[CMake] BundleUtilities Question on Linux: Libraries Not Found during fixup?

[Clinton Stimpson]

To clarify, the patch I submitted saves you from debugging and figuring out 
what the real problem is.

The actual solution is to use the last parameter of fixup_bundle() and pass in 
"${QT_BINARY_DIR};${QT_LIBRARY_DIR}"

Clint

On Tuesday 20 April 2010 01:46:25 pm Clinton Stimpson wrote:
> I've already made a patch to fix this problem and put it in the bug tracker
> (along with a couple other patches).
> 
> Clint
> 
> On Tuesday 20 April 2010 01:42:50 pm kent williams wrote:
> > Well I found the magic incantation on OS X to get fixup_bundle work.
> > Now I'd like it to work on Linux.
> >
> > What's happening is I get many of these messages:
> >
> > warning: cannot resolve item 'not'
> >
> > The problem comes, as near as I can figure out, from when ldd is run
> > to discover the library prerequisites.  Running ldd generates a lot of
> > lines like this:
> > 	libQVTK.so.5.4 => not found
> > 	libQtGui.so.4 => not found
> >
> > So the solution seems pretty clear -- if you're on linux, use the
> > directory list passed into fixup_bundle in order to set
> > LD_LIBRARY_PATH before running ldd. Otherwise fixup_bundle seems to
> > want to fix up all sorts of libraries named 'not' and fails.
> >
> > I'd just fix it myself but my CMake-fu isn't strong enough to hack
> > BundleUtilities.cmake
> >
> > For now I think I'll just turn off fixup_bundle on Linux...
> >
> > compute22 106% ldd BRAINSTracerQT
> > 	libQVTK.so.5.4 => not found
> > 	libQtGui.so.4 => not found
> > 	libpng12.so.0 => /usr/lib64/libpng12.so.0 (0x0000003a22d00000)
> > 	libSM.so.6 => /usr/X11R6/lib64/libSM.so.6 (0x0000003a1f200000)
> > 	libICE.so.6 => /usr/X11R6/lib64/libICE.so.6 (0x0000003a1f000000)
> > 	libXrender.so.1 => /usr/X11R6/lib64/libXrender.so.1 (0x0000003a1fc00000)
> > 	libfreetype.so.6 => /usr/lib64/libfreetype.so.6 (0x0000003a1f400000)
> > 	libfontconfig.so.1 => /usr/lib64/libfontconfig.so.1 (0x0000003a1fa00000)
> > 	libXext.so.6 => /usr/X11R6/lib64/libXext.so.6 (0x0000003a1ee00000)
> > 	libX11.so.6 => /usr/X11R6/lib64/libX11.so.6 (0x0000003a1ea00000)
> > 	libQtCore.so.4 => not found
> > 	libz.so.1 => /usr/lib64/libz.so.1 (0x0000003a1e800000)
> > 	libgthread-2.0.so.0 => /usr/lib64/libgthread-2.0.so.0
> > (0x0000003a24c00000) libglib-2.0.so.0 => /usr/lib64/libglib-2.0.so.0
> > (0x0000003a20a00000) libgobject-2.0.so.0 =>
> > /usr/lib64/libgobject-2.0.so.0 (0x0000003a20e00000) librt.so.1 =>
> > /lib64/tls/librt.so.1 (0x0000003a23600000)
> > 	libpthread.so.0 => /lib64/tls/libpthread.so.0 (0x0000003a1ec00000)
> > 	libdl.so.2 => /lib64/libdl.so.2 (0x0000003a1e600000)
> > 	libITKAlgorithms.so.3.18 => not found
> > 	libITKStatistics.so.3.18 => not found
> > 	libITKFEM.so.3.18 => not found
> > 	libitkNetlibSlatec.so.3.18 => not found
> > 	libitkv3p_lsqr.so.3.18 => not found
> > 	libITKEXPAT.so.3.18 => not found
> > 	libitksys.so.3.18 => not found
> > 	libvtkRenderingAddOn.so => not found
> > 	libvtkRendering.so.5.4 => not found
> > 	libvtkFiltering.so.5.4 => not found
> > 	libvtkVolumeRendering.so.5.4 => not found
> > 	libtcl8.4.so => /usr/lib64/libtcl8.4.so (0x0000002a95594000)
> > 	libModuleDescriptionParser.so => not found
> > 	libvtkQtChart.so.5.4 => not found
> > 	libQtOpenGL.so.4 => not found
> > 	libGLU.so.1 => /usr/X11R6/lib64/libGLU.so.1 (0x0000003a21800000)
> > 	libGL.so.1 => /usr/X11R6/lib64/libGL.so.1 (0x0000003a21400000)
> > 	libm.so.6 => /lib64/tls/libm.so.6 (0x0000003a1e400000)
> > 	libQtSql.so.4 => not found
> > 	libvtkViews.so.5.4 => not found
> > 	libvtkInfovis.so.5.4 => not found
> > 	libvtklibxml2.so.5.4 => not found
> > 	libvtkalglib.so.5.4 => not found
> > 	libITKNumerics.so.3.18 => not found
> > 	libITKBasicFilters.so.3.18 => not found
> > 	libITKIO.so.3.18 => not found
> > 	libITKNrrdIO.so.3.18 => not found
> > 	libitkgdcm.so.3.18 => not found
> > 	libitkjpeg12.so.3.18 => not found
> > 	libitkjpeg16.so.3.18 => not found
> > 	libitkopenjpeg.so.3.18 => not found
> > 	libuuid.so.1 => /lib64/tls/libuuid.so.1 (0x0000002a95758000)
> > 	libitkpng.so.3.18 => not found
> > 	libitktiff.so.3.18 => not found
> > 	libitkjpeg8.so.3.18 => not found
> > 	libITKSpatialObject.so.3.18 => not found
> > 	libITKCommon.so.3.18 => not found
> > 	libitkvnl_inst.so.3.18 => not found
> > 	libitkvnl_algo.so.3.18 => not found
> > 	libitkv3p_netlib.so.3.18 => not found
> > 	libitkvnl.so.3.18 => not found
> > 	libitkvcl.so.3.18 => not found
> > 	libITKMetaIO.so.3.18 => not found
> > 	libITKDICOMParser.so.3.18 => not found
> > 	libITKniftiio.so.3.18 => not found
> > 	libITKznz.so.3.18 => not found
> > 	libitkzlib.so.3.18 => not found
> > 	libvtkWidgets.so.5.4 => not found
> > 	libvtkHybrid.so.5.4 => not found
> > 	libvtkGraphics.so.5.4 => not found
> > 	libvtkverdict.so.5.4 => not found
> > 	libvtkImaging.so.5.4 => not found
> > 	libvtkftgl.so.5.4 => not found
> > 	libvtkfreetype.so.5.4 => not found
> > 	libXt.so.6 => /usr/X11R6/lib64/libXt.so.6 (0x0000003a23e00000)
> > 	libXss.so.1 => /usr/X11R6/lib64/libXss.so.1 (0x0000003a26900000)
> > 	libXft.so.2 => /usr/X11R6/lib64/libXft.so.2 (0x0000003a20400000)
> > 	libvtkIO.so.5.4 => not found
> > 	libvtkCommon.so.5.4 => not found
> > 	libvtkDICOMParser.so.5.4 => not found
> > 	libvtkmetaio.so.5.4 => not found
> > 	libvtksqlite.so.5.4 => not found
> > 	libvtkpng.so.5.4 => not found
> > 	libvtktiff.so.5.4 => not found
> > 	libvtkzlib.so.5.4 => not found
> > 	libvtkjpeg.so.5.4 => not found
> > 	libvtkexpat.so.5.4 => not found
> > 	libvtksys.so.5.4 => not found
> > 	libvtkexoIIc.so.5.4 => not found
> > 	libvtkNetCDF.so.5.4 => not found
> > 	libstdc++.so.6 => /usr/lib64/libstdc++.so.6 (0x0000003a20c00000)
> > 	libgcc_s.so.1 => /lib64/libgcc_s.so.1 (0x0000003a20600000)
> > 	libc.so.6 => /lib64/tls/libc.so.6 (0x0000003a1e100000)
> > 	libexpat.so.0 => /usr/lib64/libexpat.so.0 (0x0000003a1f600000)
> > 	/lib64/ld-linux-x86-64.so.2 (0x0000003a1df00000)
> > 	libXxf86vm.so.1 => /usr/X11R6/lib64/libXxf86vm.so.1 (0x0000003a21e00000)
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