TubeTK/Code Optimization in Linux: Difference between revisions
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= Valgrind (KCacheGrind) = | |||
<pre> | |||
valgrind --tool=callgrind --dump-instr=yes --simulate-cache=yes --collect-jumps=yes program arguments | |||
</pre> | |||
== Links == | |||
* http://valgrind.org/docs/manual/cl-manual.html | |||
* http://matt.eifelle.com/2009/04/07/profiling-with-valgrind/ | |||
* http://www.slac.stanford.edu/BFROOT/www/Computing/Optimization/genprof.html | |||
* http://wiki.eclipse.org/Linux_Tools_Project/Valgrind/User_Guide | |||
OProfile | = OProfile = | ||
You can download the following script from this link: [[file:TubeTK_OProfileExampleScript. | The following script demonstrates profiling on linux using oprofile | ||
* OProfile Web Page: http://oprofile.sourceforge.net/about/ | |||
* Compiling: | |||
** To see see function names, you need to compile with debug. | |||
** To see callgraphs, you need to compile with frame pointers (-fno-omit-frame-pointer). | |||
* You can download the following script from this link: [[file:TubeTK_OProfileExampleScript.txt | TubeTK_OProfileExampleScript.txt]] | |||
<pre> | <pre> | ||
| Line 57: | Line 72: | ||
opcontrol --shutdown | opcontrol --shutdown | ||
</pre> | </pre> | ||
[[Category:TubeTK|Code Optimization in Linux]] | |||
Latest revision as of 18:39, 26 July 2013
Valgrind (KCacheGrind)
valgrind --tool=callgrind --dump-instr=yes --simulate-cache=yes --collect-jumps=yes program arguments
Links
- http://valgrind.org/docs/manual/cl-manual.html
- http://matt.eifelle.com/2009/04/07/profiling-with-valgrind/
- http://www.slac.stanford.edu/BFROOT/www/Computing/Optimization/genprof.html
- http://wiki.eclipse.org/Linux_Tools_Project/Valgrind/User_Guide
OProfile
The following script demonstrates profiling on linux using oprofile
- OProfile Web Page: http://oprofile.sourceforge.net/about/
- Compiling:
- To see see function names, you need to compile with debug.
- To see callgraphs, you need to compile with frame pointers (-fno-omit-frame-pointer).
- You can download the following script from this link: File:TubeTK OProfileExampleScript.txt
#! /bin/bash # notes: # opcontrol: controls data collection # opreport: retrieves profile data # opannotate: produce notated source code # configure opcontrol --no-vmlinux opcontrol --callgraph=6 #opcontrol --event=CPU_CLK_UNHALTED:100000:0:1:1 #opcontrol --event=CPU_CLK_UNHALTED:1000:0:1:1 opcontrol --event=default # TODO: could potentially increase count = number of samples to take # start opcontrol opcontrol --reset opcontrol --start # run the test /home/dpace/TubeTKRepo/daniellepace-tubetk-debug/TubeTK-Build/lib/TubeTK/Plugins/tubeAnisotropicDiffusiveDeformableRegistration /home/dpace/TubeTKRepo/daniellepace-tubetk/Data/tubeAnisotropicDiffusiveSphereRegistration_origFixedImage.mhd /home/dpace/TubeTKRepo/daniellepace-tubetk/Data/tubeAnisotropicDiffusiveSphereRegistration_origMovingImage.mhd -n /home/dpace/TubeTKRepo/daniellepace-tubetk/Data/tubeAnisotropicDiffusiveSphereRegistration_normalVectorImage.mhd -w /home/dpace/TubeTKRepo/daniellepace-tubetk/Data/tubeAnisotropicDiffusiveSphereRegistration_weightImage.mhd -d /home/dpace/TubeTKRepo/daniellepace-tubetk-debug/TubeTK-Build/Temporary/tubeAnisotropicDiffusiveSphereRegistration_anisotropic_resultingMotionField.mhd -o /home/dpace/TubeTKRepo/daniellepace-tubetk-debug/TubeTK-Build/Temporary/tubeAnisotropicDiffusiveSphereRegistration_anisotropic_transformedMovingImage.mhd -i 500 -s 0.125 -l -0.1 > anisotropicTestOutput.txt # dump the profiler results opcontrol --dump opcontrol --stop # get the report # Get an overview report of all images - not super helpful, but might as well save it out opreport > completeOverview.txt # Get a report on the samples for all individual binary images (libraries + applications) used by the tubeAnisotropicDiffusiveDeformableRegistration image opreport image:/home/dpace/TubeTKRepo/daniellepace-tubetk-debug/TubeTK-Build/lib/TubeTK/Plugins/tubeAnisotropicDiffusiveDeformableRegistration > anisotropicOverview.txt # Get a symbol report for the tubeAnisotropicDiffusiveDeformableRegistration image opreport -l image:/home/dpace/TubeTKRepo/daniellepace-tubetk-debug/TubeTK-Build/lib/TubeTK/Plugins/tubeAnisotropicDiffusiveDeformableRegistration --demangle smart --debug-info > anisotropicSymbols.txt # Get code annotations opannotate --source --output-dir=annotated --demangle smart # Get callgraph information opreport -l image:/home/dpace/TubeTKRepo/daniellepace-tubetk-debug/TubeTK-Build/lib/TubeTK/Plugins/tubeAnisotropicDiffusiveDeformableRegistration --demangle smart --callgraph > callgraph.txt # TODO oparchive for comparison to changed code # stop the profiler opcontrol --shutdown
