[ITK] [ITK-dev] ITK 4.7 Release Candidate 2 has been tagged!
Matt McCormick
matt.mccormick at kitware.com
Wed Dec 17 15:34:56 EST 2014
Hi Dave,
Thanks for the build and feedback!
I've improve the testing instructions based on your suggestions. There is
now explicit cmake configuration steps, and a -j flag to ctest. I am
surprised that you got a Debug build by default -- we try to make it
Release for a clean build [1].
Thanks,
Matt
[1]
http://itk.org/gitweb?p=ITK.git;a=blob;f=CMakeLists.txt;h=a913e4e065239edbf8d89b51969a8a51fc67fb8e;hb=HEAD#l95
On Wed, Dec 17, 2014 at 2:40 PM, David Cole <DLRdave at aol.com> wrote:
>
> I did this build with the VS 2013 compiler, and the Ninja cmake
> generator, and it basically worked:
>
> https://open.cdash.org/buildSummary.php?buildid=3614855
>
> The 3 test timeouts I guess are expected because it's a Debug build.
>
> I tried to do it by following just the directions in this email to run
> the dashboard, and there are some things I would add to future emails
> to make it even easier:
>
> - running "ctest" like that works fine for submitting an Experimental
> dashboard, but: it assumes you've configured an ITK build tree already
> with CMake... perhaps it should be mentioned that you need to run
> cmake first
>
> - when running CMake, and using make files or Ninja generator, the
> default build type appears to be Debug -- when configuring, use -D
> CMAKE_BUILD_TYPE=Release to avoid the long long long test times of a
> Debug build on Windows
>
> - when running ctest, use "-j 4" or "-j 8" or however many processors
> you can spare to actually run the tests..... My dashboard took over 4
> hours because it was a Debug build, and I was running the exact
> command line in the email with ctest, and just simply forgot that when
> running a dashboard this way, you have to tell ctest how many
> processes to test at once...
>
> Bottom line:
> 4.7rc02 looks good to me, go for it!
>
>
> Cheers,
> David C.
>
>
>
> On Tue, Dec 16, 2014 at 2:42 AM, Matt McCormick
> <matt.mccormick at kitware.com> wrote:
> > On behalf of the Insight Toolkit community, we are proud to announce that
> > ITK 4.7.0 release candidate 2 has been tagged and is available for
> testing!
> > Please test the release candidate in the coming days for an imminent
> > release.
> >
> >
> > To obtain the source code,
> >
> > git clone http://itk.org/ITK.git
> > cd ITK
> > git checkout -q --detach v4.7rc02
> >
> > For more details, please see the Git documentation [1].
> >
> > A few highlights for this release: all ITK examples from the Software
> Guide,
> > Wiki Examples, and SphinxExamples are new indexed and crossed linked in
> > Doxygen. So now when you go to your favorite filter or other object, say
> the
> > ResampleImageFilter, there is a large selection of examples in the
> examples
> > sections. This should make it much easier to fine sample code on how to
> use
> > an ITK class! TIFF IO has undergone a significant cleanup and speed-up,
> and
> > now TIFF tags are read into the MetaDataDictionary. Three new Remote
> Modules
> > are available, for gradient computation, DICOM IO, and QuadEdgeMesh
> > filtering. Python wrapping, CMake configuration, and registration
> continue
> > to improve. A new, experimental thread pool is available -- to enable set
> > the ITK_USE_THREADPOOL or call
> > itk::MultiThreader::SetGlobalDefaultUseThreadPool(true).
> >
> >
> >
> > Please test the release candidate and share your experiences on the
> mailing
> > list, issue tracker, and Gerrit Code Review. Please help identify issues
> > submitting an Experimental build to the dashboard [2] with:
> >
> > ctest -M Experimental -T Configure -T Build -T Test -T Submit
> >
> > and notifying the mailing list. Testing your own applications against
> the
> > RC is also appreciated.
> >
> >
> >
> > Congratulations and well done to the 29 contributors to this release. We
> > would especially like to recognize the new contributors, Gert Wollny,
> Girish
> > Mallya, Christopher Mullins, Umang B, David T. Chen, Danny Perry, Johan
> > Andruejol, and Ismael Belghiti.
> >
> >
> > The final release is scheduled for December 18th.
> >
> > [1] http://www.itk.org/Wiki/ITK/Git
> >
> >
> > [2] http://itk.org/Insight/Doxygen/html/examples.html
> >
> >
> > [3] http://www.itk.org/Doxygen/html/classitk_1_1ResampleImageFilter.html
> >
> >
> > [2] http://open.cdash.org/index.php?project=Insight
> >
> >
> >
> >
> > New Features
> > ------------------
> >
> > * Documentation Improvements
> >
> > - Update Software Guide registration examples to ITKv4 framework
> >
> > - Wiki and Sphinx examples are indexed in Doxygen
> >
> > - Clean Software Guide dashboard build
> >
> >
> > * Filtering Improvements
> >
> > - New Laplacian deformation filter’s for QuadEdgeMesh’s
> >
> > - IJ article: http://hdl.handle.net/10380/3410
> >
> > - FFTComplexToComplexImageFilter out of Review, Vnl, FFTW implementations
> >
> > - Faster recursive Gaussian on VectorImage
> >
> >
> > * ImageIO improvements
> >
> > - PNG sCAL unit support
> >
> > - TIFF IO performance greatly improved
> >
> > - TIFF tags read into Image MetaDataDictionary
> >
> > - MetaIO updated
> >
> > - Better support for system GDCM
> >
> >
> > * Infrastructure improvements
> >
> > - New method to erase a MetaDataDictionary entry
> >
> > - New global method to set physical space tolerance
> >
> > - New, experimental thread pool support
> >
> > - NumericTraits::Zero and ::One are deprecated in favor of ::ZeroValue()
> > and ::OneValue()
> >
> > - VTK bridge modules only request required VTK modules
> >
> >
> > * New Remote Modules
> >
> > - Higher Order Accurate Gradient
> >
> > - http://hdl.handle.net/10380/3231
> >
> > - IO Transform DCMTK
> >
> > - http://hdl.handle.net/10380/3468
> >
> > - Subdivision Quad Edge Mesh Filters
> >
> > - http://hdl.handle.net/10380/3307
> >
> >
> > * Registration improvements
> >
> > - LandmarkBasedTransformInitializer supports BSplineTransform
> >
> > - Transverse inverse consistency increased
> >
> > - Automatic initialization of the transform center for multi-stage
> > registrations
> >
> > - Sparse point B-spline field estimate
> >
> > - Mutual information faster, lower memory usage
> >
> >
> > * Wrapping improvements
> >
> > - Wrapping now builds without type warnings
> >
> > - pygccxml bumped to 1.6.2
> >
> > - Latest GCCXML
> >
> > - CMake wrapping infrastructure cleanup
> >
> > - Build with Ninja CMake generator
> >
> > - New GetTypes() and GetTypesAsList() methods
> >
> > - ITK_WRAP_PYTHON is exposed in ITKConfig.cmake
> >
> >
> >
> > * Many style improvements -- ITK gets more stylish with every release!
> >
> >
> > * Improved code coverage -- we are over 85%!
> >
> >
> > * *Lots* of important bug fixes
> >
> >
> > * And much more! See details in the log below.
> >
> >
> > List of changes since v4.7-rc01
> >
> > --------------------------------------
> >
> >
> > Ali Ghayoor (1):
> > DOC: Revise the registration examples of ITKSoftwareGuide
> >
> > Arnaud Gelas (3):
> > ENH: Adding SubdivisionQuadEdgeMeshFilters to ITK as remote module
> > COMP: address clang -Winconsistent-missing-override in
> ITKQuadEdgeMesh
> > COMP: fix warnings on dashboard for Subdivision remote module
> >
> > Bradley Lowekamp (5):
> > BUG: Fix segfault when setting displacement field as null
> > BUG: Don't enable SSE rounding with OSX and gccxml
> > BUG: Add portable access to Tiff field name
> > BUG: Fix conversion compilation error
> > BUG: Rename remote module FDFImageIO -> IOFDF
> >
> > Christopher Mullins (6):
> > STYLE: Fix line length in OpenJPEG license for 80 character.
> > DOC: Finish the ImageLinearIteratorWithIndex example.
> > DOC: Text and picture problems, book2
> > BUG: Fix text in margin issues
> > DOC: Edits for the beginning of chapter 5, Statistics
> > DOC: Fix empty code block.
> >
> > Cory Quammen (1):
> > COMP: Avoid including VTK_USE_FILE within ITK
> >
> > Kent Williams (1):
> > ENH: Add test to exercise issue with Transform::GetInverse
> >
> > Matthew McCormick (7):
> > BUG: Register AzimuthElevationToCartesianTransform to factories.
> > DOC: Update texture feature class references.
> > BUG: Fix texture feature correlation computation for constant image.
> > STYLE: Put ImageToImageFilterCommon in its own file.
> > BUG: Wrap ImageToImageFilterCommon.
> > STYLE: Put ImageSourceCommon in its own file.
> > COMP: Add missing itkImageRegionSplitterBase to ImageSourceCommon.
> >
> > Michka Popoff (1):
> > ENH: Add CVD and CVF types to VectorIndexSelectionCastImageFilter
> > wrappings
> >
> > Ziv Yaniv (1):
> > COMP: fixed warnings from gcc4.1.2, made implicit casts explicit
> >
> >
> > List of changes since v4.6.0
> >
> > --------------------------------------
> >
> >
> > Alexander Schmidt-Richberg (1):
> >
> > ENH: Updated Remote Module VariationalRegistration to new git tag
> >
> >
> > Ali Ghayoor (10):
> >
> > ENH: Make ITKv4 compatible with ITKSoftwareGuide
> >
> > ENH: Add GetCurrentStepLength to RegularStepGradDescentOptv4
> >
> > ENH: Convert three ImageRegistration Examples to ITKv4
> >
> > ENH: Add multi-Res and multistage registration Examples to ITKv4
> >
> > ENH: Convert DeformableReg examples to ITKv4 reg framework
> >
> > BUG: Expand a test to reflect multi-metric registration bug
> >
> > BUG: Fix multi metric point sampling bug in
> ImageRegistrationMethodv4
> >
> > ENH: Add direct initialization to SyN registration
> >
> > ENH: Direct initialization of SyN by restoring the state
> >
> > ENH: LandmarkBasedTransformInitializer supports BSplineTransformType
> >
> >
> > Arnaud Gelas (15):
> >
> > COMP: use find_package(VTK COMPONENTS) for LevelSetsv4Visualization
> >
> > ENH: Importing Laplacian Deformation for QuadEdgeMesh
> >
> > DOC: Add more explanation about SmoothingQuadEdgeMeshFilter's usage
> >
> > ENH: SmoothingQuadEdgeMeshFilter::SetCoefficientMethod calls
> Modified()
> >
> > ENH: Add progress report in itk::SmoothingQuadEdgeMeshFilter
> >
> > BUG: fix gdcm version in GDCMImageIO.
> >
> > COMP: missing cast when calling gdcm::DataElement::SetByteValue
> >
> > COMP: missing cast when calling gdcm::DataElement::SetByteValue
> >
> > ENH: increase LaplacianDeformation code coverage
> >
> > STYLE: use typedef rather than inheritance
> >
> > BUG: GDCMImageIO was not working properly when m_KeepOriginalUID is
> > false
> >
> > BUG: split include directories into appropriate cmake variables HDF5
> >
> > BUG: missing gdcm libraries when using system GDCM
> >
> > DOC: fix doxygen documentaiton for
> > itk::LaplacianDeformationQuadEdgeMeshFilter
> >
> > ENH: Add one method to erase a tag into MetaDataDictionary
> >
> >
> > Bill Lorensen (5):
> >
> > ENH: Specify required VTK modules
> >
> > COMP: Wiki examples require additional vtk modules
> >
> > ENH: Modify WikiExamples remote config
> >
> > COMP: Bad test signature
> >
> > COMP: Update tag for wiki examples
> >
> >
> > Brad King (6):
> >
> > COMP: Fix vxl_config_macros usage of CMake check macros
> >
> > ENH: Use if(DEFINED) to simplify conditions
> >
> > COMP: Fix vxl_config_macros checks broken by refactoring
> >
> > COMP: Fix one more vxl_config_macros check broken by refactoring
> >
> > BUG: Fix itk_module_config for repeated calls
> >
> > BUG: Fix itk_module_config for repeated calls
> >
> >
> > Bradley Lowekamp (52):
> >
> > ENH: Adding License file from upstream MetaIO
> >
> > ENH: Adding script to update MetaIO from upstream
> >
> > ENH: Remove ITK MetaIO to prepare for upstream import
> >
> > PERF: Remove dynamically allocated temporary in evaluate method
> >
> > COMP: Fix variable type for Set/Get macros
> >
> > BUG: Implement ITK Style Singleton design pattern
> >
> > ENH: Add no throw exception specification for UnRegister methods
> >
> > COMP: Must specify order as "noexcept override"
> >
> > BUG: Add GetInverse for IdentityTransform
> >
> > ENH: Adding SetIdentity method to base DisplacementField class
> >
> > BUG: Remove unused redefinition of NULL
> >
> > BUG: Don't print to std::cout in PrintSelf
> >
> > ENH: Prefer the PrintSelfObjectMacro for printing nested objects
> >
> > BUG: Use METER of sCAL scale unit
> >
> > BUG: Use PNG_SCALE_METER for PNG sCAL unit
> >
> > BUG: Use METER of sCAL scale unit
> >
> > BUG: Use PNG_SCALE_METER for PNG sCAL unit
> >
> > COMP: Fix signed to unsigned int comparison
> >
> > BUG: Fix overflows computing size of read tiff image
> >
> > ENH: Extract TiffReaderInternal to separate file
> >
> > ENH: Refactor ReadTwoSamplePerPixelImage into template function
> >
> > ENH: Refactor GenericReadImage into template function
> >
> > BUG: Remove Zeiss 2-channel support code in TIFFImageIO ( and
> > LSMImageIO )
> >
> > ENH: Refactor method to convert RGBA image to output buffer
> >
> > ENH: Refactor duplicated code to read a page
> >
> > BUG: Fix right oriented tiff images
> >
> > BUG: Remove dead separated plannar code, add test
> >
> > STYLE: Fix minor kwstyle defects in test and test results
> >
> > BUG: Use array delete operator for array new allocations
> >
> > ENH: add arbitrary TIFF TAGs to meta-data dictionary
> >
> > ENH: Reduce code duplicate in TIFFImageIO::ReadCurrentPage
> >
> > BUG: Address Coverity warning about null pointer dereferences
> >
> > ENH: Remove support for TIFF tile as 3D and dead code
> >
> > ENH: RGBA read images should stay unchanged.
> >
> > BUG: Override method to MakeOutput by name
> >
> > ENH: Refactor per pixel conversion function to per scan-line method
> >
> > PERF: Refactor color table lookup
> >
> > BUG: Adding missing parentheses around boolean expression
> >
> > ENH: adding TIFFImageIO test for RGB palette images
> >
> > PERF: Improve recursive Gaussian perfromance with VectorImages
> >
> > ENH: Query libtiff to determine compression support
> >
> > BUG: Support TIFF tiled image with TIFFReadRGBAImage
> >
> > BUG: Use SizeValueType for length of scanline
> >
> > PERF: Store causal results directly in output buffers
> >
> > COMP: Add explicit conversion to const char
> >
> > COMP: Explicitly add override to GetNameOfClass method
> >
> > COMP: Address internal segmentation fault with Intel compiler
> >
> > ENH: Adding method to set global physical space tolerance
> >
> > COMP: Explicitly add override to GetNameOfClass method
> >
> > BUG: Add new TypeMacro for non-overloaded classes
> >
> > BUG: Fix obscure race condition on access thread pool initialization
> >
> > BUG: Updating FDFImageIO remote module
> >
> >
> > Christopher Mullins (15):
> >
> > COMP: Allows latex to compile for ITKSoftwareGuide
> >
> > COMP: Allows latex to compile for ITKSoftwareGuide
> >
> > COMP: Wrap MeshBase templates
> >
> > COMP: Wrap MeshBase templates
> >
> > COMP: Fix warning in BlockMatchingImageFilter
> >
> > STYLE: Line lengths in examples should be no longer than 80 chars.
> >
> > COMP: Wrap the remaining MeshBase and MeshToMeshFilter types.
> >
> > COMP: Fix LaTeX warnings.
> >
> > STYLE: Fix formatting/punctuation errors.
> >
> > STYLE: Formatting and punctuation fixes.
> >
> > DOC: Edits for Book 2 Chapter 1 documentation in the Examples.
> >
> > DOC: Edits for book 2 chapter 2.
> >
> > DOC: More chapter 2 edits
> >
> > DOC: Book 2 Chapter 3 edits (part 1)
> >
> > DOC: book 2 chapter 4 Segmentation edits
> >
> >
> > Danny Perry (2):
> >
> > BUG: adding test for vnl_sparse_matrix::mult()
> >
> > BUG: size of q buffer should actually be (this->rows())*pcols.
> >
> >
> > David T. Chen (1):
> >
> > DOC: Fixed HistogramThresholdImageFitler
> >
> >
> > Dirk Padfield (1):
> >
> > BUG: Corrected processing of last sigma
> >
> >
> > GCC-XML Upstream (1):
> >
> > ENH: pygccxml v1.6.2 (reduced)
> >
> >
> > Gert Wollny (1):
> >
> > COMP: Fix SSE2 build errors with WrapITK on GCC 4.9. (ForRelease)
> >
> >
> > Girish Mallya (1):
> >
> > BUG: Tests added for BinaryImageToLabelMapFilter for single-row
> images.
> >
> >
> > Hans Johnson (24):
> >
> > COMP: Add tolerance for comparing floating point
> >
> > PERF: Remove non-threadable algorithm components
> >
> > COMP: Add tolerance for comparing floating point
> >
> > PERF: Remove non-threadable algorithm components
> >
> > PERF: Remove large foot print of PDF derivatives.
> >
> > PERF: Revert Remove large foot print of PDF derivatives.
> >
> > STYLE: Test against almost equal for floating point values
> >
> > STYLE: Non-exact floating point testing
> >
> > PERF: Distribute initialization per thread buffers
> >
> > ENH: Remove unnecessary mutable qualifier.
> >
> > STYLE: Remove comment with no meaning.
> >
> > ENH: Moved accumlator logic to main MI class
> >
> > ENH: Allow staggering of accumulations per thread.
> >
> > PERF: Zero reset thread buffers during finalize
> >
> > BUG: Syntax error in comment
> >
> > PERF: Add non-blocking mutex locking.
> >
> > ENH: Use TryLock minimize thread stalls
> >
> > BUG: ThreadedIndexedContainerPartitioner is inclusive
> >
> > STYLE: Remove include_regular_expression from Examples
> >
> > BUG: Demonstrate Inv(Inv(T)) != T
> >
> > BUG: Ensure Inv(Inv(T)) == T for transforms
> >
> > COMP: Valgrind detects uninitialized memory read
> >
> > COMP: Missing required base class API component
> >
> > ENH: Expand interface for selecting threadpool
> >
> >
> > Ismael Belghiti (1):
> >
> > DOC: Spelling Error in PatchBasedDenoisingBaseImageFilter
> >
> >
> > Jim Miller (1):
> >
> > STYLE: Removing what appears to be a temporary file
> >
> >
> > Johan Andruejol (1):
> >
> > ENH: Fix normalization for null vectors and return the norm
> >
> >
> > Jon Haitz Legarreta (1):
> >
> > ENH: New test for itkLabelShapeOpeningImageFilter
> >
> >
> > Kent Williams (9):
> >
> > COMP: use find_package(VTK COMPONENTS) to specify just needed VTK
> > Components
> >
> > BUG: ImageSources/test/CMakeLists.txt incorrect library var
> reference
> >
> > COMP: Fix coverity defects related to RegistrationV4 examples
> >
> > COMP: silence warning of vnl_vector_fixed_ref::assert_size
> >
> > COMP: Fix various Coverity warnings
> >
> > COMP: Fix a typo in an error message print statement.
> >
> > COMP: itk::Command-derived class used pointless dynamic_cast.
> >
> > PERF: Don't recompute InternalInverse repeatedly
> >
> > COMP: Correct orientation/spacing for Philips MultiFrame
> >
> >
> > Mark Hiner (2):
> >
> > ENH: Update SCIFIO remote module hash
> >
> > BUG: Fix duplicate variables in Windows
> >
> >
> > Matthew McCormick (105):
> >
> > DOC: Fix itkSetGetDecoratedInputMacro Doxygen macro.
> >
> > ENH: Move FFTComplexToComplexImageFilter out of Review.
> >
> > ENH: Add VnlComplexToComplexFFTImageFilter.
> >
> > BUG: Use fixed seed for Vnl FFT tests for repeatibility.
> >
> > ENH: Bump CMakeLists.txt version to 4.7.0.
> >
> > BUG: ArchiveTestingData.py future imports must occur at the
> beginning.
> >
> > BUG: Do not run vnl_test_na with broken libc++.
> >
> > DOC: Remove Image2.cxx reference from Book 2.
> >
> > DOC: Fix Software Guide page overruns in IterativeClosestPoint3.cxx.
> >
> > DOC: Remove references to Book 1 sections from Book 2.
> >
> > DOC: Make BinaryThresholdImageFilter not floating.
> >
> > DOC: Fix Software Guide figure caption for FlipImageFilter.
> >
> > DOC: Avoid duplicate figure description in ResampleImageFilter2.cxx.
> >
> > DOC: Remove duplicate figure in
> > LaplacianRecursiveGaussianImageFilter2.cxx.
> >
> > DOC: ImageRandomConstIteratorWithIndex table reference.
> >
> > DOC: Fix Software Guide page overruns in
> > IterativeClosestPoint{1,2}.cxx.
> >
> > DOC: Remove duplicate text in LaplacianRecursiveGaussian example.
> >
> > BUG: Uninitialized m_TransformDirection in
> > ComplexToComplexFFTImageFilter.
> >
> > BUG: Fix offset[2] in PointSetToSpatialObjectDemonsRegistrationTest.
> >
> > STYLE: Fix style in VoronoiDiagram2D.
> >
> > BUG: Fix invalid assignment of second VoronoiBoundaryOrigin.
> >
> > BUG: Bump GCCXML to 2014-08-06.
> >
> > BUG: Remove unused m_{SplitEpsilon,SigmoidPrimeOffset}.
> >
> > BUG: Fix Win MultiThreader check for successful process creation.
> >
> > BUG: Fix VTKPolyDataMeshIO writing for 2D second rank tensor.
> >
> > COMP: Fix ImageRegistration8RegisteredSlice.png baseline name.
> >
> > DOC: itk::statistics -> itk::Statistics.
> >
> > COMP: Fix transform type for ITKv3/IterativeClosestPoint2.
> >
> > BUG: Fix invalid assignment of second VoronoiBoundaryOrigin.
> >
> > COMP: Improve const correctness of
> > GradientRecursiveGaussianImageFilter.
> >
> > BUG: Call clear instead of empty on PatchBasedDenoising
> EmptyCaches().
> >
> > BUG: Fix Size() in ImageToListSampleAdaptor for VectorImage's.
> >
> > COMP: ThreadJob NULL not defined.
> >
> > BUG: Fix alpha assignment for RGBA TIFF.
> >
> > COMP: Remove unused typedefs in LevelSetsv4Visualization.
> >
> > COMP: Remove unused typedef's in VtkGlue.
> >
> > ENH: Mark BSplineWarping2Test as RUNS_LONG.
> >
> > BUG: Fix Nifti IO read with large images.
> >
> > COMP: Remove call for non-existent variable in Nifti debugging.
> >
> > BUG: Close the file on Read and Write in HDF5TransformIO.
> >
> > BUG: Remove InsightLegacy test code from TransformHDF5Test.
> >
> > ENH: Add {Set,Get}TransformIO for TransformFile{Reader,Writer}.
> >
> > STYLE: Use SeriesUIDContainerType and FileNamesContainerType
> >
> > ENH: Allow specification of orthogonality tolerance in rigid
> > transforms.
> >
> > BUG: TransformFileReader does not clear its TransformList.
> >
> > BUG: Prevent dangling pointer in HDF5TransformIO.
> >
> > COMP: Do not use _stat64 with MinGW-32.
> >
> > BUG: Improve thread-safety and performance of
> > PCAShapeSignedDistanceFunction.
> >
> > DOC: itk::statistics -> itk::Statistics.
> >
> > DOC: Remove duplicate text in LaplacianRecursiveGaussian example.
> >
> > DOC: Fix Software Guide page overruns in
> > IterativeClosestPoint{1,2}.cxx.
> >
> > COMP: Address LaplacianDeformation Doxygen warnings.
> >
> > BUG: TransformFileReader does not clear its TransformList.
> >
> > BUG: Prevent dangling pointer in HDF5TransformIO.
> >
> > COMP: Fix missing prefix in ITKv3ImageRegistration20Test.
> >
> > BUG: Do not return SmartPointers in
> TimeVaryingVelocityFieldTransform
> >
> > COMP: Do not wrap the FixedArray of Image SmartPointer's.
> >
> > COMP: Add missing wrapping for TransformIOBaseTemplate.
> >
> > COMP: Mark DeformableRegistration6Test as RUNS_LONG.
> >
> > STYLE: Improve style in BinaryImageToLabelMapFilter.
> >
> > BUG: Fix BinaryImageToLabelMapFilter on 1D image.
> >
> > ENH: Improve precision of the joint PDF sum
> >
> > BUG: Fix BinShrinkImageFilter for different input/output image
> types.
> >
> > COMP: Fix transform type for ITKv3/IterativeClosestPoint2.
> >
> > BUG: Use -py3 when building wrapping for Python 3.
> >
> > COMP: Add missing wrapping for TransformIOBaseTemplate.
> >
> > DOC: Improve ImageRegistration4 grammar.
> >
> > ENH: Add IOTransformDCMTK Remote module.
> >
> > BUG: gdcm::StringFilter recognizes backslash delimiter.
> >
> > DOC: Add migration guide for GDCM Rescale slope intercept apply on
> > write.
> >
> > COMP: Remove unused typedef's in GPU code.
> >
> > STYLE: Improve style of HoughTransform2DLinesImageFilter example.
> >
> > COMP: Use ConceptChecking for IterativeInverse dimension check.
> >
> > COMP: Wrap TransformIOBaseTemplate for const SmartPointer.
> >
> > COMP: Add warning exceptions for third party pcre, swig, gccxml.
> >
> > ENH: Bump ITK version to 4.6.1.
> >
> > BUG: Add missing ITK_OVERRIDE to ITKImageeSources module.
> >
> > BUG: Remove GaussianImageSource members shadowing
> GenerateImageSource.
> >
> > STYLE: Style fixes to ITKImageSources module.
> >
> > BUG: GaussianSpatialFunction and GaborImageSource use
> > SpacePrecisionType.
> >
> > BUG: Do not perform itk_download_attempt_check when not building
> ITK.
> >
> > DOC: Update GDCMImageIO rescale slope intercept doc.
> >
> > BUG: Only register requestion IO COMPONENT modules.
> >
> > BUG: Fix wrapping .i, .idx CMake dependencies.
> >
> > COMP: Add VTK Python module when wrapping ITKVtkGlue.
> >
> > STYLE: Remove NULL definition in itkVoronoiDiagram2DGenerator.
> >
> > STYLE: VoronoiDiagram2DGenerator defines a VoronoiDiagramType
> typedef.
> >
> > COMP: Add missing VTK module dependency for
> LevelSetsv4Visualization.
> >
> > BUG: By default, do not create any fixed parameters.
> >
> > STYLE: Remove trivial method comments in itkTransform.hxx.
> >
> > BUG: PolylineMask Filter's GenerateData is protected / virtual.
> >
> > ENH: Add HigherOrderAccurateGradient Module.
> >
> > BUG: Use input RequestedRegion Index in SliceBySliceImageFilter
> > internal.
> >
> > COMP: Remove extra semi-colon, variable scope in DCMTKFileReader.
> >
> > STYLE: Style fixes for Transform classes.
> >
> > DOC: Increase Doxygen LOOKUP_CACHE_SIZE.
> >
> > BUG: MatrixOffsetTransformBase::GetFixedParameters not thread safe.
> >
> > DOC: Index Wiki examples with Doxygen.
> >
> > COMP: Bump SphinxExamples remote module.
> >
> > DOC: Index Sphinx examples in Doxygen.
> >
> > COMP: Remove old java examples.
> >
> > COMP: Remove duplicate DiffusionTensor3DReconstruction example
> > reference.
> >
> > COMP: Address GradientAnisotropicDiffusionImageFilter example
> settings.
> >
> > COMP: Bump Sphinx Examples remote.
> >
> > COMP: Bump WikiExamples remote.
> >
> >
> > MetaIO Maintainers (1):
> >
> > MetaIO (reduced)
> >
> >
> > Michka Popoff (40):
> >
> > ENH: Fixes for python 3 support
> >
> > BUG: Add VTK_VERSION for older VTK versions
> >
> > BUG: Improve SWIG version check
> >
> > COMP: Add wrapping for ThreadPool and ThreadJob
> >
> > COMP: Remove unimplemented DestroyPool method
> >
> > COMP: Fix itkVnlComplexToComplexFFTImageFilter wrapping
> >
> > COMP: Do not hide pygccxml warnings
> >
> > ENH: Update links in readme file
> >
> > BUG: Improve SWIG version check
> >
> > BUG: Add VTK_VERSION for older VTK versions
> >
> > STYLE: Remove trailing whitespaces
> >
> > STYLE: Set ITK_USE_SYTEM_ZLIB and ITK_USE_SYTEM_SZIP
> >
> > BUG: Fix memory leak in MetaImageIO after exception
> >
> > ENH: Add script to update pygccxml from upstream
> >
> > BUG: Update VTK minimum version (for release)
> >
> > BUG: Fix memory leak in MetaImageIO after exception
> >
> > ENH: Remove Sun OS compatibility for the wrappings
> >
> > COMP: Fix for conversion to non-pointer like type warning
> >
> > STYLE: LabelObject style
> >
> > DOC: Remove broken link from LabelObject class description
> >
> > ENH: Do not setup the python tests if not asked
> >
> > ENH: Add new GetTypes() and GetTypesAsList() methods to the template
> > class
> >
> > COMP: Fix CMP0054 warnings in wrappings
> >
> > STYLE: Remove old cmake < 2.8.4 specific code
> >
> > STYLE: Remove old cmake < 2.8.5 specific code
> >
> > ENH: Update to PCRE 8.36
> >
> > COMP: Refactor Wrapping setup and fix legacy warnings
> >
> > ENH: Add wrapping configuration to ITKConfig.cmake
> >
> > STYLE: Some minor code cleanup in the wrapping setup
> >
> > DOC: Fix typo in RelabelComponentImageFilter
> >
> > ENH: Deprecate VectorResampleImageFilter
> >
> > DOC: Add migration guide for ::Zero and ::One
> >
> > ENH: Deprecate ::Zero and ::One
> >
> > ENH: Add option to disable sorting by size in
> > itkRelabelComponentImageFilter
> >
> > ENH: Add Vector and RGB wrapping to linear interpolator
> >
> > STYLE: Remove SORT macro in wrappings
> >
> > COMP: Fix warning for InterpolateImageFunction wrapping
> >
> > COMP: Add a check for Blocks in GPU module
> >
> > COMP: Bump SCIFIO to fix test build warnings
> >
> > COMP: Fix wrapping of itkImageFunctionBase
> >
> >
> > Nick Tustison (7):
> >
> > BUG: Need to explicitly specify spline order.
> >
> > ENH: Initializing the transform center.
> >
> > BUG: Need to check the dynamic cast before any calls.
> >
> > ENH: Adding modifications for point set metrics.
> >
> > BUG: Need to specify TInternalComputationValueType for default
> metric.
> >
> > ENH: Adding sparse points to B-spline field estimate.
> >
> > BUG: Uninitialized variables.
> >
> >
> > Richard Beare (1):
> >
> > ENH: Include TIFF tags in the MetaDataDictionary
> >
> >
> > Taylor Braun-Jones (1):
> >
> > BUG: Fix SliceBySliceImageFilter doesn't propagate information
> > internally
> >
> >
> > Umang B (1):
> >
> > ENH: Use thread pool to dispatch multithreading tasks
> >
> >
> > Vivien Delmon (2):
> >
> > BUG: ExtractImageFilter::CollapseToSubMatrix fix
> >
> > ENH: Add a test on extracted directions in CollapseToSubMatrix mode
> >
> >
> > Vladimir S. FONOV (1):
> >
> > BUG: Fixing incorrect MINC style inverse transform
> >
> >
> >
> > -----------------------------------------------------
> >
> > Errors or omissions? Please fix them here:
> >
> >
> >
> https://docs.google.com/document/d/1V0zNgFrm_GyF1jOC00fMq-7VBXk4hHmHL62qByfeKP4/edit?usp=sharing
> >
> >
> >
> >
> > _______________________________________________
> > Powered by www.kitware.com
> >
> > Visit other Kitware open-source projects at
> > http://www.kitware.com/opensource/opensource.html
> >
> > Kitware offers ITK Training Courses, for more information visit:
> > http://kitware.com/products/protraining.php
> >
> > Please keep messages on-topic and check the ITK FAQ at:
> > http://www.itk.org/Wiki/ITK_FAQ
> >
> > Follow this link to subscribe/unsubscribe:
> > http://public.kitware.com/mailman/listinfo/insight-developers
> >
>
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