ITK/Tcons/Agendas/2011 09 15

How to Join the Tcon

Number to Call

Please be patient, due to some unforeseen circumstances, the call may not start on time...

• 1-800-728-9607 (in the US) or
• +1 9139049873 (international)
• access code 6815251

Webex

• Meeting link
• https://emeetings.webex.com/emeetings/j.php?ED=138191182&UID=482060457&PW=NNzJiNDk1ZGU3

Project Management

• Developers Meeting September 27-28-29
  • NLM
  • Wiki Page

THE END IS HERE !!

• Beta Release Tag

THE ROAD AHEAD !!

• Test, Fix, Merge, for FINAL ITKv4 or DIE !
• FREEZING NOVEMBER 1th 2011

FEM

• Done to Beta Level
• Need to review code coverage
• Disabled Examples must be restored
  • Deformable registration
• Migration pages Missing

Level Sets

• Merged Gerrit Patch
  • 2526
  • And a collection of JIRA tickets
• Done to Beta Level
• Need to review code coverage
• MICCAI Tutorial
  • Provide a couple of examples
• VISUALIZATION code Module ?

Registration

• Merged
  • High Dimensional Optimizers
    • Gerrit 2569
• Transform Patch
  • Remaining JIRA Tickets (~10)
• MICCAI Tutorial
  • Tests / Examples ?

Simple ITK

• Numpy
• Packaging
• MICCAI Tutorial
• Web pages are up
  • http://www.simpleitk.org
  • http://pypi.python.org/pypi/SimpleITK/0.2.0
  • https://sourceforge.net/projects/simpleitk/

WrapITK

• packaging being sync'ed with simpleITK (python currently)
• Next: finish wrapitk integration
• Next(2): C#
• infrastructure: set up a robot build with wrapping (mac)

DICOM

• New roadmap and deliverable to be decided by Alex/steve/STephen: | here

GPU

• Status ?
  • Mac Compilation
  • Scope of filters to support ?
• Patch added today
  • http://review.source.kitware.com/#change,2577

TIFF Update

• Pending warning about 3Gb computation in Windows.
• Need verification when saving images larger than 9Gb.

Numerical Libraries

• Julie Langou Visting Kitware for a Week-long Hackathon.
• Refactor Numerical Libraries
  • Inventory of Numerical Libraries
  • Fourier Transforms
• Avoiding FORTRAN to C translation
• Removing "eispack and "linpack" to be replaced with "lapack" calls
  • provide "lapack" through "lapacke"
• Immediate Targets
  • FFT
  • Linear Solvers for large sparse matrices (for FEM)
• LBFGSB Optimizer was reviewed and it is in good state.
  • There is a new version with improvements under BSD license.
  • We need to provide better examples of use
• ImageRegionIterators were found to have bottleneck in the Increment() method.
• LSQR not used

A2D2 Microscopy Colocalization

• Started Gerrit training: Two Hackathons
• Patches coming into Gerrit

A2D2 on Registration Optimization

• Did Gerrit training: One hackathon

Video Bridge

• Patch in Gerrit
• http://review.source.kitware.com/#change,2733

Dashboard

• New Stronger Warning Settings
  • Problem: Hyper-Abundance of Warnings is killing the CDash Server.
  • Proposal: Activate the warning on selected modules and clean house-by-house...
    • This divide-and-conquer method proved to be successful when cleaning KWStyle issues.

Missing Builds

• Harvard
  • Barracuda
  • Clownfish
• Hooperlab
  • Bubbles
• Kitware
  • Amber12

Bug fix release

• ITK 3.20.1
• Fix Win64 Visual Studio compile issues
  • http://review.source.kitware.com/#change,2142
• Fix GCC 4.6 issues
  • http://review.source.kitware.com/#change,2187
• Pending patch on ImageIO issue raised by Slicer.
  • Bill Lorensen will look at it and potentially put a Gerrit patch.
• Stable release for Slicer to build against
• ITK First: Hold ground on quality control

Schedule

• Transition Plan
• ITKv4 Alpha-09 Tagged

BETA RELEASE

• New Date : September 15th
• SCRUM Process
  • Tools: (demo) https://itk.icts.uiowa.edu/jira/secure/Dashboard.jspa
    • Five Sprints (two weeks each).
      • Two Sprints Left.