[Community] [Insight-users] Error

Wed Oct 16 12:55:55 EDT 2013

Matt!!!

Here is my CMakeLists.txt ::

*********************************************************************************************************
# This project is designed to be built outside the Insight source tree.

cmake_minimum_required(VERSION 2.4)
if(COMMAND CMAKE_POLICY)
  cmake_policy(SET CMP0003 NEW)
endif()
PROJECT(RegMeth)

# Find ITK.
FIND_PACKAGE(ITK)

IF(ITK_FOUND)

INCLUDE(${ITK_USE_FILE})

ELSE(ITK_FOUND)
  MESSAGE(FATAL_ERROR "Cannot build without ITK.  Please set ITK_DIR.")

ENDIF(ITK_FOUND)

ADD_EXECUTABLE(RegMeth RegMeth.cxx )

TARGET_LINK_LIBRARIES(RegMeth ${ITK_LIBRARIES}  )

*******************************************************************************************************************

The problem is  in the Target_LINK_LIBRARIES, may be??

Regards!!

2013/10/16 Matt McCormick <matt.mccormick at kitware.com>

> Hi Hana,
>
> What does your CMakeLists.txt look like?
>
> Thanks,
> Matt
>
> On Wed, Oct 16, 2013 at 12:18 PM, Hana Cherif <hanacherif62 at gmail.com>
> wrote:
> > thank you Christin, I mean 'itkImageRegistrationMethod.h'!! This file
> exists
> > in itk include's folder ,, This why i thought that i must add additional
> > include directories in my path,,
> >
> >
> > 2013/10/16 Chr. Rossmanith <cr at neuro.ma.uni-heidelberg.de>
> >
> >> Try without 'e' -> itkImageRegistrationMethod.h  not ...Methode.h
> >>
> >> Christina Rossmanith
> >>
> >> Am 16.10.2013 08:35, schrieb Hana Cherif:
> >>
> >> I got this error Matt, when i try to compile my code by gcc compiler :''
> >> itkImageRegistrationMethode.h" No such file or directory compilation
> >> terminated!!!!!!
> >>
> >> Although i have compiled itk and my project with RelWithDebInfo as type
> of
> >> CMakeBuild!!
> >>
> >> Thanks,,
> >>
> >>
> >> 2013/10/15 Hana Cherif <hanacherif62 at gmail.com>
> >>>
> >>> Thank you so much Matt,,  for all these informations!!
> >>>
> >>>
> >>> 2013/10/15 Matt McCormick <matt.mccormick at kitware.com>
> >>>>
> >>>> Hi Hana,
> >>>>
> >>>> Adding additional include directories should not be necessary.
> >>>>
> >>>> However, when compiling ITK and your project, make sure to set the
> >>>> CMAKE_BUILD_TYPE to Debug or RelWithDebInfo, which will add the "-g"
> >>>> flag when compiling.  This adds the symbols (names of functions and
> >>>> variables) to the output executable so gdb knows what it is looking
> >>>> at.
> >>>>
> >>>> HTH,
> >>>> Matt
> >>>>
> >>>> PS. Please reply-to-all to keep messages on the list.
> >>>>
> >>>> On Tue, Oct 15, 2013 at 7:29 PM, Hana Cherif <hanacherif62 at gmail.com>
> >>>> wrote:
> >>>> > Yes Matt,,i tried to do that [1] ,, but tell me please how can i add
> >>>> > additional include directories to my path (I use gdb debuger) ?
> >>>> >
> >>>> > [1]: http://doc.ubuntu-fr.org/gdb
> >>>> >
> >>>> > Regards!!
> >>>> >
> >>>> >
> >>>> > 2013/10/15 Matt McCormick <matt.mccormick at kitware.com>
> >>>> >>
> >>>> >> Hi Hana,
> >>>> >>
> >>>> >> Examining the program in a debugger [1] like GDB should help.
> >>>> >>
> >>>> >> Thanks,
> >>>> >> Matt
> >>>> >>
> >>>> >> [1] http://software-carpentry.org/v3/debugging.html
> >>>> >>
> >>>> >> On Tue, Oct 15, 2013 at 5:06 PM, Hana Cherif <
> hanacherif62 at gmail.com>
> >>>> >> wrote:
> >>>> >> > Hello every body!!
> >>>> >> >
> >>>> >> > When i tried  to run the executable results from my own
> >>>> >> > registration
> >>>> >> > program,, I got this error :
> >>>> >> >
> >>>> >> >  /usr/local/include/ITK-4.4/vnl/vnl_matrix.h:207: T&
> >>>> >> > vnl_matrix<T>::operator()(unsigned int, unsigned int) [with T =
> >>>> >> > double]:
> >>>> >> > Assertion `c<cols()' failed.
> >>>> >> > Aborted (core dumped)
> >>>> >> >
> >>>> >> > Note that the compilation of that program has been completed
> >>>> >> > successfully!!
> >>>> >> >
> >>>> >> > What can be the source of this error pleaaaase help!!
> >>>> >> >
> >>>> >> > Thank you in advance!!
> >>>> >> >
> >>>> >> >
> >>>> >> > _____________________________________
> >>>> >> > Powered by www.kitware.com
> >>>> >> >
> >>>> >> > Visit other Kitware open-source projects at
> >>>> >> > http://www.kitware.com/opensource/opensource.html
> >>>> >> >
> >>>> >> > Kitware offers ITK Training Courses, for more information visit:
> >>>> >> > http://www.kitware.com/products/protraining.php
> >>>> >> >
> >>>> >> > Please keep messages on-topic and check the ITK FAQ at:
> >>>> >> > http://www.itk.org/Wiki/ITK_FAQ
> >>>> >> >
> >>>> >> > Follow this link to subscribe/unsubscribe:
> >>>> >> > http://www.itk.org/mailman/listinfo/insight-users
> >>>> >> >
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> >>>> >> >
> >>>> >
> >>>> >
> >>>
> >>>
> >>
> >>
> >>
> >> _____________________________________
> >> Powered by www.kitware.com
> >>
> >> Visit other Kitware open-source projects at
> >> http://www.kitware.com/opensource/opensource.html
> >>
> >> Kitware offers ITK Training Courses, for more information visit:
> >> http://www.kitware.com/products/protraining.php
> >>
> >> Please keep messages on-topic and check the ITK FAQ at:
> >> http://www.itk.org/Wiki/ITK_FAQ
> >>
> >> Follow this link to subscribe/unsubscribe:
> >> http://www.itk.org/mailman/listinfo/insight-users
> >>
> >>
> >>
> >> _____________________________________
> >> Powered by www.kitware.com
> >>
> >> Visit other Kitware open-source projects at
> >> http://www.kitware.com/opensource/opensource.html
> >>
> >> Kitware offers ITK Training Courses, for more information visit:
> >> http://www.kitware.com/products/protraining.php
> >>
> >> Please keep messages on-topic and check the ITK FAQ at:
> >> http://www.itk.org/Wiki/ITK_FAQ
> >>
> >> Follow this link to subscribe/unsubscribe:
> >> http://www.itk.org/mailman/listinfo/insight-users
> >>
> >
> >
> > _____________________________________
> > Powered by www.kitware.com
> >
> > Visit other Kitware open-source projects at
> > http://www.kitware.com/opensource/opensource.html
> >
> > Kitware offers ITK Training Courses, for more information visit:
> > http://www.kitware.com/products/protraining.php
> >
> > Please keep messages on-topic and check the ITK FAQ at:
> > http://www.itk.org/Wiki/ITK_FAQ
> >
> > Follow this link to subscribe/unsubscribe:
> > http://www.itk.org/mailman/listinfo/insight-users
> >
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> >
>
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