ITK/Examples/WishList/Iterators/FloodFillIterator

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Revision as of 21:10, 6 February 2011 by Daviddoria (talk | contribs)
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This example creates a black image of a 3x3 square. It then uses a flood fill iterator to visit the pixels in this white region (specified by a seed point) and marks them with increasing brightnesses to convey the visit order.

FloodFillIterator.cxx

<source lang="cpp">

  1. include "itkImage.h"
  2. include "itkImageFileWriter.h"
  3. include "itkFloodFilledImageFunctionConditionalIterator.h"
  4. include "itkBinaryThresholdImageFunction.h"
  5. include "itkImageFileWriter.h"
  1. include "QuickView.h"

typedef itk::Image< unsigned char, 2 > ImageType;

void CreateImage(ImageType::Pointer image);

int main( int argc, char *argv[]) {

 ImageType::Pointer image = ImageType::New();
 CreateImage(image);
 typedef itk::BinaryThresholdImageFunction< ImageType, double > FunctionType;
 FunctionType::Pointer function = FunctionType::New();
 function->SetInputImage(image);
 function->ThresholdAbove(100); // we are looking to capture 255
 
 typedef itk::FloodFilledImageFunctionConditionalIterator< ImageType, FunctionType > IteratorType;
 itk::Index<2> seed;
 seed[0] = 5;
 seed[1] = 5;
 
 std::vector<itk::Index<2> > seeds;
 seeds.push_back(seed);
 
 IteratorType it (image, function, seeds);
 it.GoToBegin();
 
 unsigned int counter = 0;
 while ( !it.IsAtEnd() )
   {
   it.Set(static_cast<float>(counter) * 25.);
   ++it;
   counter++;
   }
   
 typedef  itk::ImageFileWriter< ImageType  > WriterType;
 WriterType::Pointer writer = WriterType::New();
 writer->SetFileName("output.png");
 writer->SetInput(image);
 writer->Update();
   
 ImageType::Pointer originalImage = ImageType::New();
 CreateImage(originalImage);
 
 QuickView viewer;
 viewer.AddImage(originalImage.GetPointer());
 viewer.AddImage(image.GetPointer());
 viewer.Visualize();
 return EXIT_SUCCESS;

}

void CreateImage(ImageType::Pointer image) {

 itk::Index<2> start;
 start.Fill(0);
 itk::Size<2> size;
 size.Fill(10);
 itk::ImageRegion<2> region(start,size);
 image->SetRegions(region);
 image->Allocate();
 image->FillBuffer(0);
 // Make a square
 for(unsigned int r = 3; r < 6; r++)
   {
   for(unsigned int c = 3; c < 6; c++)
     {
     itk::Index<2> pixelIndex;
     pixelIndex[0] = r;
     pixelIndex[1] = c;
     image->SetPixel(pixelIndex, 255);
     }
   }

} </source>

CMakeLists.txt

<source lang="cmake"> cmake_minimum_required(VERSION 2.6)

PROJECT(FloodFilledImageFunctionConditionalIterator)

include_directories(/home/doriad/ITKWikiExamples/ItkVtkGlue)

FIND_PACKAGE(VTK REQUIRED) INCLUDE(${VTK_USE_FILE})

FIND_PACKAGE(ITK REQUIRED) INCLUDE(${ITK_USE_FILE})

ADD_EXECUTABLE(FloodFilledImageFunctionConditionalIterator FloodFilledImageFunctionConditionalIterator.cxx /home/doriad/ITKWikiExamples/ItkVtkGlue/QuickView.cxx) TARGET_LINK_LIBRARIES(FloodFilledImageFunctionConditionalIterator vtkHybrid ITKIO ITKBasicFilters ITKCommon )

</source>