ITK/Release 4.7 Changed From Previous

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List of changes since v4.7-rc02


Bradley Lowekamp (1):

     BUG: IOFDF remote module should stay with InsightConsortium repo

Christopher Mullins (3):

     DOC: Fix code overlapping figure
     STYLE: Keep the text in the margins
     STYLE: Put newline before long doxygen reference

Cory Quammen (1):

     BUG: Fix segfaults in ITKExamples

Matthew McCormick (8):

     BUG: Reset ITK_MODULES_REQUESTED to all modules with multiple calls.
     BUG: Configure against VTK 5.
     COMP: Add ITK_SOURCE_DIR to doxygen EXAMPLE_PATH.
     COMP: Increase DOT_GRAPH_MAX_NODES.
     DOC: Add Doxygen macros for itkSetGetDecoratedObjectMacro.
     ENH: Warning when reading a PNG with UNKNOWN unit and non-unit spacing.
     BUG: Fix VTK5 module export code.
     BUG: Fix LevelSetsv4Visualization VTK variable names.

Michka Popoff (1):

     DOC: Improvements for Book1, Chap4


List of changes since v4.7-rc01


Ali Ghayoor (1):

     DOC: Revise the registration examples of ITKSoftwareGuide

Arnaud Gelas (3):

     ENH: Adding SubdivisionQuadEdgeMeshFilters to ITK as remote module
     COMP: address clang -Winconsistent-missing-override in ITKQuadEdgeMesh
     COMP: fix warnings on dashboard for Subdivision remote module

Bradley Lowekamp (5):

     BUG: Fix segfault when setting displacement field as null
     BUG: Don't enable SSE rounding with OSX and gccxml
     BUG: Add portable access to Tiff field name
     BUG: Fix conversion compilation error
     BUG: Rename remote module FDFImageIO -> IOFDF

Christopher Mullins (6):

     STYLE: Fix line length in OpenJPEG license for 80 character.
     DOC: Finish the ImageLinearIteratorWithIndex example.
     DOC: Text and picture problems, book2
     BUG: Fix text in margin issues
     DOC: Edits for the beginning of chapter 5, Statistics
     DOC: Fix empty code block.

Cory Quammen (1):

     COMP: Avoid including VTK_USE_FILE within ITK

Kent Williams (1):

     ENH: Add test to exercise issue with Transform::GetInverse

Matthew McCormick (7):

     BUG: Register AzimuthElevationToCartesianTransform to factories.
     DOC: Update texture feature class references.
     BUG: Fix texture feature correlation computation for constant image.
     STYLE: Put ImageToImageFilterCommon in its own file.
     BUG: Wrap ImageToImageFilterCommon.
     STYLE: Put ImageSourceCommon in its own file.
     COMP: Add missing itkImageRegionSplitterBase to ImageSourceCommon.

Michka Popoff (1):

     ENH: Add CVD and CVF types to VectorIndexSelectionCastImageFilter wrappings

Ziv Yaniv (1):

     COMP: fixed warnings from gcc4.1.2, made implicit casts explicit


List of changes since v4.6.0


Alexander Schmidt-Richberg (1):

     ENH: Updated Remote Module VariationalRegistration to new git tag

Ali Ghayoor (10):

     ENH: Make ITKv4 compatible with ITKSoftwareGuide
     ENH: Add GetCurrentStepLength to RegularStepGradDescentOptv4
     ENH: Convert three ImageRegistration Examples to ITKv4
     ENH: Add multi-Res and multistage registration Examples to ITKv4
     ENH: Convert DeformableReg examples to ITKv4 reg framework
     BUG: Expand a test to reflect multi-metric registration bug
     BUG: Fix multi metric point sampling bug in ImageRegistrationMethodv4
     ENH: Add direct initialization to SyN registration
     ENH: Direct initialization of SyN by restoring the state
     ENH: LandmarkBasedTransformInitializer supports BSplineTransformType

Arnaud Gelas (15):

     COMP: use find_package(VTK COMPONENTS) for LevelSetsv4Visualization
     ENH: Importing Laplacian Deformation for QuadEdgeMesh
     DOC: Add more explanation about SmoothingQuadEdgeMeshFilter's usage
     ENH: SmoothingQuadEdgeMeshFilter::SetCoefficientMethod calls Modified()
     ENH: Add progress report in itk::SmoothingQuadEdgeMeshFilter
     BUG: fix gdcm version in GDCMImageIO.
     COMP: missing cast when calling gdcm::DataElement::SetByteValue
     COMP: missing cast when calling gdcm::DataElement::SetByteValue
     ENH: increase LaplacianDeformation code coverage
     STYLE: use typedef rather than inheritance
     BUG: GDCMImageIO was not working properly when m_KeepOriginalUID is false
     BUG: split include directories into appropriate cmake variables HDF5
     BUG: missing gdcm libraries when using system GDCM
     DOC: fix doxygen documentaiton for itk::LaplacianDeformationQuadEdgeMeshFilter
     ENH: Add one method to erase a tag into MetaDataDictionary

Bill Lorensen (5):

     ENH: Specify required VTK modules
     COMP: Wiki examples require additional vtk modules
     ENH: Modify WikiExamples remote config
     COMP: Bad test signature
     COMP: Update tag for wiki examples

Brad King (6):

     COMP: Fix vxl_config_macros usage of CMake check macros
     ENH: Use if(DEFINED) to simplify conditions
     COMP: Fix vxl_config_macros checks broken by refactoring
     COMP: Fix one more vxl_config_macros check broken by refactoring
     BUG: Fix itk_module_config for repeated calls
     BUG: Fix itk_module_config for repeated calls

Bradley Lowekamp (52):

     ENH: Adding License file from upstream MetaIO
     ENH: Adding script to update MetaIO from upstream
     ENH: Remove ITK MetaIO to prepare for upstream import
     PERF: Remove dynamically allocated temporary in evaluate method
     COMP: Fix variable type for Set/Get macros
     BUG: Implement ITK Style Singleton design pattern
     ENH: Add no throw exception specification for UnRegister methods
     COMP: Must specify order as "noexcept override"
     BUG: Add GetInverse for IdentityTransform
     ENH: Adding SetIdentity method to base DisplacementField class
     BUG: Remove unused redefinition of NULL
     BUG: Don't print to std::cout in PrintSelf
     ENH: Prefer the PrintSelfObjectMacro for printing nested objects
     BUG: Use METER of sCAL scale unit
     BUG: Use PNG_SCALE_METER for PNG sCAL unit
     BUG: Use METER of sCAL scale unit
     BUG: Use PNG_SCALE_METER for PNG sCAL unit
     COMP: Fix signed to unsigned int comparison
     BUG: Fix overflows computing size of read tiff image
     ENH: Extract TiffReaderInternal to separate file
     ENH: Refactor ReadTwoSamplePerPixelImage into template function
     ENH: Refactor GenericReadImage into template function
     BUG: Remove Zeiss 2-channel support code in TIFFImageIO ( and LSMImageIO )
     ENH: Refactor method to convert RGBA image to output buffer
     ENH: Refactor duplicated code to read a page
     BUG: Fix right oriented tiff images
     BUG: Remove dead separated plannar code, add test
     STYLE: Fix minor kwstyle defects in test and test results
     BUG: Use array delete operator for array new allocations
     ENH: add arbitrary TIFF TAGs to meta-data dictionary
     ENH: Reduce code duplicate in TIFFImageIO::ReadCurrentPage
     BUG: Address Coverity warning about null pointer dereferences
     ENH: Remove support for TIFF tile as 3D and dead code
     ENH: RGBA read images should stay unchanged.
     BUG: Override method to MakeOutput by name
     ENH: Refactor per pixel conversion function to per scan-line method
     PERF: Refactor color table lookup
     BUG: Adding missing parentheses around boolean expression
     ENH: adding TIFFImageIO test for RGB palette images
     PERF: Improve recursive Gaussian perfromance with VectorImages
     ENH: Query libtiff to determine compression support
     BUG: Support TIFF tiled image with TIFFReadRGBAImage
     BUG: Use SizeValueType for length of scanline
     PERF: Store causal results directly in output buffers
     COMP: Add explicit conversion to const char
     COMP: Explicitly add override to GetNameOfClass method
     COMP: Address internal segmentation fault with Intel compiler
     ENH: Adding method to set global physical space tolerance
     COMP: Explicitly add override to GetNameOfClass method
     BUG: Add new TypeMacro for non-overloaded classes
     BUG: Fix obscure race condition on access thread pool initialization
     BUG: Updating FDFImageIO remote module

Christopher Mullins (15):

     COMP: Allows latex to compile for ITKSoftwareGuide
     COMP: Allows latex to compile for ITKSoftwareGuide
     COMP: Wrap MeshBase templates
     COMP: Wrap MeshBase templates
     COMP: Fix warning in BlockMatchingImageFilter
     STYLE: Line lengths in examples should be no longer than 80 chars.
     COMP: Wrap the remaining MeshBase and MeshToMeshFilter types.
     COMP: Fix LaTeX warnings.
     STYLE: Fix formatting/punctuation errors.
     STYLE: Formatting and punctuation fixes.
     DOC: Edits for Book 2 Chapter 1 documentation in the Examples.
     DOC: Edits for book 2 chapter 2.
     DOC: More chapter 2 edits
     DOC: Book 2 Chapter 3 edits (part 1)
     DOC: book 2 chapter 4 Segmentation edits

Danny Perry (2):

     BUG: adding test for vnl_sparse_matrix::mult()
     BUG: size of q buffer should actually be (this->rows())*pcols.

David T. Chen (1):

     DOC: Fixed HistogramThresholdImageFitler

Dirk Padfield (1):

     BUG: Corrected processing of last sigma

GCC-XML Upstream (1):

     ENH: pygccxml v1.6.2 (reduced)

Gert Wollny (1):

     COMP: Fix SSE2 build errors with WrapITK on GCC 4.9. (ForRelease)

Girish Mallya (1):

     BUG: Tests added for BinaryImageToLabelMapFilter for single-row images.

Hans Johnson (24):

     COMP: Add tolerance for comparing floating point
     PERF: Remove non-threadable algorithm components
     COMP: Add tolerance for comparing floating point
     PERF: Remove non-threadable algorithm components
     PERF: Remove large foot print of PDF derivatives.
     PERF: Revert Remove large foot print of PDF derivatives.
     STYLE: Test against almost equal for floating point values
     STYLE: Non-exact floating point testing
     PERF: Distribute initialization per thread buffers
     ENH: Remove unnecessary mutable qualifier.
     STYLE: Remove comment with no meaning.
     ENH: Moved accumlator logic to main MI class
     ENH: Allow staggering of accumulations per thread.
     PERF: Zero reset thread buffers during finalize
     BUG: Syntax error in comment
     PERF: Add non-blocking mutex locking.
     ENH: Use TryLock minimize thread stalls
     BUG: ThreadedIndexedContainerPartitioner is inclusive
     STYLE: Remove include_regular_expression from Examples
     BUG: Demonstrate Inv(Inv(T)) != T
     BUG: Ensure Inv(Inv(T)) == T for transforms
     COMP: Valgrind detects uninitialized memory read
     COMP: Missing required base class API component
     ENH: Expand interface for selecting threadpool

Ismael Belghiti (1):

     DOC: Spelling Error in PatchBasedDenoisingBaseImageFilter

Jim Miller (1):

     STYLE: Removing what appears to be a temporary file

Johan Andruejol (1):

     ENH: Fix normalization for null vectors and return the norm

Jon Haitz Legarreta (1):

     ENH: New test for itkLabelShapeOpeningImageFilter

Kent Williams (9):

     COMP: use find_package(VTK COMPONENTS) to specify just needed VTK Components
     BUG: ImageSources/test/CMakeLists.txt incorrect library var reference
     COMP: Fix coverity defects related to RegistrationV4 examples
     COMP: silence warning of vnl_vector_fixed_ref::assert_size
     COMP: Fix various Coverity warnings
     COMP: Fix a typo in an error message print statement.
     COMP: itk::Command-derived class used pointless dynamic_cast.
     PERF: Don't recompute InternalInverse repeatedly
     COMP: Correct orientation/spacing for Philips MultiFrame

Mark Hiner (2):

     ENH: Update SCIFIO remote module hash
     BUG: Fix duplicate variables in Windows

Matthew McCormick (105):

     DOC: Fix itkSetGetDecoratedInputMacro Doxygen macro.
     ENH: Move FFTComplexToComplexImageFilter out of Review.
     ENH: Add VnlComplexToComplexFFTImageFilter.
     BUG: Use fixed seed for Vnl FFT tests for repeatibility.
     ENH: Bump CMakeLists.txt version to 4.7.0.
     BUG: ArchiveTestingData.py future imports must occur at the beginning.
     BUG: Do not run vnl_test_na with broken libc++.
     DOC: Remove Image2.cxx reference from Book 2.
     DOC: Fix Software Guide page overruns in IterativeClosestPoint3.cxx.
     DOC: Remove references to Book 1 sections from Book 2.
     DOC: Make BinaryThresholdImageFilter not floating.
     DOC: Fix Software Guide figure caption for FlipImageFilter.
     DOC: Avoid duplicate figure description in ResampleImageFilter2.cxx.
     DOC: Remove duplicate figure in LaplacianRecursiveGaussianImageFilter2.cxx.
     DOC: ImageRandomConstIteratorWithIndex table reference.
     DOC: Fix Software Guide page overruns in IterativeClosestPoint{1,2}.cxx.
     DOC: Remove duplicate text in LaplacianRecursiveGaussian example.
     BUG: Uninitialized m_TransformDirection in ComplexToComplexFFTImageFilter.
     BUG: Fix offset[2] in PointSetToSpatialObjectDemonsRegistrationTest.
     STYLE: Fix style in VoronoiDiagram2D.
     BUG: Fix invalid assignment of second VoronoiBoundaryOrigin.
     BUG: Bump GCCXML to 2014-08-06.
     BUG: Remove unused m_{SplitEpsilon,SigmoidPrimeOffset}.
     BUG: Fix Win MultiThreader check for successful process creation.
     BUG: Fix VTKPolyDataMeshIO writing for 2D second rank tensor.
     COMP: Fix ImageRegistration8RegisteredSlice.png baseline name.
     DOC: itk::statistics -> itk::Statistics.
     COMP: Fix transform type for ITKv3/IterativeClosestPoint2.
     BUG: Fix invalid assignment of second VoronoiBoundaryOrigin.
     COMP: Improve const correctness of GradientRecursiveGaussianImageFilter.
     BUG: Call clear instead of empty on PatchBasedDenoising EmptyCaches().
     BUG: Fix Size() in ImageToListSampleAdaptor for VectorImage's.
     COMP: ThreadJob NULL not defined.
     BUG: Fix alpha assignment for RGBA TIFF.
     COMP: Remove unused typedefs in LevelSetsv4Visualization.
     COMP: Remove unused typedef's in VtkGlue.
     ENH: Mark BSplineWarping2Test as RUNS_LONG.
     BUG: Fix Nifti IO read with large images.
     COMP: Remove call for non-existent variable in Nifti debugging.
     BUG: Close the file on Read and Write in HDF5TransformIO.
     BUG: Remove InsightLegacy test code from TransformHDF5Test.
     ENH: Add {Set,Get}TransformIO for TransformFile{Reader,Writer}.
     STYLE: Use SeriesUIDContainerType and FileNamesContainerType
     ENH: Allow specification of orthogonality tolerance in rigid transforms.
     BUG: TransformFileReader does not clear its TransformList.
     BUG: Prevent dangling pointer in HDF5TransformIO.
     COMP: Do not use _stat64 with MinGW-32.
     BUG: Improve thread-safety and performance of PCAShapeSignedDistanceFunction.
     DOC: itk::statistics -> itk::Statistics.
     DOC: Remove duplicate text in LaplacianRecursiveGaussian example.
     DOC: Fix Software Guide page overruns in IterativeClosestPoint{1,2}.cxx.
     COMP: Address LaplacianDeformation Doxygen warnings.
     BUG: TransformFileReader does not clear its TransformList.
     BUG: Prevent dangling pointer in HDF5TransformIO.
     COMP: Fix missing prefix in ITKv3ImageRegistration20Test.
     BUG: Do not return SmartPointers in TimeVaryingVelocityFieldTransform
     COMP: Do not wrap the FixedArray of Image SmartPointer's.
     COMP: Add missing wrapping for TransformIOBaseTemplate.
     COMP: Mark DeformableRegistration6Test as RUNS_LONG.
     STYLE: Improve style in BinaryImageToLabelMapFilter.
     BUG: Fix BinaryImageToLabelMapFilter on 1D image.
     ENH: Improve precision of the joint PDF sum
     BUG: Fix BinShrinkImageFilter for different input/output image types.
     COMP: Fix transform type for ITKv3/IterativeClosestPoint2.
     BUG: Use -py3 when building wrapping for Python 3.
     COMP: Add missing wrapping for TransformIOBaseTemplate.
     DOC: Improve ImageRegistration4 grammar.
     ENH: Add IOTransformDCMTK Remote module.
     BUG: gdcm::StringFilter recognizes backslash delimiter.
     DOC: Add migration guide for GDCM Rescale slope intercept apply on write.
     COMP: Remove unused typedef's in GPU code.
     STYLE: Improve style of HoughTransform2DLinesImageFilter example.
     COMP: Use ConceptChecking for IterativeInverse dimension check.
     COMP: Wrap TransformIOBaseTemplate for const SmartPointer.
     COMP: Add warning exceptions for third party pcre, swig, gccxml.
     ENH: Bump ITK version to 4.6.1.
     BUG: Add missing ITK_OVERRIDE to ITKImageeSources module.
     BUG: Remove GaussianImageSource members shadowing GenerateImageSource.
     STYLE: Style fixes to ITKImageSources module.
     BUG: GaussianSpatialFunction and GaborImageSource use SpacePrecisionType.
     BUG: Do not perform itk_download_attempt_check when not building ITK.
     DOC: Update GDCMImageIO rescale slope intercept doc.
     BUG: Only register requestion IO COMPONENT modules.
     BUG: Fix wrapping .i, .idx CMake dependencies.
     COMP: Add VTK Python module when wrapping ITKVtkGlue.
     STYLE: Remove NULL definition in itkVoronoiDiagram2DGenerator.
     STYLE: VoronoiDiagram2DGenerator defines a VoronoiDiagramType typedef.
     COMP: Add missing VTK module dependency for LevelSetsv4Visualization.
     BUG: By default, do not create any fixed parameters.
     STYLE: Remove trivial method comments in itkTransform.hxx.
     BUG: PolylineMask Filter's GenerateData is protected / virtual.
     ENH: Add HigherOrderAccurateGradient Module.
     BUG: Use input RequestedRegion Index in SliceBySliceImageFilter internal.
     COMP: Remove extra semi-colon, variable scope in DCMTKFileReader.
     STYLE: Style fixes for Transform classes.
     DOC: Increase Doxygen LOOKUP_CACHE_SIZE.
     BUG: MatrixOffsetTransformBase::GetFixedParameters not thread safe.
     DOC: Index Wiki examples with Doxygen.
     COMP: Bump SphinxExamples remote module.
     DOC: Index Sphinx examples in Doxygen.
     COMP: Remove old java examples.
     COMP: Remove duplicate DiffusionTensor3DReconstruction example reference.
     COMP: Address GradientAnisotropicDiffusionImageFilter example settings.
     COMP: Bump Sphinx Examples remote.
     COMP: Bump WikiExamples remote.

MetaIO Maintainers (1):

     MetaIO (reduced)

Michka Popoff (40):

     ENH: Fixes for python 3 support
     BUG: Add VTK_VERSION for older VTK versions
     BUG: Improve SWIG version check
     COMP: Add wrapping for ThreadPool and ThreadJob
     COMP: Remove unimplemented DestroyPool method
     COMP: Fix itkVnlComplexToComplexFFTImageFilter wrapping
     COMP: Do not hide pygccxml warnings
     ENH: Update links in readme file
     BUG: Improve SWIG version check
     BUG: Add VTK_VERSION for older VTK versions
     STYLE: Remove trailing whitespaces
     STYLE: Set ITK_USE_SYTEM_ZLIB and ITK_USE_SYTEM_SZIP
     BUG: Fix memory leak in MetaImageIO after exception
     ENH: Add script to update pygccxml from upstream
     BUG: Update VTK minimum version (for release)
     BUG: Fix memory leak in MetaImageIO after exception
     ENH: Remove Sun OS compatibility for the wrappings
     COMP: Fix for conversion to non-pointer like type warning
     STYLE: LabelObject style
     DOC: Remove broken link from LabelObject class description
     ENH: Do not setup the python tests if not asked
     ENH: Add new GetTypes() and GetTypesAsList() methods to the template class
     COMP: Fix CMP0054 warnings in wrappings
     STYLE: Remove old cmake < 2.8.4 specific code
     STYLE: Remove old cmake < 2.8.5 specific code
     ENH: Update to PCRE 8.36
     COMP: Refactor Wrapping setup and fix legacy warnings
     ENH: Add wrapping configuration to ITKConfig.cmake
     STYLE: Some minor code cleanup in the wrapping setup
     DOC: Fix typo in RelabelComponentImageFilter
     ENH: Deprecate VectorResampleImageFilter
     DOC: Add migration guide for ::Zero and ::One
     ENH: Deprecate ::Zero and ::One
     ENH: Add option to disable sorting by size in itkRelabelComponentImageFilter
     ENH: Add Vector and RGB wrapping to linear interpolator
     STYLE: Remove SORT macro in wrappings
     COMP: Fix warning for InterpolateImageFunction wrapping
     COMP: Add a check for Blocks in GPU module
     COMP: Bump SCIFIO to fix test build warnings
     COMP: Fix wrapping of itkImageFunctionBase

Nick Tustison (7):

     BUG:  Need to explicitly specify spline order.
     ENH:  Initializing the transform center.
     BUG:  Need to check the dynamic cast before any calls.
     ENH:  Adding modifications for point set metrics.
     BUG:  Need to specify TInternalComputationValueType for default metric.
     ENH:  Adding sparse points to B-spline field estimate.
     BUG:  Uninitialized variables.

Richard Beare (1):

     ENH: Include TIFF tags in the MetaDataDictionary

Taylor Braun-Jones (1):

     BUG: Fix SliceBySliceImageFilter doesn't propagate information internally

Umang B (1):

     ENH: Use thread pool to dispatch multithreading tasks

Vivien Delmon (2):

     BUG: ExtractImageFilter::CollapseToSubMatrix fix
     ENH: Add a test on extracted directions in CollapseToSubMatrix mode

Vladimir S. FONOV (1):

     BUG: Fixing incorrect MINC style inverse transform


ITK Sphinx Examples Changelog


Arnaud Gelas (12):

     add one example to translate one itk::Image
     add PasteImageFilter example
     fix path in ArchiveBinaryData.py.in
     BUG: error when TEST_IMAGE_PREFIX was used
     fix broken links as detected by linkcheck
     add example for PermuteAxesImageFilter
     Add one example to apply an affine transform given homogeneous matrix
     Add one example to multiply 2 images
     use ITK 4.6.1 for superbuild
     update breathe to 3.1.0
     Add one example to generate slices from volume
     Add one example about RegionOfInterestImageFilter

Brad King (1):

     setup-hooks: Create .git hooks directory if necessary

Matt McCormick (15):

     ENH: Bump ITK Superbuild tag to 4.6.0.
     BUG: Fix ConvertAnITKGrayScaleImageToCVMat compare_to_baseline.
     COMP: Remove breathe link to ConstantPadImageFilter.
     BUG: Fix figure path for Iterative Hole Filling.
     BUG: Evolution.gif needs to be ..only:: html
     COMP: Content not permitted in image:: directive.
     BUG: Require CMake 2.8.6 in CreateNewExample template.
     BUG: Update CreateNewExample.py for new compare_to_baseline syntax.
     COMP: Fix ITKMathematicalMorphology COMPONENT dependency.
     COMP: Fix build as a Remote module.
     COMP: Fix fresh configuration as an ITK module.
     COMP: Fix configuration ITK_WRAP_PYTHON is not defined.
     BUG: Annotate ReadUnknownImageType component type correctly.
     ENH: Bump Superbuild VTK version to 6.1.0.
     ENH: Bump Superbuild ITK version to 4.7.0.

Michka Popoff (15):

     COMP: Fix failing setup of SegmentBloodVessels example
     STYLE: Update title for Apply Affine Transform example
     ENH: Add GeodesicActiveContourLevelSetImageFilter example
     COMP: Fix failing MultiplyTwoImagesTestBaselineComparison test
     COMP: Add images to the MultiplyTwoImages documentation
     COMP: Fix and improve ForwardFFTExample
     COMP: Fix Multiply two images output
     COMP: Update all cmake versions to 2.8.6
     COMP: Fix MultiplyTwoImagesTestBaselineComparison
     ENH: Add infrastructure for Python tests
     ENH: Add example on how to resample a RGB image
     BUG: Add missing images to ResampleAVectorImage documentation
     COMP: Fix path for favicon
     COMP: Fix for CleanQuadEdgeMesh documentation
     BUG: Add missing semicolon to example


ITK Software Guide Changelog


Ali Ghayoor (4):

     ENH: Part one of converting Registration chapter to ITKv4
     ENH: Part two of converting Registration chapter to ITKv4
     ENH: Part three of converting Registration chapter to ITKv4
     DOC: Revise the registration chapter

Christopher Mullins (16):

     COMP: Use RegistrationITKv3 examples with ITKv3_COMPATIBILITY
     STYLE: Use minted to highlight code syntax
     DOC: Add instructions for using ITK from python
     COMP: Sort and run the examples topologically.
     COMP: add_custom_command no longer takes SOURCE parameter
     STYLE: Fix python indentation
     COMP: BuildTexFiles target should depend on SoftwareGuideExamples
     COMP: Update the .eps generation command to use the OUTPUT signature.
     STYLE: Fix quotes.
     DOC: Language edits mostly from Book 2
     ENH: Only flip the images we want to flip
     BUG: Figure overlaps text in 4.3.
     DOC: More language fixes, use minted instead of code tags.
     STYLE: Put a new line before code blocks
     STYLE: Fix margin problems with filenames and floating figure overlaps
     STYLE: Change margins using the geometry package.

Hans Johnson (1):

     ENH: Bring ITK code closer to the 4.7 release code

Matt McCormick (25):

     ENH: Pass PDF_QUALITY_LEVEL in superbuild.
     BUG: Remove unused RunExamples.py imports.
     ENH: Reduce verbosity of RunExamples.py.
     BUG: Do not include RegistrationITKv4 example sources in the build.
     BUG: Fix caption on Confidence Connectened on BrainWeb figures.
     BUG: Bump the ITK superbuild for LaTeX fixes.
     ENH: Add new ISBN numbers.
     DOC: CDash has replaced Dart.
     DOC: itk::statistics -> itk::Statistics.
     ENH: Update ITK logo.
     STYLE: Remove box around CC logo.
     DOC: Document instructions for building from the Docker image.
     DOC: Docker build instruction improvements.
     ENH: New path for starting the docker environment.
     ENH: Change paper size.
     COMP: Improve arguments for GradientAnisotropicDiffusionImageFilter.
     ENH: Bump ITK Superbuild version to 2014-12-03.
     BUG: Add flags for PDF_QUALITY_LEVEL STREQUAL ""
     ENH: Add contributors for print release.
     ENH: Upsample when building with PDF_QUALITY_LEVEL "Printer".
     BUG: Specify cc-by logo size explicitly.
     BUG: Use original ITK configuration images.
     ENH: Use file(COPY to copy over .eps images.
     ENH: Margin tightening.
     ENH: Bump ITK ExternalProject to v4.7.0.

Michka Popoff (5):

     ENH: Use the new licence file for MetaIO
     DOC: Fixes for the ITK 4.7 book
     DOC: Fixes for book1, part1, chapter 2
     DOC: Fixes and improvements for Book 1, chapter 3
     DOC: Minor fixes for Book 1, Chapter 4

Sandy McKenzie (1):

     STYLE: Add new line before code block


ITKApps Changelog


Bill Lorensen (1):

     COMP: Update CTEST_DROP_SITE

Matt McCormick (4):

     COMP: Use ::ZeroValue() instead of ::Zero.
     COMP: Patch FLTK for build against newer freetype.
     COMP: Address %d type for VolviewPlugins.
     ENH: Bump ITK Superbuild version to v4.7.0.