
>> >
>> > BUG: MatrixOffsetTransformBase::GetFixedParameters not thread safe.
>> >
>> > DOC: Index Wiki examples with Doxygen.
>> >
>> > COMP: Bump SphinxExamples remote module.
>> >
>> > DOC: Index Sphinx examples in Doxygen.
>> >
>> > COMP: Remove old java examples.
>> >
>> > COMP: Remove duplicate DiffusionTensor3DReconstruction example
>> > reference.
>> >
>> > COMP: Address GradientAnisotropicDiffusionImageFilter example
>> settings.
>> >
>> > COMP: Bump Sphinx Examples remote.
>> >
>> > COMP: Bump WikiExamples remote.
>> >
>> >
>> > MetaIO Maintainers (1):
>> >
>> > MetaIO (reduced)
>> >
>> >
>> > Michka Popoff (40):
>> >
>> > ENH: Fixes for python 3 support
>> >
>> > BUG: Add VTK_VERSION for older VTK versions
>> >
>> > BUG: Improve SWIG version check
>> >
>> > COMP: Add wrapping for ThreadPool and ThreadJob
>> >
>> > COMP: Remove unimplemented DestroyPool method
>> >
>> > COMP: Fix itkVnlComplexToComplexFFTImageFilter wrapping
>> >
>> > COMP: Do not hide pygccxml warnings
>> >
>> > ENH: Update links in readme file
>> >
>> > BUG: Improve SWIG version check
>> >
>> > BUG: Add VTK_VERSION for older VTK versions
>> >
>> > STYLE: Remove trailing whitespaces
>> >
>> > STYLE: Set ITK_USE_SYTEM_ZLIB and ITK_USE_SYTEM_SZIP
>> >
>> > BUG: Fix memory leak in MetaImageIO after exception
>> >
>> > ENH: Add script to update pygccxml from upstream
>> >
>> > BUG: Update VTK minimum version (for release)
>> >
>> > BUG: Fix memory leak in MetaImageIO after exception
>> >
>> > ENH: Remove Sun OS compatibility for the wrappings
>> >
>> > COMP: Fix for conversion to non-pointer like type warning
>> >
>> > STYLE: LabelObject style
>> >
>> > DOC: Remove broken link from LabelObject class description
>> >
>> > ENH: Do not setup the python tests if not asked
>> >
>> > ENH: Add new GetTypes() and GetTypesAsList() methods to the
>> template
>> > class
>> >
>> > COMP: Fix CMP0054 warnings in wrappings
>> >
>> > STYLE: Remove old cmake < 2.8.4 specific code
>> >
>> > STYLE: Remove old cmake < 2.8.5 specific code
>> >
>> > ENH: Update to PCRE 8.36
>> >
>> > COMP: Refactor Wrapping setup and fix legacy warnings
>> >
>> > ENH: Add wrapping configuration to ITKConfig.cmake
>> >
>> > STYLE: Some minor code cleanup in the wrapping setup
>> >
>> > DOC: Fix typo in RelabelComponentImageFilter
>> >
>> > ENH: Deprecate VectorResampleImageFilter
>> >
>> > DOC: Add migration guide for ::Zero and ::One
>> >
>> > ENH: Deprecate ::Zero and ::One
>> >
>> > ENH: Add option to disable sorting by size in
>> > itkRelabelComponentImageFilter
>> >
>> > ENH: Add Vector and RGB wrapping to linear interpolator
>> >
>> > STYLE: Remove SORT macro in wrappings
>> >
>> > COMP: Fix warning for InterpolateImageFunction wrapping
>> >
>> > COMP: Add a check for Blocks in GPU module
>> >
>> > COMP: Bump SCIFIO to fix test build warnings
>> >
>> > COMP: Fix wrapping of itkImageFunctionBase
>> >
>> >
>> > Nick Tustison (7):
>> >
>> > BUG: Need to explicitly specify spline order.
>> >
>> > ENH: Initializing the transform center.
>> >
>> > BUG: Need to check the dynamic cast before any calls.
>> >
>> > ENH: Adding modifications for point set metrics.
>> >
>> > BUG: Need to specify TInternalComputationValueType for default
>> metric.
>> >
>> > ENH: Adding sparse points to B-spline field estimate.
>> >
>> > BUG: Uninitialized variables.
>> >
>> >
>> > Richard Beare (1):
>> >
>> > ENH: Include TIFF tags in the MetaDataDictionary
>> >
>> >
>> > Taylor Braun-Jones (1):
>> >
>> > BUG: Fix SliceBySliceImageFilter doesn't propagate information
>> > internally
>> >
>> >
>> > Umang B (1):
>> >
>> > ENH: Use thread pool to dispatch multithreading tasks
>> >
>> >
>> > Vivien Delmon (2):
>> >
>> > BUG: ExtractImageFilter::CollapseToSubMatrix fix
>> >
>> > ENH: Add a test on extracted directions in CollapseToSubMatrix mode
>> >
>> >
>> > Vladimir S. FONOV (1):
>> >
>> > BUG: Fixing incorrect MINC style inverse transform
>> >
>> >
>> >
>> > -----------------------------------------------------
>> >
>> > Errors or omissions? Please fix them here:
>> >
>> >
>> >
>> https://docs.google.com/document/d/1V0zNgFrm_GyF1jOC00fMq-7VBXk4hHmHL62qByfeKP4/edit?usp=sharing
>> >
>> >
>> >
>> >
>> > _______________________________________________
>> > Powered by www.kitware.com
>> >
>> > Visit other Kitware open-source projects at
>> > http://www.kitware.com/opensource/opensource.html
>> >
>> > Kitware offers ITK Training Courses, for more information visit:
>> > http://kitware.com/products/protraining.php
>> >
>> > Please keep messages on-topic and check the ITK FAQ at:
>> > http://www.itk.org/Wiki/ITK_FAQ
>> >
>> > Follow this link to subscribe/unsubscribe:
>> > http://public.kitware.com/mailman/listinfo/insight-developers
>> >
>>
>
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